Babesia bigemina: BBBOND_0207790
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Entry
BBBOND_0207790 CDS
T08062
Name
(RefSeq) RNB-like domain containing protein, putative
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
bbig
Babesia bigemina
Pathway
bbig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBBOND_0207790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbig03019
]
BBBOND_0207790
Messenger RNA biogenesis [BR:
bbig03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
BBBOND_0207790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
PIN_4
Rrp44_CSD1
OB_HELZ2
MINION
Motif
Other DBs
NCBI-GeneID:
24564165
NCBI-ProteinID:
XP_012767810
UniProt:
A0A061D9M5
LinkDB
All DBs
Position
II:complement(<1721426..>1724538)
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AA seq
988 aa
AA seq
DB search
MEAVEEYEVLQPSLKRTLRTFWRASGHRHVKRFTREVYHRADIGCGVDSCTSCVRSQIQG
ELDGSRPLLVLTVDVVMKQITFCERCLDNCVIPATVLNEVRRRSLSMYARMKKLLLPGNP
AAAAANGGGVADVELTDDAGADVRRFYLFSNENFEPTYVEEDDEETAAERDQRLIEKCAT
WYQSHLPGCRVILLGNHDDPASPTESQDAVSLEPTLSAPSNTSDGTGMDISPRGPSAVDI
GQAAFERLTVEQWARELQAEIADALEYVAAARPDCASGGATADDDGCYPAHLSEAEMQAG
IETGRYYSGILNMFTGSFQNGYVKCGKDEFKVSGTANLNRAIHGDNVCVEVIVGEHANAS
ASSSTAAAAAAEADAPEELVGEESEGATLLDATKDEKPAECIKQECRVVGILRRNWREYC
GTLLPVDEAAEVTGTHHAVQRVFVPVDARIPFIFIDTRKSGELDGKRIVVAIDSWDRFSR
KPCGHWVEVLGDVEDMEVESAVILREHDVITRDFPSPAYKELPPANWTASADEIARRMDF
RNQLVFSVDPPQCKDIDDALGYRVLANGHVEVSVHIADVTHFVRPDSWLDREAAQRCTTV
YLVDRRTDMLPSLLTTNLCSLVEDQDRLCFSVVWEFDQRNEICATRFGKGIIRSRRAFSY
KDAQALIDAGGSDEITQALQGLNRLAKLLRSKRFERGAVELESPDVKFEYELTDIRKMEK
YILYDTNRMVEEFMLLANVSVATKIFERFPTCALLRRHPPPMEVRLKALQRSLSQHRLEF
EFGNSRDLNASLKRIVEKSDSRLGSALRIMTTRCMSQAVYCSSGDSGADDLRHYGLCTDL
YTHFTSPIRRYADVVVHRMLAAALDLEAMDTSFFQELPAQCEALNRRHRNANWCGRESTK
LFAYLFLKKQGSVATVATVVGATEKRLSLLAHEFGIEATASVDVSAFDPETQRVTLTSGR
HVNLFDHVKITLNSSNKHFRYNITAELL
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgttgaggagtacgaggtgctccagccgtcgctgaagcggacgctgcgtacc
ttctggcgtgcctccgggcaccgccacgttaagcggttcacgcgggaggtctaccaccgc
gcggacatcgggtgtggcgtcgacagctgcacatcgtgcgtgcgttcgcaaatccagggc
gaactggacggcagccggccgctgctggtgctcaccgtggacgtcgttatgaaacagata
accttctgcgagcggtgtctggacaactgtgtcatccccgcgactgtcctaaacgaggtg
cgccgccgcagcctcagcatgtacgcgcgcatgaagaagctgctgctgccgggtaacccc
gcagcggccgcagccaatggcggcggagtcgcggatgtcgagttgactgacgacgccggc
gcagacgtgaggcgcttctacctcttctctaacgagaacttcgagcccacctacgttgag
gaggacgacgaggaaacagcggctgagcgcgaccagcggctgatcgagaagtgcgcgacg
tggtaccagtcccaccttcccggatgccgcgtcattctgctgggcaaccacgacgaccct
gcttcgccaaccgagtcgcaggacgcagtgtcactggagccgacgttgtcggccccaagc
aacacgtcggatggcactgggatggacatttcacctcgcggcccgtcagcggtggatatc
ggccaagcggctttcgagcggctgacggtcgagcaatgggctcgtgagttgcaagccgaa
atcgccgacgcgctggagtacgtggcggcagcacgaccggactgcgcgtccggtggcgcc
accgccgacgacgatgggtgttaccccgcgcacctctctgaggcggagatgcaagccggc
atcgagaccggccgttactacagcggcatactcaacatgtttacgggatcgttccagaac
ggctacgtgaagtgcggcaaggacgagttcaaggtctccggcaccgccaacctgaaccgc
gccatccacggcgacaacgtgtgcgtcgaggttatagtgggagagcatgcaaacgcgagc
gcgtcgtcaagcacagctgcggcggccgccgcggaggctgacgcgccggaagaacttgtg
ggcgaagagtcggagggcgccacgctgctggacgccaccaaggacgagaagccggccgag
tgcatcaagcaggagtgccgcgtggtgggcatcctgcgccgcaactggagggagtactgc
gggacgctgctgcccgtcgacgaggcggccgaggtcaccgggacccaccacgcggtgcag
cgcgtcttcgtccccgtggacgcgcgcatcccgttcatcttcatcgacacgcgcaagtcg
ggcgaactcgacggcaagcgcatcgtggtcgccatcgacagctgggaccgtttttcgcgc
aagccgtgcggtcactgggtggaggtgctgggagacgtggaggacatggaggttgagagc
gcggtgattctgagggagcacgacgtcatcacgcgcgacttcccgtcgccggcatacaag
gagctgccgcccgcaaactggacggcgagcgcggatgagattgcgcgccgcatggacttc
cgcaaccagctcgtcttttcggtcgaccccccgcaatgcaaggacatcgacgacgcgctg
gggtaccgcgtgcttgccaacggccacgtggaggtgtccgtgcacattgccgacgtcacg
cacttcgtgcggcctgacagctggctggaccgtgaggctgcgcagcgctgcaccaccgtc
tacctggtggaccgacgcaccgacatgctcccgtccctgctgacgacaaacttgtgctcg
ttggttgaggaccaggaccggctgtgcttctccgtcgtgtgggagttcgaccagcggaac
gagatctgcgccaccaggttcggcaagggcatcatccgcagcaggcgtgcgttcagctac
aaggacgcccaggcgctcatcgacgccggcgggagcgacgagatcacgcaagccctgcag
gggctcaacaggctggcgaaactgctccgatccaaacgcttcgagcgtggcgccgtggag
ctggagtcgccggacgtgaagttcgagtacgagctgaccgacatccgcaagatggagaag
tacattctgtacgacactaaccgcatggtcgaggagtttatgctgctggccaacgtcagc
gtggccactaagatcttcgagcggttccccacgtgcgcgctgctccgtcggcacccgccg
cccatggaggtgcggctgaaggcgctgcagcggtcgctttcgcagcaccgtctggagttc
gagttcggcaactcgcgcgacctgaacgcgtcgctgaagcgcattgtggagaagagcgac
agccgcctgggcagcgccctccgcatcatgacgacgaggtgcatgagccaggccgtgtac
tgcagttcgggcgacagcggcgctgatgacctgcggcactacgggctgtgcaccgacctg
tacacccacttcacgtcgcccatccgtcggtacgccgacgtggtggtgcaccgcatgctg
gctgcggcgctggacctcgaggccatggacaccagcttcttccaggagctccccgcgcag
tgcgaggcgctgaacagaaggcatcgtaacgccaattggtgtggccgcgagtccacgaag
ctcttcgcgtatctgttcctgaagaagcagggcagtgtcgccaccgtggcgacggtggtg
ggcgcgaccgagaagcgcctcagcttgcttgcgcacgagttcgggatcgaggcgacggcg
agcgtggacgtgtccgcgttcgaccccgagacgcagcgcgtcaccctgacatcggggcgg
cacgttaacttgttcgaccacgtgaagataacgctcaactcgagcaacaagcatttcagg
tacaacatcactgcggaactgctgtga
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