Babesia bigemina: BBBOND_0302840
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Entry
BBBOND_0302840 CDS
T08062
Name
(RefSeq) splicing factor, CC1-like family protein, putative
KO
K13091
RNA-binding protein 23/39
Organism
bbig
Babesia bigemina
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbig03041
]
BBBOND_0302840
Spliceosome [BR:
bbig03041
]
Common components
Common spliceosomal components
General mRNP proteins
BBBOND_0302840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SET1_RBD
RBM39linker
DUF1866
RRM_occluded
RBD_DEAH11
RRM_3
ALS_ss_C
Motif
Other DBs
NCBI-GeneID:
24564921
NCBI-ProteinID:
XP_012768566
UniProt:
A0A061DDM3
LinkDB
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Position
III:complement(680757..682498)
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AA seq
490 aa
AA seq
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METADVADVGKVIPDRDRESREPRDKSPSRYHRRDRSMSRSPRRYHRSRRHSDSYSSSRG
HRERSHRRHSRHSRSISRDRESSRRRHSRSTRRERSPSRQRSYRESEKRSRARDERAPVD
PEERARLEHEQRRQREIEEAQREDLTVLVINLHLGADERKIYEAFSEHAGKVRDVQCVRD
ARSGRSKGVAYVEFYTQESVIKALAMNGFELNGQRIRVQSSQAEKNRAARAAKLIQQQTV
EVADSPFTVQVTGLTGSLSAITEVEIKQMFSPFGTIINVEIMRDPHSGLPLGHAFLKFKR
ASEAKEAVSAMNGFDIGGQTIKVAYATGANATGRLASHGEVDIERLDEDGGGLISGANNK
IALMHKLQRTSSSDTAGAAQSAQSVAHTGISNAPTCNVILNNMFSSSDPTVSEPNFFSEV
EEDVNDECNKYGKVVKVYINRQAVDGKVWVKFGNLLDATVAYRSLNGRVFAGNTIKVEYV
TDDHWQKMVR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagctgacgttgcagatgtcggcaaagtgattcccgacagggatcgcgaaagc
cgcgagcctagagacaagagccctagtcgctaccaccggcgcgaccgctcgatgtcacgt
agcccgagaaggtaccaccgatcgcggaggcactcggatagctacagctcatcgcgcggc
catcgcgaacgatcgcaccgaaggcactccagacacagccgttccatcagccgagaccgc
gaatcatccaggaggcgccacagcaggtccactcgcagagagcgtagcccatcacgacaa
cgcagctatcgtgagagcgagaagcgaagcagggcgcgcgatgaaagggcgcctgtggac
ccggaagagcgcgccagattggagcacgagcagaggagacagcgtgagattgaggaggcg
cagcgcgaggacctcaccgtgctcgtgatcaacctacacctcggcgcagatgaacgcaaa
atatacgaagcattcagtgaacatgcaggaaaagtgcgagatgtgcaatgcgtgcgcgac
gccaggtccggaaggtcaaagggagtggcgtacgtggagttctacacgcaggagtctgtc
atcaaggcgctcgcgatgaacgggtttgaactgaacggtcaacgcattcgtgtccagtca
tcgcaggctgagaagaacagggcggcgagggcggcgaagctcatccagcaacagacggtc
gaggtcgccgactcgccgttcaccgtccaggtcacaggactgacagggtccctgtccgcc
atcaccgaggtcgagatcaagcagatgttctcgcccttcgggaccattatcaacgtcgaa
atcatgcgcgacccgcactctggtctgccgctaggtcacgcgttcctcaagttcaaacgc
gcgtcggaggctaaggaggccgtgtccgcgatgaacggcttcgacatcggaggtcagaca
atcaaagtggcatatgcaacaggcgctaatgcaaccggaaggctggcgtcacatggagaa
gttgacattgagcgtctggatgaggacggaggcggcctcatttcaggcgccaacaacaaa
atcgcattgatgcacaagctacaaaggacatcgtcttcggatactgccggtgcagcgcaa
tcggcacaatcggtggcccacaccggcatatcgaacgcgccaacgtgtaacgtgatcctg
aataacatgttcagctcatcagatcccacggtatcggagcccaacttcttcagtgaagtg
gaggaagacgtgaacgatgagtgcaacaaatacggtaaggtagtcaaagtatacatcaac
aggcaagccgtggacggaaaggtctgggtcaagttcgggaaccttttggacgccacggtg
gcatatcgaagcctcaacgggcgcgtattcgcgggtaacaccatcaaggtcgaatatgtc
acggatgaccactggcagaagatggtcaggtag
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