Babesia bigemina: BBBOND_0211650
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Entry
BBBOND_0211650 CDS
T08062
Name
(RefSeq) exosome component 10, putative
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
bbig
Babesia bigemina
Pathway
bbig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBBOND_0211650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbig03019
]
BBBOND_0211650
Messenger RNA biogenesis [BR:
bbig03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
BBBOND_0211650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
REV
Motif
Other DBs
NCBI-GeneID:
24564562
NCBI-ProteinID:
XP_012768207
UniProt:
A0A061D5L9
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All DBs
Position
II:2627346..2630147
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AA seq
933 aa
AA seq
DB search
MDLFVDYLDSQLQSPEDYDLLVSREESHRSVKSHLNKLISAASDAAKASNLLPTDDEYSI
YVNNPAFSSRLSELSAKCAEAFCCVDPLFRKMEMDDYDDPCSYQAMEALSKEISLGLNVH
HNDPNQRISAFRRDSGGKAKRKVPPKGIASRKSPEPPESSLQCDPEARLEQLPLEIDVDL
YKRVCNHQQSRWAHLIDNFSLSQMSSHRRPKFNPIEPCVTKGVKLSEPEGPPTSDTGVQR
RFVPMLYPTGDYLENYQCNKARAAVLPHPYTAEINALEWSNTEQEHSHRGRKTLGGGSLL
DPKINVSGPSTPCKDCRMVQTLPELESMIAVLKGCNIVAVDVEHHSGQSYRGFVCLVQIT
GAGVDWVVDPFEIFDEMWRLNEVTTDPRILKVMHGAESDTLWLQRDFGVYIVNLFDTLKA
ADVLGLPCGHSLSCLVKYFLDVHLDKSYQLADWRVRPIPSDMLTYASADTHYLLDLYSAL
KNRALELDAQESAAGGIGCADNRIMRIMFRSRKVSLCQYKEHAFNEVIRSLQALRKCRQS
LNRVDHLSLNIMMNLMSLRNYAARVLDESEQFVLPDYGAVAMSLAGDAKNASEVFLRSAT
KRMNMLQHEIPYVVKLRNTMKDALSWLDTTGEDLSEPIPLATVIDRMRQPPRSASPPEKT
SDSATHAKASKPKRGDKGRSRSDSGTLLGTGPKPSGSAPKAPSTLGGTVEPTGGSGSIYA
PFSSVAAQAAGSVPPSSANVSLNSRGDNTSSGGVPSDDVDTTAVSEATASAGSGDISVTA
AKDKGSAKVAASAAKLKKRRAKRRLRPSQSTQLAADAAPDAATQPAAVTAKVNKGDATSK
GANKVKPKKKKKKVAPKQAATGELELDKVAVTPKVNDKAAAEPKPESPAGVPGTVKQRRH
RRRRRRGSSASETSVAAAAPGQDSTNAATHPPS
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggacttgttcgtggactacctggattcacagctacagtctcccgaggattacgacctg
ctagtgtcgcgcgaagaatcacatcgttccgtgaagtcgcacctaaataagctgatttcg
gcggccagcgatgccgcgaaggcgtccaacctcttgccaacggacgatgagtactccatt
tacgtgaataatccggccttttcgtcgcgtctgtctgagctctcggctaagtgtgcggag
gccttctgctgcgtagaccccctctttcgcaagatggagatggacgactacgacgacccg
tgttcgtaccaggccatggaagcgttgtcgaaagagatttccctgggactcaacgtccat
cacaacgatcccaaccagcggatctcggccttccggcgggatagcggcgggaaggcgaaa
cgtaaggtgcctcccaagggcatagcctccaggaagtcacccgaacccccggagagcagc
ctgcagtgtgaccctgaagcccgcctggagcagcttccgctggagatcgatgtcgacctg
tacaagcgcgtgtgcaatcaccagcagtcccgctgggcgcatttgatcgacaacttcagc
ctgagtcagatgtcatcacatcgacgcccgaaattcaacccaatagagccctgcgtgacg
aagggtgtgaagctgtcggaaccggagggccctcctacgtccgacaccggcgtccagcgt
cggttcgtgcccatgttgtacccgactggtgattatttggagaactaccagtgcaacaag
gcccgggcggccgtcttgccgcacccgtacacggctgagattaacgccctcgagtggagc
aacaccgagcaggagcactctcaccgcgggcgcaagacgctcggtggcggcagccttctg
gaccctaaaattaacgtcagcgggccatctacaccgtgtaaggactgccggatggtgcag
actctgccggagttggagagcatgatcgccgtcctcaagggctgcaacatcgtcgctgtg
gacgttgagcaccacagcggccagagctatcgcggcttcgtgtgcctggtgcagataacg
ggtgctggggtggactgggttgttgaccccttcgaaatcttcgacgagatgtggcggctg
aacgaggtgaccacggacccccgcatcctgaaggtgatgcacggtgcggagagcgacacg
ctatggcttcagcgcgacttcggcgtctacatcgtaaacctgtttgacaccctcaaggct
gccgacgtactcggactcccctgtggacactcgctctcctgcttggtgaagtatttcctg
gacgtgcacctggacaagtcctaccagttggcagactggcgggtgcgaccgataccgagc
gacatgctgacctacgcgagtgccgacacacactacctgctggacctgtacagcgccctg
aagaaccgcgcgctcgaactcgacgcgcaggagtccgcagccggcggaatcggctgtgcg
gacaaccgaatcatgcgcataatgttccggagccgtaaagtcagcctctgccagtacaag
gagcatgcgtttaacgaagtcatccgcagccttcaggccctgcgcaagtgccgccaatcc
ctcaatagggtcgaccacctgtcgctcaacatcatgatgaacctgatgtcgttgcgtaac
tacgcagcgcgcgttttggacgaaagcgagcagttcgtgctgcccgactacggtgcagtt
gcgatgtcattggcgggcgatgcgaagaacgccagcgaggtgttcctcaggtcggcgacc
aagcgcatgaacatgctgcagcacgagatcccatacgtggtgaagctgcgcaacaccatg
aaagacgcgctaagttggctagatactacgggcgaagatttgtctgagcctattcccctg
gcaactgtcatcgacaggatgcgtcagccaccgaggagtgcctctccgcctgagaagacc
agcgattccgctacgcacgcaaaggccagtaaacccaagcgtggtgataaggggcgctcg
cgcagtgatagtggtactttactgggtacgggtccgaagcctagtggtagtgctcccaag
gcgcccagcaccctgggcggcactgtggagcctactggaggcagcggatcgatctatgcc
ccgttcagcagcgttgctgcccaagctgctggcagtgttcccccttcgtccgctaatgtt
tccctgaattcgagaggcgataataccagcagtggcggcgtgccctccgacgacgttgac
accacggcggtttccgaggctacggcatcggcaggttcgggtgacatctcagtgaccgcg
gcgaaagataagggaagcgcaaaagtcgcggcatcggccgccaagctcaagaagcgccga
gccaagcgccgcctacggcccagtcagtccacgcagcttgcggcagatgccgcgcctgat
gctgccactcagcccgcggctgttaccgcaaaagtgaacaagggtgacgctacaagtaag
ggggctaataaagtgaagcccaagaagaagaagaagaaggtcgcaccaaagcaggcggca
acaggtgagttagagttagacaaggttgcggtcacgccgaaagttaacgacaaagccgcg
gctgaacccaaacccgaatcgccggcgggggttcctggcactgtgaaacaacgtcgccat
cgccgcagacgtcgacgaggctcatcggcgtcagagacttcagtagctgcagcggcgcca
ggccaagattccaccaacgccgccacacatcctccatcgtag
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