Babesia bigemina: BBBOND_0110050
Help
Entry
BBBOND_0110050 CDS
T08062
Name
(RefSeq) snf2-related chromatin remodeling factor SRCAP, putative
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
bbig
Babesia bigemina
Pathway
bbig03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
BBBOND_0110050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbig03036
]
BBBOND_0110050
Chromosome and associated proteins [BR:
bbig03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
BBBOND_0110050
SWR1 complex
BBBOND_0110050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
24563248
NCBI-ProteinID:
XP_012766893
UniProt:
A0A061D3R2
LinkDB
All DBs
Position
I:complement(2231906..2237539)
Genome browser
AA seq
1877 aa
AA seq
DB search
MQNMGAQVVNYTSPGDINAAQLGDQSANAMVPRQSQLSQMTVPGVHGSQLVAPYAVSNVV
HLPAAAVAAGHVVLMGYGAHPVPTYPLGVGEAYPQLAQFDSQNSTRRFGSTSIEGDAAYV
NMPLGAQYPQPEAPLGIAPTMPNASKESTPRIASLPESPSAEAAVSSPNAASIAAQPQGD
TNPLPPQHRDAPQEPTPDCASSELDHARHLRKVKVRRHASSESSDSLAPLPFPSGKAGAA
KWWGIKVNIEEEFRRLLPHMPQNTDELIAMAKPHVDIELSFFTELGGIYKEFEDETAMIT
ENLDTLRKQLNELHILMGRTVPSKLTEPIKIHDLSIWEPVLKEMNDFQDLVDYEHREKRR
KFKAISAAAQKQASKFENRKMALELDEIKQRKQQCKTVANAIAIYWKKIERFAWERMKRD
LQATLIEKKRMRLDKFVEDAIKLSITKNDKVRADGKMKRESHDIKRQHTDEVTDEPASSV
KTADHGEPRTDYVKEEFVKVERRDAGSPSTASDTTRDDGATKGVADDEFVISEEMKRMER
DDALLDMAMEKEEQLDEAAGSQTKELNALEDDLNLPIEEILRRYREEEEKFKEEHDISSH
SEADDGTEMSSSEHSDNELRSEEENDGGDEMDVDDEDGSEDETDSEDEKGDKELVPPQSL
AATRSKRHRPESFTATPDAAKGESREDTKSGSQEGGKDDMEAEFTLGDDRFKEQEDEDLH
LDEAISDEHSDNETGKQERVKEISALEEDANLPIEELIARYRATGGYGESSDDMSVEETE
SQTASDSEGDDAKTVDGSKEDEFSGEAERDDSTAESSADDEDAVQVPSLIRATLRPYQID
GLRWLASLYRKGSNGILADEMGLGKTLQTIALLAHLACDHGNWGPHLIVVPTSVLLNWEM
EFKKFCPGFMIVSYYGSPAERAKKRIGWNKEHAFNVCIASYATVVQDSYILKRKSWVYMV
LDEAQNIKNFHSKRWQTLLTFNTEGRILLTGTPLQNSLQELWSLMHFILPDVFTSHSEFK
EWFSDPLTESIEREQMNGEGNQQDLQTSHLVQKLHTVLRPYLLRRLKKDVEKQMPSKYEH
VIKCYLSRRQRVLYDEFISSRSAVEALKNPNYRSMLFVLMQLRKICNHPDQLQSRPVETP
YYDPAMMENVAFPMMFLLPELRRGARLYHHDVIDMRVHPSETLPIMVGARGHQDRVVLPP
SFVRSFRGSKVQFQRVFRQNNNAYDGDVAQLPVVSRFPISKCLLSRKSGGRRKLTLSGFL
VEHMLSGNPFEDIRRRHMRCSPTRRASVGREYDQTLGPSISITASSCAFSESDATSTNFG
FHDRFQQVGNGIVAMALDSGRSVSTSSPANAVMQDIDPFVNIPTPPHHAGPMMHNMDYFL
PTSDISDVSDFATESNYVVCTTDDATHDVDPTVMHEPKYFARQIDDSNVVVNKRELLEVN
DSFLLNKFTIDRRPKPKAEFFQKIIAPTVDDVVERNWWMLSRFVCTTGKVVECNPRRVVM
VGQGGVAWNCRQEATAQRIHSKLQRPSSFRYFKETKCSIEHARGLQKVLFPPRSLLHDDC
GKFLVLGRLLKRLKSEGHRCLLYTQFSKMLDILENWINFMGFTYVRLDGSTKVDMRQRIV
TKFNENEKIFLFISSTRAGGVGLTLTGADTVIFYDTDWNPAMDRQAMDRCHRIGQTREVN
VYRLISEHTVEENIWRKQLQKRRLDDIVVDKGNFDSEHHNWFSNVDTLMTILKQQTAEGR
ENATDDDDIYGKKVLHESQAPEMDAAIGHHGPPPRVVNMLVEAEDEDDANALKNRSKEAR
SANKDFQDFSGDMISSMPALVAYSIQLLLNYLTPTLIAQRDEMKVKIKVESMDSAVEEDS
ESSASEVGYGYDSESSE
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatatgggtgcgcaggtggtgaactacacctcgcccggggatataaatgctgca
cagctaggcgaccaatcggcaaatgcaatggtcccaaggcagtctcagctttcgcagatg
acggtgccgggcgtgcacggttcccagctcgttgccccctacgccgtctccaatgtagtg
cacctgccggcggcagccgttgcggcaggccacgtggtgctgatgggatatggcgcacat
cccgtgccaacttacccgttgggtgtgggtgaggcatatccccaacttgcgcaatttgac
tcgcaaaatagcaccaggaggttcggcagcacttcgatagaaggcgacgctgcgtacgtc
aacatgccgttgggggcgcagtaccctcaacctgaggcaccacttggcatagcgcctaca
atgccgaacgcgtcaaaggagtctacaccgagaattgcttcgctacctgaatcgccgtcg
gccgaggcagccgtatcgtcgccgaatgcagcgtcaatagccgcgcaacctcaaggagac
acaaatccgctgccacctcagcacagagatgcgcctcaggagccgacgccggattgtgca
tcgtccgagttggatcatgcgaggcatttacggaaggtcaaagtgagaaggcacgcatcg
tcagaaagcagtgacagtctagcgcctcttccattccccagcggcaaggctggagctgcg
aagtggtggggaatcaaggtcaacatcgaggaggagttccggcggctgctgccgcatatg
ccgcaaaacacggacgagctgatcgctatggccaagccacacgtggacatcgagttgagc
ttctttacggagttagggggcatttacaaggagttcgaggatgagacagcgatgatcacc
gaaaatttggacacgctacgaaagcagctcaacgaattgcacattttgatgggacgcacc
gtgcccagcaagctgaccgaaccgataaaaatacacgacctatcgatttgggagcctgtg
ctcaaggaaatgaacgacttccaggacctggtcgactacgaacaccgggaaaagcgacgg
aagttcaaggcgatttcggcggccgcgcagaaacaggcgtccaagttcgagaaccggaaa
atggccctggaactggatgaaataaagcagaggaagcaacagtgcaagactgtggctaac
gccatagcgatctactggaagaaaatcgagcggttcgcctgggagcgtatgaaacgtgac
ctgcaggccaccctcatcgagaagaaacgcatgaggctggacaagttcgttgaagacgcc
attaaactctcgattaccaagaacgacaaggtcagagctgacggcaagatgaaaagggag
tcccacgatatcaagcggcagcacaccgacgaggtaacagatgaacctgcttcaagcgtg
aaaacggcagaccatggcgaaccgaggactgactatgtaaaggaggaatttgtgaaagtg
gaacggcgcgacgcaggctctccttccacagctagtgataccacccgcgacgacggtgca
acgaaaggcgttgctgatgacgaatttgtcatatccgaagagatgaagcggatggagcgc
gacgacgcgctgctcgacatggccatggagaaggaggagcagctcgacgaggctgctggt
agccaaactaaggagctgaatgcccttgaggacgacctgaacttgccaatcgaagaaatt
ctgcgccgttacagggaggaagaggaaaagtttaaagaggaacacgacatctcatcgcac
tccgaggctgacgacgggacggaaatgagttcgtctgaacacagcgacaatgaactgcgt
tccgaggaagaaaatgacggaggggatgaaatggacgtcgacgatgaagatggttcagaa
gacgagacagactctgaagacgaaaaaggtgacaaggaactggttcctccccaatcgttg
gccgcaactcgaagcaaacggcatcgcccagaaagtttcaccgcaacgccagatgcagcg
aaaggcgaatcgcgcgaggatactaagtcagggtcgcaagagggtggtaaagatgacatg
gaggctgaattcacactgggggatgacaggttcaaggagcaggaggacgaagatctgcac
cttgacgaggcaataagcgatgagcactccgacaacgaaactggcaagcaagagcgcgtc
aaggagatatcggctctggaggaagatgcgaacctgcctatagaggagctcatcgctcgg
tacagggctaccggcggatacggcgagagtagcgacgacatgtcagtggaagaaaccgag
tcacagacagcgtccgattccgaaggagacgatgccaagaccgttgatgggtcgaaggag
gatgaattcagtggtgaagctgaacgtgacgattccacggcggagtcgtctgcagacgat
gaagatgctgtccaggtgccgtctctaatccgggccacgttgcggccataccagattgac
gggttgcggtggctggcttcgctatatcgcaaaggttccaacggcatcctggcggacgaa
atgggactgggtaaaactctgcagacaatcgccttattggcgcacctggcttgtgaccac
ggcaactgggggccgcacctcatcgtcgtgcctacgtccgtgctgctgaattgggagatg
gagtttaagaagttctgcccgggtttcatgattgtttcgtattacggttcgcctgctgag
agggcgaagaaacgtatcgggtggaacaaggagcatgcgttcaacgtgtgcatcgcgtca
tacgccactgtcgtgcaggactcctacattttgaagcgtaagagctgggtgtacatggtt
ctggatgaggcacagaatatcaaaaacttccactccaaaagatggcagacgttgcttacc
ttcaacaccgagggtcgtattctgctcacaggaaccccgctacaaaactcgctgcaggaa
ctgtggtcgctcatgcatttcattctgcccgatgtgttcacgtcgcactcggagttcaag
gagtggttcagcgaccccctcactgagtccattgagcgggaacagatgaacggggagggg
aaccagcaggacctccagacttcccaccttgtccaaaagctgcacacggtgctccgaccg
tacctgttgaggcgccttaagaaagacgtggagaaacagatgccttcgaagtacgagcac
gtgatcaagtgctacctgtcccgcaggcaaagggtgctctacgacgaattcatatcgagt
cgcagcgcagtggaagcgctgaagaaccccaactacagatcgatgctgttcgtgctaatg
cagttgaggaagatttgcaatcacccagaccagctgcagtcaaggcctgttgaaacgccg
tattatgaccccgccatgatggagaacgtggctttcccgatgatgttcctattaccggag
ttgcgacgtggagccagattgtaccaccatgatgtcatcgatatgcgggtgcacccgtct
gagacgctacccataatggtgggcgccaggggccaccaagaccgtgtggtcctgccgccc
tcgtttgtcagatccttccgaggcagcaaggtgcagttccaacgcgtttttaggcaaaac
aacaacgcatacgacggagacgtggcccagctacctgtggtgtcccgattcccgatttcc
aagtgcctgcttagtcggaaatcaggtggaaggcggaaacttacgctttctggattcctc
gtcgaacacatgctttcgggcaacccattcgaagatattagacggcgccatatgcgttgt
tcgccaactagacgtgcgtcggtagggcgcgaatacgaccaaactctggggccgtcgatt
tcaatcacggcttcctcttgcgccttttcggaatccgatgccacctcaacaaacttcggg
ttccacgacaggttccaacaagtaggtaacgggatcgtagccatggccttagacagcgga
cggtctgtcagtacgagcagccccgccaacgcagtgatgcaagacattgatccattcgtc
aacattcccacacctccccaccacgcagggccgatgatgcacaacatggattactttttg
ccgacgagcgatatatccgatgtttcggactttgctacggagtccaactatgtagtttgc
actaccgatgatgcaacccatgacgtggatccgaccgtaatgcacgaacccaagtatttc
gctcgacaaatcgatgactccaacgtagtagtgaataagcgggagctgctggaggtgaac
gacagtttcctgctgaacaagttcaccatcgatcgacgcccgaagcccaaggccgaattc
ttccagaaaatcatagcgcccaccgtggacgacgtggtggaacgcaactggtggatgttg
tcacggtttgtgtgcactaccggcaaggttgtggagtgcaacccgaggcgggtcgtcatg
gttggccaaggaggtgtggcctggaactgccggcaagaggccacggcacagcggatccac
agcaaactacagcggccttcatcattcaggtacttcaaggaaacgaaatgcagcattgag
cacgcccggggactgcagaaggtgctcttcccgcctcgaagcctgctgcacgatgattgc
ggcaagttcctggtcctggggcgtctgctgaagaggttgaagagcgaggggcacaggtgc
ctgttgtacacccagttttccaaaatgctggacatcctggaaaactggatcaacttcatg
gggttcacatacgtcagactcgacgggtccaccaaggtggacatgaggcagcgtatcgtc
acgaagttcaacgagaacgagaagatattcctgttcatctcctccacacgtgctggtggt
gtaggtctgacgctgacgggtgccgacactgtcatcttctacgacaccgactggaacccg
gcgatggacaggcaggctatggacaggtgccaccgtatcgggcagacgagggaggtcaac
gtgtaccgcttgatcagcgagcacaccgtcgaggagaacatctggcgcaagcagctgcag
aagcggcggctggacgacatcgtggtggacaagggcaacttcgacagcgaacaccacaac
tggttctccaatgtcgacacgctcatgaccatcctgaagcagcagacggcagagggccgc
gaaaacgccacggacgatgacgatatctacggcaaaaaggtgttgcacgaatctcaagcg
ccggagatggacgccgcgatcggccatcatggcccgccgccgagggtggtgaacatgctg
gtggaggcggaggacgaagacgacgccaacgcgctgaagaaccgcagcaaggaggcgagg
agcgcgaacaaggacttccaggacttcagtggcgacatgatttcctcgatgccggcgctg
gtcgcctattccatccagctcttgctgaactacctcacgcccaccctgatcgcccaacgc
gatgagatgaaggtcaagatcaaagtggagtccatggactctgccgtggaggaggactcc
gaatcgtcagcctccgaggtcggctacgggtacgactcggagtcgagcgagtag
DBGET
integrated database retrieval system
