Babesia bigemina: BBBOND_0301450
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Entry
BBBOND_0301450 CDS
T08062
Name
(RefSeq) p68 RNA helicase protein, putative
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bbig
Babesia bigemina
Pathway
bbig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BBBOND_0301450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbig03041
]
BBBOND_0301450
03009 Ribosome biogenesis [BR:
bbig03009
]
BBBOND_0301450
Enzymes [BR:
bbig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BBBOND_0301450
Spliceosome [BR:
bbig03041
]
Complex A
U1 snRNP components
U1 related factors
BBBOND_0301450
Complex B
BBBOND_0301450
Ribosome biogenesis [BR:
bbig03009
]
Eukaryotic type
Pre-60S particles
Helicases
BBBOND_0301450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
24564782
NCBI-ProteinID:
XP_012768427
UniProt:
A0A061D6C7
LinkDB
All DBs
Position
III:364924..367167
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AA seq
570 aa
AA seq
DB search
MVLGLGRVNGVAFIGRASHRSCDGLAARRLPDCIGSSICTFGISGRPGIGAYGEQYAGSG
YDYQGGYSRAPYSVPVNTAPAYNANYGYSQPSGRHHTYGASQYGYGGYGRRRQPYGTYNG
NEYFMQLPTIDWNLKPLVEIKKDFYDLSPEANNRPGEEIEAILESHRIIIDGETPLPKPV
NSFDEAVFNEPIQNIIKQMGFVEPTPIQKVGWTSCLTGRDVVGVSQTGSGKTLAFLLPGL
LHLLAQPPVSAGMGPVILVLAPTRELCQQTYAEAQKFMRVMNLRGAILYGGASKPQQQQQ
IVGGVDIMVATPGRLLDFLSSGVVRLDRVSYFVLDEADRMLDMGFEPQIRMISSQVRPDR
QTLLFSATWPSSIRRLASEFCKNNCIYIQVGDKELTANPNIAQQVKVLRSDETFPYLCTF
LSGEGYNKKVLIFVESRIGADNLVRDLSHRGFSAISIHGNKSQQQRDYAIRQFRNGSINI
MVATDVASRGLDIKDIDYVVNMDIPRSIEDYIHRIGRTARGTNTGGALLLLVSDYPDHRK
AKFAQKLVEILHGVKQPVPPELQHLAQSVR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgggacttggccgggtgaatggcgtagccttcattggtcgagccagccatcgg
agttgtgacgggctggctgcacgaagacttcctgattgcattggctccagcatctgtacg
tttgggatatcagggcggcctggtattggcgcatatggcgaacaatatgccggaagtgga
tacgactatcaggggggctatagtcgtgcgccgtatagcgtccccgtaaatactgcgccc
gcatacaacgcaaattatggctacagccaaccttcaggcaggcatcatacgtatggtgct
tctcagtatggctatggagggtacggcaggcgtcggcaaccatacgggacatacaacggt
aacgaatattttatgcaactaccaaccattgattggaatttgaagccgttagttgaaata
aagaaggacttttacgacctgagccctgaggctaacaacagacctggggaggagattgag
gccattttagaaagccatcgtatcattatcgatggagaaactccgcttcccaaaccggtt
aactcgttcgacgaggccgtgtttaatgaacccatccagaatatcattaagcaaatgggt
tttgttgagccgacaccgatccaaaaagttggttggacttcgtgtctgacaggccgtgat
gtagtaggcgtcagccagaccggatctggaaagacgcttgcatttttgctacccggtttg
ctccatctcttggcacagccaccggtatctgctggaatgggaccagtgatacttgtcttg
gcaccaacccgtgaattgtgccagcagacatatgcggaggcgcagaagttcatgcgtgtg
atgaacctcagaggcgccattctctacggaggagcctcgaagccacagcagcaacagcag
attgttggaggagtcgatataatggtagctactccgggaaggcttctcgatttcctttcc
agtggcgtagtccggctggatcgcgtcagttatttcgttttggacgaggcagatcgcatg
ctcgatatgggattcgagccgcagataaggatgatatcatcgcaggtgaggcctgatcgg
cagaccttgctcttctctgccacgtggccatcgtccatccgccgtctggcctccgagttc
tgtaagaacaactgcatttacattcaagtgggagacaaggagctcacagccaaccctaac
atcgcgcaacaagtcaaggtactgcgttcggatgagaccttcccctatctgtgcaccttc
ctgtccggcgaaggttacaacaagaaggtgctgattttcgtagagtcccgtataggggcg
gataacctggttagggatctgagccaccgcggtttttcggccatttctatacatggcaac
aaatcccagcagcaacgtgattacgcgattcgtcagttccgcaacggatcgattaacatc
atggtggccaccgatgttgcctccagggggctcgacattaaggacatcgactacgtcgtg
aacatggacataccgcgtagcattgaggactatattcacagaatcggccgtacggcgcgg
ggcaccaatacgggcggtgctcttctgctactagttagcgattaccccgaccatagaaag
gccaaattcgctcagaaattagttgaaatactccacggagtcaaacagcccgtgcctccg
gagctgcagcacctggcacagagtgtccgctaa
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