Babesia bigemina: BBBOND_0302460
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Entry
BBBOND_0302460 CDS
T08062
Name
(RefSeq) LSM domain containing protein, putative
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
bbig
Babesia bigemina
Pathway
bbig03018
RNA degradation
bbig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BBBOND_0302460
09123 Folding, sorting and degradation
03018 RNA degradation
BBBOND_0302460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbig03019
]
BBBOND_0302460
03041 Spliceosome [BR:
bbig03041
]
BBBOND_0302460
Messenger RNA biogenesis [BR:
bbig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BBBOND_0302460
mRNA degradation factors
5'-3' decay
Lsm complex
BBBOND_0302460
Spliceosome [BR:
bbig03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
BBBOND_0302460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
24564883
NCBI-ProteinID:
XP_012768528
UniProt:
A0A061D8R6
LinkDB
All DBs
Position
III:complement(587549..588038)
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AA seq
104 aa
AA seq
DB search
MTAPSKSFRDVKSVIKLNAYLNKKVYVKFSGGREVQGVLKGHDAMSNLVLDDTEEFLRDP
EDPDRVTDKTRQLGLLVARGTSVTVIHPVEGTEKIANPFAGRMS
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgacggctccgagtaagagcttccgcgacgtgaagagcgttataaagctgaacgcctac
ctgaacaagaaggtgtacgtaaaattcagcggcggacgcgaagttcagggggtgttgaag
ggtcatgacgcgatgtcgaatctcgttttggacgacacggaagaatttttgcgcgatccc
gaagaccctgacagagtgaccgataaaacccgtcaattgggtcttttggttgcccgcggc
acgtcggtaacagttattcatccggtggaaggaacggagaagattgcgaacccatttgct
ggtcgtatgtcttag
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