Bombus bifarius (two-form bumblebee): 117216595
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Entry
117216595 CDS
T07537
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
bbif
Bombus bifarius (two-form bumblebee)
Pathway
bbif04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117216595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbif03036
]
117216595
Chromosome and associated proteins [BR:
bbif03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
117216595
REST complex
117216595
Heterochromatin formation proteins
Other heterochromatin formation proteins
117216595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
117216595
NCBI-ProteinID:
XP_033319307
UniProt:
A0A6P8NZD6
LinkDB
All DBs
Position
Unknown
AA seq
1541 aa
AA seq
DB search
MKRVRGLDDVASPAAATLKHSSVSAGSGGGGSLEYHSSSGIGVVVPGQAVRSVASKEMPG
SIQFGTAQAQQQYTGAIVVPTAAPSPIKGSGSAGLTSTCSSSSVNTGGGLHGGIGGGSNH
SMGSQQPTPGTQSQVHSQQQPTIRHKVHSGNVTPLASTPPGTSLGGGSGSQQFQRLKVED
ALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIVGFNTF
LPPGYKIEVQANEQGYAFQVSVSMPSPTATHTCTSLSQHHCTVNVGSPPVASPPTQPAKA
PPVLQIMQGTGNIHHSLANNISNNSLTVHAPSPPPVQAYNNSHVSAAQAQAVSQALSQAQ
DGIPTSGQTQQSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKESGH
MGGTSGSGASSGAKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQQSSLSNKTATV
NDHTTIVKKPLGPKAPYNNSGNISRDLRESSGTSTIERENRDHRDRDRERDRSGIRDINS
VQKFGHNTGQLKRSPSFSPSVTAGNSHHIQHGPPLKKPKVSSMRECVTIAEAGKYGSLND
YAFFDKVRKALRSQEVYENFLRCLVLFNQEIVSKSELVQLVTPFLGRFPELLRWFKDFLG
HLPESSSTNATNASGNLNVEALPNNVVRSHQERPQGDLAMEIDYTACKRLGASYCALPKS
YVQPKCTGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEEFIYRCEDERFELDGVIE
TNASTIRVLEGVHKKMSRMSQEELQKFKLDDCLGGCSPTIHQRALKRIYGDKAADIIDGL
KKNPVVAVPVVLRRLKSKEEEWREAQKGFNKLWREQNEKYYLKSLDHQGINFKQNDVKAL
RSKSLFNEIETLYDERHEQVDDGSGDGQNNSGPHLVLPYKDKSVLDDAANLLIHHVKRQT
AIHKEDKQRIKLLLKHFIPDLFFHPRQELSDDERDEDDEKEDLNVAACSNSQSVTMNTSP
LGGGGLQANRNKAPVSPIPSSTSIKTEPDIKVPIHAMSDDPEEAYTLFMGSNNWYLFLRL
HHILCERLTKMYDRAVALAEEESRYKQQRKESTAVALRLKPKNEIEIEDYYPAFLDMVKN
VLDGNMESTAYEDTLREMFGIHAYIAFTLDKVVTYAVRQLQHLVSDLICQQCMELFQREQ
RQPKESSGAGGLCATAYMRLGAEMSYQRKAEKAMADENCFKIYIYKKDCKITMELLDTEG
DEAMDNSCREREREGVTVSEKWSTYVERFSAPAGQTSPKDTPTLTDNEPTTNHPVSNDQA
ARGGRGRKRKNTDISKKMDGNGWSSLGRILAGRKPVFLYRNIRQWRKKAARMMSASVPNT
NQPDKAAGSTDKEKSLDSVDALLKRPPGLRLADSGDTSDIINSDETQCRFNPNSYQMLYI
ASKEAFLYKQNSFSRARECHPAVTKHLNSKFHQWLAAWVSKNVADVQHRLCQDWLMGRYE
NLIPHKTRVITDNDQTRTPYRQYNRYRVERLQPDPLTEPSV
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgttcgcgggctggacgacgtagcatcaccagcagcagcaacattaaagcac
tcgtcagtgagtgcaggaagtggcggaggaggtagtttggagtaccattcaagcagtgga
ataggcgttgttgtacctggccaagcagttcgatcagttgcttcgaaagaaatgccgggc
agcatacaatttggaactgcccaagctcaacagcaatatactggagcaattgtagtgccg
accgcggccccgtcccccattaagggaagtggatctgcaggactcacttctacatgtagc
agtagcagtgtaaatactggtggaggtttacatggtggaataggtggtggaagtaaccat
agtatgggttcccaacagcctacaccaggaacacaaagtcaggtccatagtcaacagcaa
ccaacaataaggcataaggttcattctggcaatgtaacaccattagcttctaccccacca
ggcacaagcctaggtggtggcagtggttcccaacaatttcagagattaaaagtagaagat
gcattatcttatttagatcaagtaaagtacaaattcagtgatcagccccaggtgtataat
gatttcttggatattatgaaagaatttaagtctcaaagcatagatacaccaggagtaata
acaagagtgagccatttatttaaagggcaccctgaacttattgttggtttcaataccttt
cttccacctgggtacaaaatagaggtgcaagcaaatgagcaaggatatgcatttcaagtg
tcagttagtatgccaagtccaacagcaacacacacttgcactagcttgtcacagcatcat
tgcactgtgaatgttggttcacctcctgttgcaagtccaccaacacaaccagcgaaagct
cctccagtattgcagataatgcaagggaccggaaacatacaccactctctggcaaataat
atatcgaataatagtttgacagtacatgcaccttcaccaccaccggtacaggcatacaat
aattcacatgttagtgcagctcaagctcaggctgtgagtcaagcgttgagtcaagcacaa
gatggtatacctactagcggacaaactcaacaaagccaaccagttgagtttaatcatgcg
attaattatgttaacaaaattaagaatcgattccaaggtcaaccagacaagtataaaaga
tttttagaaattctacatacttatcagaaagagcagcgaaatttaaaagaatctggacac
atgggtggtacgagtggatctggtgcatctagtggggcaaaacatttaacggaggcagaa
gtttatagccaagttgccaagttatttgaaaatcaagaagatttgctggctgagtttgga
caatttttgccggatgctactaatcaacagagttcgttgagtaacaagactgctacagtt
aacgatcacacaacaattgtcaagaaaccgttgggacctaaagcaccttataataattcg
ggaaatatttcgagagatcttcgagaatcgagcggtactagtacaatagaacgcgaaaat
cgcgatcatagagatcgtgaccgagagcgagatagatctggtatacgagatattaatagc
gtacaaaaatttggtcacaatacgggacaattgaaaagaagtccgtcgttttcgccttcg
gtaacagctggaaactctcaccatatacagcatggtccacctctgaaaaagcctaaagta
tcgtctatgcgtgaatgtgttaccatagccgaagctggaaaatatggcagtctcaatgat
tatgctttcttcgataaggttcgtaaagcgttgagatcgcaagaagtatacgaaaatttc
cttagatgtttggttttgtttaatcaagagatagtttctaaatctgagttggtgcagtta
gtaacgccatttcttggtcgttttcctgaactattgcggtggtttaaagatttcctgggc
cacttgcctgagtcttctagtaccaacgcaacaaatgcaagtggcaatttaaatgttgaa
gcgctaccaaataatgttgtacgaagtcatcaagagagaccgcaaggtgatctggcgatg
gaaattgactacacggcatgcaagcgtctaggggcatcatactgtgcgttaccaaagtct
tacgttcaaccaaagtgtacaggaagaacgcaactgtgtaaagaagttctcaacgataca
tgggtttcattcccgacttggtcagaagatagtacattcgtaacatccaggaaaactcag
tacgaggaattcatttatcgttgcgaagatgaacgatttgagttggatggcgtaatagaa
actaacgcgtcaacgatcagagttctcgagggtgtccataagaaaatgagtagaatgagc
caagaagaacttcagaaattcaagctcgacgattgtctcggtggttgttcgcctacaatt
catcagagagccttgaagaggatatacggcgataaggcggctgacattatagatggtctt
aagaaaaatcctgtagtagcagtaccagtagttcttcgtcgattaaagagtaaggaagaa
gagtggcgggaagcgcaaaaaggtttcaataaactctggagagaacaaaacgaaaagtac
tacttgaagtctctggatcatcaaggtatcaatttcaagcagaacgatgttaaggcccta
aggtccaagagcctatttaatgaaattgaaacgttatacgatgagagacacgagcaggta
gacgatggtagcggggatggtcaaaataatagcggtccacaccttgtattaccttacaaa
gataagtctgtcctagatgatgcagctaatcttcttatccatcatgtgaagcgtcaaacg
gccatccacaaggaagacaagcaacgaataaagcttttgttgaagcattttatacctgat
cttttcttccatccacgccaggaactaagtgacgatgaaagggatgaagacgatgagaag
gaagatctcaatgtagcagcgtgtagtaattctcagtcagtaacgatgaatacctctccg
ttgggtggtggtggcctccaagcaaataggaataaggcgccggtatctccgattccgtct
tccacgtctattaaaaccgaacctgatatcaaagtaccgatccatgcgatgtcggatgat
cctgaagaagcgtacacgctcttcatgggtagcaacaattggtacctttttttaaggtta
catcatatattatgtgaaagattaacaaaaatgtacgaccgggctgtggctcttgctgaa
gaggaatcacggtacaaacagcagcgtaaagagagcacagctgtcgcattacggttgaaa
cctaaaaatgaaattgaaattgaggattactatcctgcatttttggatatggttaagaat
gtgctagacggtaatatggaaagtaccgcatatgaggataccttacgagaaatgttcggt
attcacgcatatatcgcttttacgttagataaggttgtaacatacgctgtgagacaatta
cagcatttggtctcagatcttatatgccagcagtgtatggaattattccagcgagagcaa
cgacaaccgaaagaaagtagtggtgcaggtggtttatgtgctacagcatacatgagactc
ggtgcagagatgtcgtatcagcgtaaagctgaaaaggctatggcggacgaaaattgtttt
aaaatatacatttataagaaagactgtaaaataacaatggaattgttggatacggaaggt
gatgaagcgatggacaacagttgtagggaaagagaaagggaaggagttacggtatctgaa
aagtggtctacatatgttgagaggttttctgctccagctggtcagactagcccgaaagac
acccctaccttaacagacaatgagccaacaaccaatcatcctgtgagtaacgaccaggca
gcaaggggggggaggggcagaaagcgcaagaacactgacattagcaagaagatggatgga
aatggttggagttctttaggcagaatcttggcaggacgtaagcctgtatttctttaccgt
aatattagacagtggaggaaaaaagctgcaagaatgatgtcagcatcagtgcctaacacc
aatcaaccagataaagcagcaggatcaactgacaaagaaaaatcactggattctgtggat
gcgcttctaaagcgacctcctggtttaagattagcagattctggggatacatctgacatt
atcaattccgatgaaacccagtgtagatttaatcccaatagttaccaaatgctttatatt
gctagtaaggaagcattcctgtataaacaaaattctttcagtcgtgccagggagtgtcat
ccagctgttacaaaacacttgaattcaaagttccatcaatggctggcggcttgggtatcc
aagaatgttgcagatgttcaacaccgattatgtcaggattggttgatgggacgttatgaa
aacttaattcctcataaaacacgagtgatcacggacaatgatcaaacgagaacgccttat
cgacaatacaatcgttatcgagtggaacgcttgcaacccgatcctctgacggaaccaagt
gtataa
DBGET
integrated database retrieval system
