Babesia bigemina: BBBOND_0205710
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Entry
BBBOND_0205710 CDS
T08062
Name
(RefSeq) Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
bbig
Babesia bigemina
Pathway
bbig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BBBOND_0205710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbig03041
]
BBBOND_0205710
Enzymes [BR:
bbig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BBBOND_0205710
Spliceosome [BR:
bbig03041
]
Complex C
Other components
Step II factors
BBBOND_0205710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
AAA_22
S1
DEAD
AAA_19
GIPC1_GH2
AAA_29
nSTAND3
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
24563954
NCBI-ProteinID:
XP_012767599
UniProt:
A0A061D4A8
LinkDB
All DBs
Position
II:1287919..1291852
Genome browser
AA seq
1174 aa
AA seq
DB search
MVLDGLSELQSLSASSKVAQILKNHLDLDNSDLVEFIIHLAKKAKSAADFNRLLDENEAE
MPTALGEQLFNVVRTLDPPKKNKETWDDIIAAENDERLNFPALSMRNSDIKNDSRHKIEV
KKEGELSDWAKELLKQETGQAYEDDRERDSRRNRDVQRDRERDGRIRGENVRVKDDRGSR
NDYKEGYRRDSYRSRADDRDRRYRSHERRSRSSSGERTPTIDIKGQVFLGRVNRIMEYGA
FVSFRTKTGRHVGLLHVSEILPGKRRLLDVREVLKENMEVYVKVVAVNGDKVNLSMKTVD
QHTGKEDSSRTTSSISEDTQIRRVHTTMMGESTNAPLNSYAHGVEGRKRRMVTDLEKWEQ
QQLINSGVLTKGERMGMNLNADRDAIEEEEEVEIEINEACPTFLKGQTRRSGIELSPIKI
VSNPEGSLARAITTSSTIARERRDAERAQEDRHIIEARRDDATAEGLNLRQGGSSTAQFM
MELQKANSMHKREHAPGDRGQQKQTTLVSIKDQRESLPIFSFREDLLQAVRENDVLVVVG
ETGSGKSTQIPQYLAESGYNCGQNGSVRVIGCTQPRRVAAISVAKRVAEEVGCRLGQEVG
YCIRFEDCTTKDTMIKFMTDGMLLREVLQDPMLERYSCIMLDEAHERTIATDVLFALLKE
CCANRNDFKLIVTSATLEAEKFSAYFNDSSIFSIPGRMFPVEILHTKEQESDYVEASLIT
VLNIHLNEPAGDILLFLTGQEEIDVACRTLHERMKRLESMSPPPLIILPVYAALPGEMQS
AIFEPTPPGCRKCVIATNIAEASLTIDGIFYVIDPGFAKVKRYNPRTGMESLVVVPISQA
SAKQRSGRAGRTGPGKCYRLYTEDSYRSEMLPTAIPEIQRTNLANVVILLKAMGINDFLN
FDFMDKPPVETLIDALDNLYHLGALDDEGLLTRLGRKMAEFPMDPNMAKMLLTSIDMGCS
DEIITIVSMLSIQNIFYRPQDKQAQADRAKSRFTQAEGDHLTLLEVYNQWRRNKFSSLWC
HENFLQSRALLRAQEVRKQLISIMDRYNFKVTSCGNDPEKVAKSVCAGFFHHSARRDPQE
GYRTILDQQNVFIHPSSALYNRSPEYVVYHELVMTTKEYMRDLTTVKAQWLLELAPSMFK
KCEGVSKAKMGQKIEPLHNKFEEKDAWRLSKRRG
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggttcttgacgggctatcggagctgcaaagcctcagtgcatcatcgaaggttgcacaa
attctcaaaaatcacctcgatctcgacaattcggaccttgtggagttcattattcaccta
gctaagaaggcaaagagtgccgccgatttcaaccgactgcttgatgaaaatgaagctgag
atgccgactgccctcggagaacaactttttaacgtcgtgagaactctggaccctcccaag
aagaataaagaaacgtgggacgacataatagccgcggaaaatgacgaacgacttaacttc
cctgcactctccatgaggaacagcgacatcaaaaatgacagcaggcacaaaattgaagtc
aagaaagagggggaactgtcagactgggccaaagaactgttgaagcaggagacaggtcaa
gcatatgaggacgacagggagagagacagtcgaagaaatcgggatgtacagcgtgatagg
gaaagggatggtcgcataagaggcgaaaatgtacgtgtgaaggatgacaggggttcccgt
aatgactataaggaaggctatagaagggatagctaccgttcacgagctgatgacagagat
cggcgatatcgcagccatgagaggagaagcaggagtagcagcggggagcgcacgcctaca
atagacattaaaggccaagtatttcttggcagggtaaataggatcatggaatatggtgca
tttgtttcgtttcgtaccaaaactgggaggcatgttggcctcctacacgtatctgaaata
cttccgggtaaacgccgacttctggacgtaagagaggttttaaaagaaaatatggaagtg
tatgtcaaggtcgttgcggtcaacggtgacaaagtgaatctgtcaatgaaaaccgtggac
cagcataccggtaaagaggattccagccgaacgacatcttctataagtgaggacactcaa
atcaggcgtgttcacacgactatgatgggagaatcaaccaatgcccctttgaacagttat
gcgcacggcgttgagggcagaaagcggcgtatggtcaccgatcttgagaaatgggaacaa
caacagttaattaacagcggcgttctaacgaaaggagaacgcatgggcatgaatttaaat
gcagatcgcgatgccatagaggaggaggaagaagttgaaattgaaattaatgaagcgtgt
cccaccttcctcaaaggtcaaacgagacgttcaggcatcgaactctctccaattaaaatt
gtatcaaacccagaaggctcgcttgccagggctataaccacaagctcgacaatcgcaaga
gaacgaagggatgctgaaagagcgcaggaggaccgtcacattatagaagcccgtcgcgac
gatgcaactgcagaaggtttaaacttgcgccaggggggtagtagcaccgcacagttcatg
atggaattgcaaaaggccaatagtatgcataagagggaacacgctccgggtgatagaggc
caacaaaaacaaacaactctggtgtcaattaaggatcaaagagagtcgctaccaattttt
agttttagggaagatctattgcaggccgtgcgtgaaaatgacgtcctcgtcgtagtgggt
gaaaccggaagcggaaagagtacacagataccacaatatcttgcggaaagtgggtacaat
tgtgggcaaaacggcagcgtcagagtcatcgggtgtactcagccaagacgggtagccgcg
atctctgtggcaaagcgcgtagctgaggaagttggttgcaggctgggtcaagaggtcgga
tactgtattcggtttgaggattgtacaacgaaggacaccatgatcaagttcatgactgac
ggtatgctattgcgagaggtgcttcaggaccccatgcttgagcgatactcttgcatcatg
cttgacgaggcacatgaacgcaccatagctactgatgtcttgttcgcactgctcaaggaa
tgctgcgcaaatcgaaatgacttcaaactcatcgtcacttcggcaacactggaagcagaa
aagttttctgcgtacttcaacgactctagcatattttcaatacccggtaggatgttccca
gtggagattctgcataccaaggagcaagagagtgactatgtagaggcctctttgatcact
gtgctgaatatccatttaaacgaacctgctggagacatattgcttttccttacagggcag
gaagagatcgacgttgcgtgtaggacactgcatgaacgtatgaagaggcttgagtcaatg
tcgccaccacctttgatcattttgcctgtatatgcagctctgccgggggaaatgcaaagc
gcaatcttcgaaccaacgccccctggttgcaggaagtgtgtcattgcgactaatatagca
gaggcatcgcttaccatagatggcatattctacgtcatcgaccctggtttcgccaaagtg
aagaggtataaccccagaacgggcatggaatctctggtggtcgtgcccatatcgcaagcc
agcgcaaaacagagatctggaagggcagggagaactggccccggaaagtgctaccgactg
tatacggaggattcatacaggtcagaaatgcttccgacggccattccagaaatccaacgt
acaaatcttgccaacgtcgtcatcctactcaaggcaatgggaatcaacgactttttgaat
tttgatttcatggataaaccccctgtcgaaactttaatcgacgcattggacaatctctac
cacctaggtgccctagacgacgaagggctgctaacaagacttggacgaaaaatggccgag
tttcccatggaccctaacatggcaaaaatgctcctgacgtcaatcgatatggggtgttcg
gatgaaataatcaccattgtttcaatgttgtccattcagaacatcttttatcggccgcag
gacaaacaggcgcaagcggacagggctaaatcgcgattcacacaagccgaaggggaccat
cttacattattggaggtctacaaccagtggaggagaaacaaattctcgtctttgtggtgc
cacgaaaatttcctacagtcacgtgcgttgttgcgggcacaagaagtacgcaaacaactt
atatcaattatggacagatacaatttcaaggtgacatcgtgcggcaacgatccagagaag
gttgccaagtctgtctgcgcagggttcttccaccactcggcccgcagggacccgcaggag
gggtatcgcaccatcctggatcagcagaacgtttttatacacccatcgtcagctctgtac
aacagatcaccggagtacgttgtgtaccacgagctggttatgaccacaaaggagtacatg
cgggacctcacaacagtcaaggcgcaatggctcctcgaactggcgccatccatgttcaag
aagtgcgaaggcgttagtaaggctaagatgggccaaaaaatcgagccgttgcacaacaag
ttcgaggagaaggacgcgtggagactctccaagcgcagagggtaa
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