Babesia bigemina: BBBOND_0204980
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Entry
BBBOND_0204980 CDS
T08062
Name
(RefSeq) helicase associated domain containing protein, putative
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
bbig
Babesia bigemina
Pathway
bbig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BBBOND_0204980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbig03041
]
BBBOND_0204980
Enzymes [BR:
bbig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BBBOND_0204980
Spliceosome [BR:
bbig03041
]
Complex C
Other components
Step II factors
BBBOND_0204980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
T2SSE
AAA_29
ABC_tran
Flavi_DEAD
nSTAND3
TsaE
Helicase_RecD
G-alpha
AAA_16
NB-ARC
NPHP3_N
RsgA_GTPase
AAA_30
DUF1805
NACHT
AAA_19
NTPase_1
cobW
ATPase
VapE-like_dom
DAP3
AAA_23
FtsK_SpoIIIE
DUF87
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
24563881
NCBI-ProteinID:
XP_012767526
UniProt:
A0A061DC55
LinkDB
All DBs
Position
II:1128126..1130288
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AA seq
668 aa
AA seq
DB search
MDATTELPIWFHKDEILSKLRSSQVLLLTGETGSGKSTFLPKILHENGYSDSTIVITQPR
RVAAVSLARHVASLFSCDVGKLVGFAVRFLNCCGEETKIKYVTDGVLLREVLVDHLFSKY
SVVVIDEAHERSIRSDVLLGVLRTCIPQRRDLKVIIMSATLRSSAFANFFTDCEIVRVAG
RTFPLDIYYAPQPQEDYLEAAMLTILQINLTYKNGDVLVFLTGQDDIEALDHMLQNKVAV
ITQFLKSSGVQVGGNVADVMRATEVLLGDTPYELKYWKELEIVSLYAALPLQQQSKVFKP
TPDGHRKVVLATNIAETSVTIPGIRFVVDSGLMKQKLFCAKNCFESLVIQKISKDSADQR
AGRAGRMGPGKVFRLYTTESFTSMRVSRIPEMQCTNVSHVYLELKMIGIKNPLDFPLIDP
PSKNALLAAAMELYRLDALDCKGNLTETGKKMGHIPLLPRHARLLLCSAEFSCTSEMLTI
VAMLSTDLTLFSSEKHDKEAFKMRKNLANPSGDHLTLLNMYTIWNDTPNRKETCKQFGFN
AAAFERASEIRSQLVEILTKRVGFINIPSCKDSSEWDNVLKCLCKGGWMNMASINSDSKS
YKIEIQNKTVVIHPHSVLFSKRPLPPLVVFDECTSTRKAYIQNVSEISQDWVTQLLPRLS
LTGSNTCS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaactacggaattgccaatatggtttcacaaggatgaaatattgtcaaagctt
aggtcttctcaggtgttgttgctcactggagagacgggaagcggaaagtccaccttcctc
ccgaagattctccacgaaaatggatacagtgacagcacaatcgtcatcacgcagcctcgg
cgtgtggcggctgtgtcgctcgcgcggcacgttgcctccctgttcagctgtgacgtaggg
aaactggtgggattcgcggtgagattcctcaactgctgcggcgaggaaacgaagatcaag
tacgtcacggacggagtgctactacgcgaagtgctggttgatcatcttttctcaaagtac
tccgtagtagttatagatgaggcccacgaacgctccatacgcagcgacgtgttactgggt
gtcctgcgcacatgcataccacagaggcgcgacctcaaagtaatcataatgtccgccacg
ttgcggtccagtgcattcgcaaattttttcacagattgtgagatcgtacgtgttgctggc
aggacatttcctctcgatatctactacgcaccgcaaccgcaagaggactacctcgaggcg
gcaatgttgaccatcctgcagataaacctgacgtacaaaaatggtgatgtcttggttttt
ctgactgggcaggatgatatagaggcattggatcatatgctgcaaaacaaggtggctgtc
attacacagttcctgaagtcgtcgggagttcaagttgggggaaacgtagcagacgtgatg
cgagccactgaagtgcttctaggtgatacaccgtacgaacttaaatactggaaagaacta
gaaatcgtctcactatacgccgcactcccgctgcaacaacagtctaaagtttttaagccc
acacctgacggacaccgcaaagtcgtgctggcaaccaacatagcagaaacaagcgtaacc
attcccggcatcagattcgtggtggacagtggattgatgaaacagaagttgttctgcgcg
aagaattgctttgagtcgttagtaatacaaaaaatttcgaaagactcggctgatcaacgt
gctggacgagcgggacgtatgggtccaggaaaggtttttcgtctgtacactacggaatcg
ttcacctcaatgcgtgtatcccgcataccggagatgcaatgcaccaatgtatcgcacgtt
tacctggagctaaagatgattggaataaagaacccgctggactttccccttatagatcca
ccaagcaaaaacgctctgctcgccgcagcaatggaactctaccgtctggacgcactcgat
tgcaagggtaacctgacagaaacagggaaaaagatgggacacataccattactgccacgt
catgcgaggcttcttttgtgctctgcggaatttagctgcacctcggaaatgctgactatc
gtggcgatgctgtccaccgatttgactcttttctcgtctgaaaaacacgacaaagaagct
tttaaaatgcggaaaaacctcgccaaccccagtggagaccacctcacgttgctcaatatg
tataccatctggaacgacacgccaaacagaaaggagacctgtaaacaattcggattcaac
gctgccgcattcgaaagagcgtccgaaatacgatctcaactcgtagaaatacttacaaaa
cgcgtcgggttcatcaacatacccagttgtaaggactcgtcagaatgggacaacgtgctg
aagtgcctctgtaagggagggtggatgaacatggcctcaataaacagcgactcaaagtca
tacaaaatcgaaatacaaaacaagacggtggttatacatccgcactccgtgttattctca
aagcgaccgctaccgcccctggtggtattcgacgaatgcacaagcacaaggaaggcatac
attcaaaacgtatcagagatatcacaagactgggtaacgcagctgttacctaggctgtca
ctcacaggatcgaatacgtgtagctaa
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