Babesia bigemina: BBBOND_0202810
Help
Entry
BBBOND_0202810 CDS
T08062
Name
(RefSeq) SNRP core protein,putative
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
bbig
Babesia bigemina
Pathway
bbig03018
RNA degradation
bbig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BBBOND_0202810
09123 Folding, sorting and degradation
03018 RNA degradation
BBBOND_0202810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbig03019
]
BBBOND_0202810
03041 Spliceosome [BR:
bbig03041
]
BBBOND_0202810
Messenger RNA biogenesis [BR:
bbig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BBBOND_0202810
mRNA degradation factors
5'-3' decay
Lsm complex
BBBOND_0202810
Spliceosome [BR:
bbig03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
BBBOND_0202810
Complex C
U2 snRNP components
BBBOND_0202810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
VGCC_beta4Aa_N
LSM14
Hfq
SAP_new25
Motif
Other DBs
NCBI-GeneID:
24563665
NCBI-ProteinID:
XP_012767310
UniProt:
A0A061D878
LinkDB
All DBs
Position
II:668908..669520
Genome browser
AA seq
109 aa
AA seq
DB search
MAGSALWPEPLFFNFFQTLVEKGANVTIELKNDLQLTGRLHAVDQYLNFKLSNVTANDTE
RYPHLLSVVNCFVRGSVVRYVFLNSSDVKTEELQELCRREAMKQSSEKK
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atggcaggatccgcactctggcctgagcctctattcttcaacttcttccaaacgctggtc
gagaagggcgcgaatgtaaccattgagctgaaaaacgacctgcagctgactgggcggctc
cacgcagtggaccagtatctgaatttcaagctgagcaacgtgacggccaacgacactgag
cgatacccgcacctgctgtctgttgtgaactgctttgtgcgaggttcggtggtgcggtac
gtgttcctgaattcttcggacgtcaagacggaagagctgcaggagctgtgtcgtcgagag
gctatgaagcagagctcggagaagaagtga
DBGET
integrated database retrieval system