Babesia bigemina: BBBOND_0106190
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Entry
BBBOND_0106190 CDS
T08062
Name
(RefSeq) DNA polymerase delta subunit, putative
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
bbig
Babesia bigemina
Pathway
bbig03030
DNA replication
bbig03410
Base excision repair
bbig03420
Nucleotide excision repair
bbig03430
Mismatch repair
bbig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBBOND_0106190
03410 Base excision repair
BBBOND_0106190
03420 Nucleotide excision repair
BBBOND_0106190
03430 Mismatch repair
BBBOND_0106190
03440 Homologous recombination
BBBOND_0106190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbig03032
]
BBBOND_0106190
03400 DNA repair and recombination proteins [BR:
bbig03400
]
BBBOND_0106190
Enzymes [BR:
bbig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBBOND_0106190
DNA replication proteins [BR:
bbig03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
BBBOND_0106190
DNA repair and recombination proteins [BR:
bbig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
BBBOND_0106190
MMR (mismatch excision repair)
DNA polymerase delta complex
BBBOND_0106190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
divDNApol
REV3_N
SRP1_TIP1
Imm5
Motif
Other DBs
NCBI-GeneID:
24562851
NCBI-ProteinID:
XP_012766496
UniProt:
A0A061D9D7
LinkDB
All DBs
Position
I:complement(1342160..1345753)
Genome browser
AA seq
1071 aa
AA seq
DB search
MATPTQYQDAVNVQSLRTLDGVNCHEFFQRFSRTPVNVDSLREIIMFQTDADYTSRFERV
DMDDCSSIMDSSRSQPKFAEVPVIRLYGVTRDQHSVLVNVRKFMPYFYVEKPHNFREEHI
PLLMDFFNKHLMDQPAFKKTCRFVVNIKVVRIKPLMTYQPNGERDFLKITTTLPRMVAAL
RSFLESGVALPVMDLPGSGNTMRISFPRQVCEANLPYVLRFLLDANITGGCWLQLPEGTF
TVEKNKSSHCSIEVTTDFENLKPMPIEGEWQSIGPIRTLSFDIECVKFTGPGFPNANNDP
VIQIASVLHTHGDKLDTAQKFVFTLNECDALHGAHVLCFDREEDLLLAWKLFFTAVDPDF
LTGYNIVNFDIPYLINRANALHLEKFTQLPRIARINTSVRDVIQSNNTLGTYENKEINVE
GRIIFDVYDLVRRDHKLKSYTLNYVSFEFLKQQKEDVHHSTLSKLQLGSPADRRRIASYC
LKDSVLPLQLIDKLLLLYNYVEMARVTFTPIKMLINRGQQIRVTMQIYSQCKLMGYAVPV
VNAAQRGWSNEGTYEGGTVLDPQKGYHRNPIAVLDFQSLYPSIMIAHNLCYSTIVPPSDI
ARYSPDDLTSVPGHPGLHFIKAHVRKGMLPLIVEKLIEARKKTKEEMKTCTDPILKSVLD
GRQLALKITTNSVYGYTGASTSGFLPCVEVATAITSFGRFMIVNTKEKIEKYFTLANGYE
ADAKVVYGDTDSVMINFGCKEISRAIELGVEAATKVTSEAVKPITLVFEKVYLPLLLLAK
KRYAGLYYTNAKTYDKIDCKGIETVRRDFCLLVQQMMEKILHMLLVDLDLNGAIEFVKSK
ISQLLRNEIDISLLVVTKSLGKVDYDARLPHVELAKKLRNRDPGKAPSVGDRVSYLIVKG
TKGQPQFDRAEEPLYVVENNIPVDTQHYLDAIKSTLMRIFEVIMPNPESLFSGEHTRYIT
MSSSCDSALSMFMKKVERCLGCKSVIKVPPFCDHCSKSKRQQVMLQKFEERRQKEADYFE
LWSQCQRCQGSLHNEVICDNRDCPIFYKRVRTGKVLTALENTFQSLHLEYT
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccctacgcagtatcaggacgcggttaacgtccagagcttgcgcacgctcgat
ggagtcaactgccatgaatttttccagcgcttctcgcggacaccggtcaacgtggactct
ctccgcgagattattatgttccaaaccgatgcggattacacaagccgctttgaaagggtc
gatatggatgactgttccagtatcatggacagcagcagaagccagccgaagttcgcggaa
gtgcccgtgatccgcctgtacggtgtgacacgggatcagcacagcgtgctggtaaacgtg
cgcaagttcatgccatacttctacgtcgaaaagcctcataacttcagggaggaacacata
cccttgttgatggacttcttcaacaagcacctgatggaccagccggccttcaagaagacg
tgccgctttgtcgtgaacatcaaagtcgttcgcattaaacccctcatgacctaccagccc
aacggcgagcgcgacttcctgaagatcacaacgacgctcccgcgcatggtcgcagcactt
cgtagcttcttggagtcaggggtggcactgcccgtgatggatctgccgggcagcggaaac
actatgcgcatttcgtttccacgtcaggtctgcgaagcgaacctgccttatgtcctgagg
tttttgctggacgctaacatcacaggcgggtgctggttgcaactgccggagggaacgttc
acagtcgagaaaaacaagagcagccactgcagcatcgaggttacgaccgacttcgagaac
ctcaagcccatgccaatagaaggcgagtggcagtcgataggacccatcaggactctttcg
ttcgatattgagtgcgtcaaattcacgggtcccggtttccccaatgccaacaacgacccc
gtgatccaaattgcatctgttctccacacccatggcgacaaactggataccgcgcagaag
tttgtattcacgcttaatgaatgtgacgcgctgcacggcgcacatgtgctctgctttgac
cgggaggaggacctgcttttggcgtggaagctctttttcactgcagtggaccctgacttc
ctgacgggatacaacatcgtgaacttcgacattccgtacctcatcaaccgcgcgaatgcg
ctgcatctggagaagttcacgcagctgccgcggatcgcacgtatcaacactagtgtgcgc
gacgtcatacagtccaacaacacgctcggcacctacgagaacaaggaaatcaacgtagag
ggacgcatcattttcgatgtttacgacctcgtgaggagagaccacaagctcaagtcgtac
acgctcaactacgtttccttcgagttcctcaagcaacagaaggaggatgtgcaccactcc
acgctatcaaagctgcaactgggctcgcctgccgacaggcgacgtatcgcaagctactgt
ctgaaggattccgttctcccactacagctcatcgataagctcctgctgctgtataactat
gtcgagatggcaagagtaaccttcactcctatcaagatgctgatcaaccgaggacagcaa
atcagagttaccatgcagatctacagccagtgcaaactgatggggtacgctgtacccgtc
gtcaacgctgcacagagaggatggtcaaatgaaggcacatacgaaggtggaactgtcctt
gacccgcagaaaggataccacagaaatcctattgcggtgctggatttccagtcgctatac
ccctcgatcatgatagcgcacaacctgtgctactccaccattgtaccgccttccgacatt
gccaggtattctccggatgacctaacgtcggtaccaggacatccggggctgcatttcata
aaggcgcacgtgcgcaaggggatgcttccacttattgttgagaagctaatcgaggcgcgc
aagaaaaccaaggaggaaatgaaaacttgtacagatcccatcttgaagagcgttctcgac
ggcaggcagctggcgttgaagatcacaacgaattccgtgtacggatacaccggtgcctcc
acaagtggcttcctcccctgtgtggaagtcgccacggcgatcacatcgttcggtcgtttc
atgatcgtcaacacgaaggagaagattgaaaagtacttcacgctagccaatggctacgag
gccgacgcgaaggtcgtctacggtgataccgattccgtcatgatcaacttcggatgcaaa
gagatatcgcgagccatcgagcttggtgtagaagccgccaccaaggttaccagtgaggcc
gtaaaaccaatcacgctcgttttcgagaaagtgtacctgccgctgctgcttctggccaag
aagcgttacgctggcctgtattacacaaatgcgaaaacgtacgacaaaatcgactgcaag
ggcattgaaaccgtcaggcgtgatttctgcctcctcgtccaacagatgatggaaaaaatc
ctgcacatgctgctggtcgaccttgacctgaacggtgcgatcgagttcgtcaagagcaag
atcagccaacttctgcgcaacgaaatcgacataagtcttctggttgtcaccaagtcactt
ggaaaggtggattacgatgcgcgcttgccgcacgtagagcttgctaaaaagctccgcaac
cgtgaccccggcaaggcgccatccgtgggagaccgtgtcagctacctcattgtaaaaggc
accaaggggcaacctcagtttgacagagcggaagagccgctgtatgtagttgagaacaac
attcccgtggatactcagcactacttggacgcgatcaagtcgacccttatgcgtatattc
gaggttatcatgcccaacccggaatcgctattcagtggggaacacactcgctacatcacc
atgagctcctcatgcgacagcgcgctctcaatgttcatgaagaaggtcgagcggtgcctc
ggttgcaaaagcgtcatcaaggttccacccttctgcgaccactgtagcaagagcaaacgg
caacaggtgatgctacaaaagttcgaagagcggcggcagaaagaggccgattacttcgaa
ctctggtcgcagtgccaacgctgccagggcagcttgcacaacgaggtaatctgcgacaac
cgcgattgccccatattctacaagagggtacgaactggaaaggtgctcactgctctggag
aatacgttccaatcccttcatctggagtacacgtga
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integrated database retrieval system
