Babesia bigemina: BBBOND_0105750
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Entry
BBBOND_0105750 CDS
T08062
Name
(RefSeq) LSM domain containing protein, putative
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
bbig
Babesia bigemina
Pathway
bbig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBBOND_0105750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbig03019
]
BBBOND_0105750
Messenger RNA biogenesis [BR:
bbig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BBBOND_0105750
mRNA degradation factors
5'-3' decay
Lsm complex
BBBOND_0105750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
24562807
NCBI-ProteinID:
XP_012766452
UniProt:
A0A061D0B2
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Position
I:complement(<1249424..>1249997)
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AA seq
167 aa
AA seq
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MDDDVATARSDQHSKQQWIWVVEDELGSLIWVTLRDETYYVGIFKSFDQYGNLVLTDAVR
KVIVHSQRVFSDVYCGNLIIRGESIAYFCGLDATSYLNTFKYNSTFDHSRLLQVARKRNM
RMMPQPMMPKLKYVELDEALALLKEEQEQFPTKKHIFSDMLGNDAFA
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgatgtggcaaccgcgcgcagtgaccagcatagcaagcagcaatggatttgg
gtcgtagaggacgaactcggatccttgatctgggttactcttagagacgaaacctattac
gtgggtatttttaaaagctttgatcaatacgggaaccttgtgcttaccgacgccgtcagg
aaggtcatcgttcattcgcaacgagttttcagcgatgtgtattgcggtaatttgataata
cgcggtgagagtattgcctatttctgcggacttgacgcgacaagctacctgaataccttc
aagtacaacagcacattcgatcacagtcgacttctacaagttgcacgcaaacgcaacatg
agaatgatgcctcagcctatgatgccgaagctgaagtacgtcgaacttgatgaagcgctt
gccctgttgaaggaagaacaagagcaattcccgaccaagaagcatatattcagcgatatg
cttgggaacgatgcgtttgcgtag
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