Babesia bigemina: BBBOND_0111080
Help
Entry
BBBOND_0111080 CDS
T08062
Name
(RefSeq) transcriptional regulatory protein, putative
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
bbig
Babesia bigemina
Pathway
bbig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBBOND_0111080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbig03019
]
BBBOND_0111080
Messenger RNA biogenesis [BR:
bbig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BBBOND_0111080
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BBBOND_0111080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CNOT1_CAF1_bind
CNOT1_TTP_bind
Not1
DUF3819
Motif
Other DBs
NCBI-GeneID:
24563351
NCBI-ProteinID:
XP_012766996
UniProt:
A0A061DAT8
LinkDB
All DBs
Position
I:2445016..2451474
Genome browser
AA seq
2152 aa
AA seq
DB search
MVAATHTPAARTNILQQLEQAENMTDEERVNKYFYNLYVSNITTDEMIEVMHRLDSSPDG
SRNRDTYRTMLTILFNECRFFPKYPVQELAITAELFGKMIKEGLLTCNGNLLLLALRCII
ESLRRGKSSKMFQFGTVALSQFETSIANFPWFASQLLDVPDVRETFPQLYKTCEKLQTIM
TEAMLTTTYVDQYRGIILRPEDCFPGPILDAPDSEAPNIEMLLATADRDRLDVGEMESLM
NGVAEEFTITVPPGPVVNLIYAAFNNMAADSAAQKAREVNEVLSPENVSWLLVYIIKTRA
SKEQNLHEVFVIFIENVKIPKIFDMAIQITYACISACLKNIVEFKGLASYRTLLRNLGSW
IGRITVGRNMPIMSRHLDLKQVIYHAYENGAMIAALPFVCKIIENIKHSKIFKPPNPWTT
AMLNFLVEVHRLKALKTSLVFEVEVLFKHLDLNMNSFANKTRLLESKVRPEDSPDFDISV
IGHRVDKGAHQHAREPAPRKVKAPPLTSGTQTSTLTKAAQHAMQNALLTTMPPRQPVRSG
GVYGSAPLLYTRGLPNYFYDLEIMRYMPLALQGAFVNDESVRDKLNILLGRVMRDKGNPK
GEQGSLDSISEELLLALSSSFLGIPPESFKPGMSLPANMPSEQQSQLSTPPPPPVVENLA
NMPLSSYGERLLQKLHGAVIISPAIAIFEIQPQLRGCVPVAIERAIRRVLPIVSEHSISI
ARATTRVLITNDYAGEDDEVTLRGAIHTMMETFATSLVRATCKEPLRIAFHESLRAALQT
YRTQDCNDQVLIEQLVQIISQDNLLPAVGVAEKIVGERAIREADALVPDIAKTCKTVPKI
TITLPPLLQQWNKLNVFVDKRNLTLYRSLFQRPNRPVAPPQHSQSQPAPQPKSQHNKQQQ
GQQQKHQQQQQSGQGQQQSHGQAGSQKHQQQQQQQSGQQGQQQSHGQSGNPKHQQQQQSG
QGQQQSHGQSGNPKHQQQSGQQGQQQAHRNQQQQQSGPQAQQQVHRGQQQQQQLSGQAQQ
PKSQSLLGPNQQQKTQQLLGQAQPQKSQPLLTQGQQQKAQSLLTQIQQQKSQQLLGQAQQ
QKSQQLLGQAQQQKSQSLLGQVQQQAHRNQQQQQQQLLGQAQQPKSQSLLGPNQPQKNQP
LLGQNQQQKSQPLLTQGQPQKNQQLLGQVQQPAHGQSGQPQKNQPLLAQNQQQKSQPLLA
QNQPQKSQPLLAQNQQQKSQQLLGQAQQPAHGQSGQPQKSQSLLGQGQQQLHRVPQQQQQ
KHQQQQPQPQPPQHQNQQMPPQQHIPPVNHHQRPPMQQPQPQPPQRPAQQQAPQNPPQAL
APASMPPSARGPPAVPMPMPMAPSNGILSRFEEAFGEVREPLRDIALFPPILYSQSPAER
GKKPIMFSTHALLVLYSLPVDHEIFTCIANCLNVMQNSKDMEMASLAIAHRLIMFLCEGI
GSHAGLNVEVLLCVLEGLARLNVAVKQAICSIIYANPVDESNTVFTVATITGLLRYNLLD
WQQLTHFLILSMDKGKNVYAVEMTIVITAIAVVDQRSIHPERATQIIREIANTKCGQDMC
ENYPGIMLKDARSKLLKDYMDLHRDARIVVSSLTPIIKDNLSACVPYASFNIMCPESDTD
PVPEVFLRETMIVNLGFGGVRRVSPPPAVSDSHRAIITIIFAKWIECSLSYEGDNLLLAW
RQFFQRFNLQNLFKMDGGTDNFFAICVGSAVANSPSHGTPYTSAQLADSAFPYHPVDNMV
ALAKMVDVMQRLVGGSDVPPSSALQKLLSATASLIVYGERYMGYYKLWVVMMNYFDKIET
LNGQIVCRITFLNALKIISPLRAPEFAYYWIRLVGHKSLLPGAMAVPRCWQLVAKLLLQA
TCFMQSTNAMEHTPHLEQVYYELVQRLCIDYPHFIVEYYFCIGGSPRIERLVGCCSIEPQ
STPFGTLKTPVDHLPAMLYMPRVAPFIVTILFRHEIKPQLDILLRVMSHKNRLPPVSSIN
IYGADFEELLEVLEDVVINDPAQAPTLFTALTFYIGVEFPHAMAGQVQTDDTRIYLYMDL
MRSLSMAGKYVFVNALCRHMRFPNAHTHFFSCLVLWMFDELREPGDEESRDVMLRVLLEH
VLAPPECPWGVKLAVLELFSNPRFELSGSAFQLLPDPLQSIIDSVARVCSQD
NT seq
6459 nt
NT seq
+upstream
nt +downstream
nt
atggtggccgcgacccacacaccggctgcgcggaccaatatcctgcagcagctggagcag
gccgaaaacatgacggatgaggagagggtcaacaagtacttctacaacctctacgtctcg
aacatcaccaccgacgagatgatagaagtgatgcaccgcttagacagcagccccgacggg
tcccggaacagggatacgtatcgcaccatgctcacgatactcttcaacgagtgcaggttc
ttccccaagtaccccgtccaggagctcgccatcaccgcggagctcttcggcaagatgatt
aaggaggggctgctgacctgtaatggcaacctgctcttgctcgcgctgcgctgcatcatc
gagtcgctcaggcgcggcaagtcctccaagatgttccagttcggcaccgttgcgctgtcg
cagtttgaaacgtcgatcgcgaacttcccctggttcgccagtcagctgctggacgtccct
gacgtgcgcgagactttcccgcagctgtacaagacctgcgagaagcttcaaaccataatg
acggaggccatgctgaccacgacctacgtggaccagtaccgggggatcatattgcgcccc
gaggactgctttccgggtccgattttggacgctccggactccgaggcccccaatatcgaa
atgctgctggccacggcggatagggataggctggacgtcggagagatggagtccctcatg
aacggtgtcgcggaggagttcacgatcacggttccgccagggccggtggtgaacctaatc
tacgccgccttcaacaacatggcggccgacagcgcggcgcagaaggcacgggaggtcaac
gaggtgttatcgcccgagaacgtgtcctggttgctagtatacatcatcaaaacgagagcc
tcgaaggaacagaacctacacgaggtctttgttattttcatcgaaaacgtcaagataccc
aagatattcgacatggccattcagatcacgtacgcgtgcatctcagcctgcctgaagaac
atcgtcgagttcaaggggctagcgtcgtaccgcacgcttctgaggaacctgggcagctgg
atcggcaggattacggtgggccgaaacatgcccatcatgagtcgccacctggacctcaag
caggtcatctaccacgcgtacgaaaacggcgccatgatagcggcactgccgttcgtctgc
aagattatagaaaacataaagcattcaaagattttcaagccgccgaacccgtggacgacg
gccatgctaaacttccttgtggaggtacacaggctgaaggcgctcaagacctccctggta
ttcgaggtggaggtgctcttcaaacacctcgacctcaacatgaacagcttcgcaaacaaa
accaggctgctcgagtccaaggtgcggcccgaagactcgcccgacttcgacatctccgtc
atcggccacagggtggataagggggcgcatcaacatgcgcgggaaccggcgccgcgcaag
gtaaaagcgccgccgctgacatctggtacgcagacatcgacgttaaccaaggctgcgcaa
catgccatgcagaatgctctgctgaccaccatgccgcccagacagccggtgaggtctggt
ggggtctatggaagtgcaccattgctctacacaagaggcttgccaaattacttctatgat
ttggaaataatgcgctacatgccgttagcgcttcaaggcgcttttgtaaacgatgagtcc
gtcagggacaagcttaacattctgctcggcagggttatgcgcgataaaggtaatcccaag
ggtgagcaggggtcactagattcaatatccgaagagctgcttttagctttgagtagttcc
ttcttgggtattcctcccgaaagcttcaagcccggcatgtccttgcccgccaatatgcct
tctgagcagcagtcgcagctctctacgcctccccctccgcccgtcgtggagaacctcgcc
aacatgccgctgagcagctacggcgagcgccttctccagaagctgcacggcgcggtgatt
atatcgcctgcgatcgcaatattcgaaatccagccgcagctacgcgggtgcgtgcctgtg
gcaattgagagggccatacgcagggtgctgcccatagtctcggaacactcgatctcgatt
gcgagggcgaccacgcgtgttctcatcacgaatgattacgccggagaggacgacgaggtc
accttgagaggcgccatccacaccatgatggagacttttgccacctctctagtaagggcc
acctgcaaggagccgctgaggatcgccttccatgaaagcttgagggctgccttgcagacc
taccgcacgcaggattgcaatgaccaggtgctgatagaacagctggtgcagattattagt
caggataacctgctgccggcggtgggcgttgccgaaaagatcgtgggggaacgtgcgatc
cgcgaagccgacgccttggttcctgatatagcgaagacgtgtaaaacggtgccgaagatc
accatcacgctgccgcctctgctgcagcagtggaacaagctgaacgtctttgtggacaag
aggaacctcacgctctacaggagcttgttccagcgtccgaaccgtccggtggcgcctccg
cagcacagccaatcgcaaccggctcctcaacccaaaagccaacacaacaagcagcaacag
ggtcaacagcagaaacaccagcagcaacaacagtctggacaaggtcaacaacagtcgcac
gggcaagccggaagtcagaaacaccagcagcaacaacagcaacagtctggtcagcaaggc
caacaacagtcgcatgggcaatccggaaatccgaaacaccagcagcaacaacagtctgga
caaggccaacagcagtcgcatgggcaatccggaaatccgaaacaccagcaacagtctggt
cagcaaggccaacagcaggcccatcggaaccagcaacaacagcagtctggtccgcaagct
caacaacaggtccatcggggtcaacaacaacaacaacagctgtcgggacaagctcaacag
ccgaagagccagtcattgttgggaccaaatcaacagcaaaaaacccagcaactgttagga
caagcccaaccgcagaaaagccagccattgttgacacagggccagcagcagaaagcccag
tcattgttgacacagatccaacaacaaaaaagccagcaactgttaggacaagcccaacaa
caaaaaagccagcaactgttagggcaagctcaacagcagaaaagccagtcattgttggga
caagttcaacaacaggcccatcggaaccagcagcaacaacaacagcaactgttaggacaa
gctcaacagccgaagagccagtcattgttgggaccaaaccaaccgcagaaaaaccagcca
ttgttgggacaaaatcagcagcagaaaagccagccgttgttgacacagggtcaaccgcag
aaaaaccagcaactgttaggacaagtccaacaaccggcacacggtcaatcgggtcaacct
cagaaaaaccagccattgttggcacaaaaccaacagcagaaaagccagccattgttggca
caaaaccaacctcagaaaagccagccattgttggcacaaaaccaacagcagaaaagccag
caactgttaggacaggctcaacaaccggcacacggtcaatcgggtcaaccgcagaaaagc
cagtcattgttgggacaaggtcaacaacagttgcatcgtgtaccgcagcaacaacagcaa
aagcatcaacaacaacaaccgcagccgcaaccgccacaacatcagaatcaacaaatgcct
ccgcaacaacatattcctcccgtgaatcaccaccaacgaccgccaatgcagcagccgcaa
ccgcagcccccccaaagaccagcgcagcaacaggcgccacagaaccctccgcaagcttta
gcgccagcatcgatgcctccgtcagccaggggcccaccagccgttcccatgccaatgccc
atggcgccgtccaacgggatactgtccaggttcgaagaggcctttggcgaggttagggag
ccgctacgggacatcgcgttgttcccgccgattctgtactcgcagtctcccgcagagcgg
ggtaaaaaacccataatgttcagcacccatgcgctgctggtgctctacagcctccccgtc
gaccacgaaatctttacgtgcatcgccaattgtctcaacgtcatgcagaactctaaggat
atggagatggcgtcgctggccatcgctcacaggctcatcatgttcctctgcgagggaatt
ggctctcacgcgggtctcaacgtggaggttctgctctgcgttttggaaggtctcgccagg
ctcaacgtcgcggtcaagcaggcaatttgctccatcatctatgccaatccagttgacgag
agtaacacggttttcaccgtggccacgattacggggttgctgcgatacaacttgctggac
tggcagcaactgacacacttccttattttatccatggacaagggaaagaacgtttacgcg
gtagagatgacgatcgtgatcacggcgatagccgtcgtagaccagcggagcatccatccg
gagcgtgccacgcaaatcatacgggaaattgccaacaccaaatgcggccaggatatgtgt
gaaaactaccccggcataatgctgaaggacgctcgtagcaagctgttgaaggattatatg
gatctgcaccgcgatgcgagaatcgtggtctcgtcgctgacacccatcatcaaggataat
ctgtctgcgtgcgtaccttacgcctcgttcaacattatgtgcccggaaagtgacactgac
cccgtgcctgaagtattccttcgcgagaccatgatcgttaatctcggattcggaggcgtg
agacgcgtatcaccgccccctgccgtgtctgactcccaccgcgccatcattaccataata
ttcgccaagtggattgagtgcagcttgtcctatgagggcgacaacctgctcctggcttgg
cgccagttcttccaaagatttaacctgcagaacctgttcaagatggacggcggaacggat
aacttcttcgccatctgtgtcggcagtgccgtggcgaactccccctctcacggaacccct
tacacaagtgcgcaacttgcagactctgcattcccgtaccatccggtagacaacatggtc
gcactggccaaaatggtcgatgtcatgcagagacttgtcggaggcagcgatgtgccgccc
tcaagcgcgctgcagaagctgttgtcggcaacagcgagcctgattgtctacggtgagcgt
tacatgggttactacaaactctgggtggtcatgatgaactacttcgacaagatcgagaca
ctcaacggacagattgtttgcaggatcacgttcttgaacgccctcaagattatctcgccg
ctgcgagcgccggagttcgcatactactggatcaggctcgtcgggcacaagagcttgttg
cctggagccatggcagtgccaaggtgttggcaactcgtggccaagctgctccttcaggcg
acgtgcttcatgcagagcaccaacgcgatggaacatacgcctcatctggagcaggtgtac
tacgagctggtccagcggctgtgcatagactacccgcactttattgtcgagtactacttc
tgcatcggaggctcgccgcggatcgagcggctggtcggctgttgcagcattgagccccaa
tccacgcctttcggcacattgaaaacgccagtagaccaccttcctgccatgctatacatg
ccgagggttgctccgtttattgtcacaatactcttccggcacgagatcaagccccaactc
gacatactgctacgtgtcatgtcgcacaagaaccggttaccgcctgtatcttccatcaat
atctacggggcggacttcgaagaactgttggaggttctcgaggacgtagtcataaacgac
cccgcacaggcgcccacgctcttcaccgcccttaccttctacatcggcgttgagttcccg
cacgccatggcgggccaagtacagacagacgacacacggatttatctgtacatggacctc
atgcgcagcttatcaatggcgggcaagtacgtgttcgtcaatgcgctatgccggcacatg
cggttcccgaacgcccatacacacttcttcagctgcctggtgctctggatgttcgacgag
cttcgcgagccaggcgacgaagaatcgcgggacgtcatgctcagggtgctcctggagcac
gtgctggcgccacccgagtgcccgtggggagtgaagttggccgtgctcgagctattcagc
aacccaaggttcgagcttagcggaagcgctttccagttattaccagaccctctgcagtcg
attattgattccgtcgcacgtgtctgttcacaggattaa
DBGET
integrated database retrieval system
