Babesia bigemina: BBBOND_0211040
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Entry
BBBOND_0211040 CDS
T08062
Name
(RefSeq) CCR4-NOT TRANSCRIPTION COMPLEX RELATED domain containing protein,putative
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
bbig
Babesia bigemina
Pathway
bbig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBBOND_0211040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbig03000
]
BBBOND_0211040
03019 Messenger RNA biogenesis [BR:
bbig03019
]
BBBOND_0211040
04121 Ubiquitin system [BR:
bbig04121
]
BBBOND_0211040
Enzymes [BR:
bbig01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
BBBOND_0211040
Transcription factors [BR:
bbig03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
BBBOND_0211040
Messenger RNA biogenesis [BR:
bbig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BBBOND_0211040
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BBBOND_0211040
Ubiquitin system [BR:
bbig04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
BBBOND_0211040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Torus
zf-C3HC4_3
zf-UDP
Nup35_RRM_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
24564498
NCBI-ProteinID:
XP_012768143
UniProt:
A0A061D7J5
LinkDB
All DBs
Position
II:2477180..2479201
Genome browser
AA seq
673 aa
AA seq
DB search
MNTHHKLMDGYKAESYGNDAEDEMLCPLCMEVLDETDRNFYPCTCDYQVCLWCLHYIRTT
MGNKCPACRRDYEEANMKYKTSPRVPTTSRSSNPKKKREAGEKDATTREERSGVPSQLSN
ANLKEMRVIQRNLVYVVGIPARIAKMEILKQHEYFGQYGRIQHMVINKSQSYNSHMSGAS
YTAYITYSRKSEAALAIQSIDGSQVSGRTLRASYGTTKYCSFFLKGLKCTNIDCFYLHQY
GDESERISKNELTSLMHKTSKSGLSRTSHGLDTHAVPKGREEHSGRHPNPRRVHRIHETL
QSGKRPEGGVDTYNAYPAGATHSDRDTASWAHVAAGMRDTAASVQPSVPYIYPHPEEMQF
QYSVVGEAYPDGYAHSYDQYRPQRAKSDYQAGKRVKAPYQPHESAQNAAAATPTGQSEVL
RHLFTESLISHLQRYNRGEHILYAVDMPANRGHPAGSHSGQQADGAPAAHDAANAAQGRI
WMMAEDAKASGAYYVSNRRRQLDYYKGANDLFLALEGENAIAGTTAALDPKDIFSDSAAV
EEILEKVKQHTLMLRQMSRMYAVKPQPAKAAPQQRSAEEKQPKEATEAPKTSYSHPVSTS
SELQHAHEASAVAPTKAEKYVTSILFTSPQQQSQLEADIKLHEELVEGVQKLLHAQLKRE
QRYAKHMADLYAN
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgcatcacaagctgatggacggatacaaggcggagtcctacggcaacgatgcc
gaggacgagatgctgtgccccctctgcatggaggttttggacgaaaccgaccggaacttc
tacccgtgcacttgcgactaccaggtgtgcctgtggtgcctgcactacatccgtaccacc
atgggcaacaagtgcccggcgtgccggcgggactacgaggaggcgaacatgaagtacaag
acgagcccgagggtgcccacgacgtcgcgttcgagcaaccccaagaagaagcgtgaggct
ggcgagaaggacgccacgacccgggaggagcggtcgggcgtgccgtcgcagctgagcaac
gcgaacctgaaggagatgcgtgtgatccagcgcaacctggtgtacgtggtgggcatcccc
gccaggatcgccaagatggagattctgaagcagcacgagtacttcgggcagtacgggagg
atccagcacatggtcatcaacaagagccagtcgtacaactcgcacatgagcggggcgtcg
tacaccgcgtacatcacgtactcgaggaaatcggaggctgcgctggccatccagagcatc
gacgggtcccaggtcagcggcaggacgctcagggcctcgtacggcaccaccaagtactgc
agcttcttcctcaaggggctcaagtgcaccaacatcgactgcttctacctgcaccagtac
ggggacgagagcgagcgcatatcgaagaacgagctcaccagcctgatgcacaagaccagc
aagtcggggttgagtcgtacctcgcacggcctcgacacccatgcggtgccgaagggcagg
gaggagcactcgggcaggcaccccaacccgcggcgcgtgcacaggatccacgaaacgctg
cagtccggcaagaggcccgagggcggcgtggacacctacaacgcctaccccgctggcgca
acgcactccgatcgcgacacggcgtcgtgggcgcacgtcgccgcgggcatgagggacacg
gcggccagcgtgcagccctccgtgccgtacatctacccgcaccccgaagagatgcaattc
cagtactcggtggtgggagaggcgtaccccgacggatacgcccactcctacgatcagtac
cggccgcagagagcgaagagcgactaccaggctggcaagcgtgtcaaggcgccgtaccag
ccgcacgagagcgcgcaaaacgctgcggccgcaaccccaacaggccagagtgaagtcttg
cgccacctcttcactgagtctctgatctcccacctgcagcggtacaaccgcggcgagcac
attctgtacgccgtcgacatgccggccaaccggggccaccctgccgggagccacagcggc
cagcaggccgacggggcacccgccgcccacgacgccgctaacgccgcgcaaggccggatc
tggatgatggcggaggacgccaaggcgtcaggggcctactacgtctccaacaggcgccgc
cagctggactactacaagggtgcgaacgacctgttcttggctctcgagggcgaaaacgcc
atcgcaggaaccacggccgcgctggaccccaaggacatcttctccgacagcgcagcggtc
gaggagattttggaaaaggtgaagcagcacacgctgatgctgcggcagatgtcgcggatg
tacgccgtcaagccgcagcctgcgaaggccgcgccgcagcagcgcagcgccgaggagaag
cagcctaaggaggctacggaggcgccgaagacgtcgtacagccaccccgtgagcacgtcg
tcggagctgcagcacgcgcacgaagccagcgcagtcgcgcccaccaaggcggagaaatac
gtaacgagcatactcttcacctcgcctcagcagcagtcgcagctggaggccgacatcaag
ctccacgaggagctggttgagggcgtgcagaagctgctgcacgcgcagttgaagcgggag
cagcggtacgccaaacacatggccgacctgtatgccaactga
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