Babesia bigemina: BBBOND_0106850
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Entry
BBBOND_0106850 CDS
T08062
Name
(RefSeq) tRNA-intron endonuclease catalytic domain-like superfamily protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
bbig
Babesia bigemina
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbig03016
]
BBBOND_0106850
Enzymes [BR:
bbig01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
BBBOND_0106850
Transfer RNA biogenesis [BR:
bbig03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
BBBOND_0106850
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Imm1
Motif
Other DBs
NCBI-GeneID:
24562917
NCBI-ProteinID:
XP_012766562
UniProt:
A0A061D0Q0
LinkDB
All DBs
Position
I:<1478941..>1479308
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AA seq
110 aa
AA seq
DB search
MCRDNSVVYRDLSAKRLKVKDGMHYGADLVIYEGDPRECHSYALIYVKHDGQEIPAQSVV
RWTRVAAAAKKRVRNAKLKRFHITSQAILALVDCASATVKYASIDRLKLA
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgcgataacagcgttgtgtaccgcgacctcagcgccaagcgcctgaaggtcaag
gacggaatgcactacggagctgacctggtcatttacgagggcgacccccgggagtgccac
agctacgcgctcatctacgtcaaacacgatggccaggagattccggcgcaatcggtcgtt
agatggacacgcgtggccgccgccgcgaaaaaaagggtgcgtaacgcgaagctgaagcga
ttccacataacttctcaggctatattggctctcgtcgactgcgccagcgcaaccgtgaag
tacgcatccatagacaggcttaaattggcgtag
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