Babesia bigemina: BBBOND_0303240
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Entry
BBBOND_0303240 CDS
T08062
Name
(RefSeq) regulator of nonsense transcripts, putative
Organism
bbig
Babesia bigemina
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
dsrm
ResIII
PIF1
SLFN-g3_helicase
DEAD
NPHP3_N
PhoH
UvrD-helicase
NACHT
Helicase_RecD
nSTAND3
AAA
Amidase_3
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
24564961
NCBI-ProteinID:
XP_012768606
UniProt:
A0A061DDN7
LinkDB
All DBs
Position
III:794480..798002
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AA seq
1080 aa
AA seq
DB search
MARPSKAKSVFSDNADLPSQKKRITTAATSADMGPSGSASLYKLEQMAAGFGKIPEFNKL
MYNDDNVLMTLNVQLKNTRYKANMDVFMDKSAAVCKYDISVNGGEKITGTTTATNKKAAR
KNAARCMLMHMDKPTVEEIEEITKWMVAGHRNNIGAREEPVSKEFGPLGHTVTLRWRCDD
HSFYGKGVSNSLKLAELYAMQDLYCQTHKFPTLQQEAKVLRPVKLNATPTITKASAKASR
PEPIIDELSKADVCHMNTLRNSMVNKMKVKQHEVITQSRGGFLCTLTWEWLDTNGQVEKR
TVAKQGTSKALAKAAASKAILVEVGVIDPVTREESSHASSIRSSITKNIARAVQAATEFV
RKTNCSVWRLFMPQLVEALVQRGDRELVTPLLESITAADVEIPTDIWETLLSLSSIAVDE
MFCKAILHGIKHLTLDSRYFISEKAQKVYQKQSWLLALEFNAEMCSNLASLQSRGGKDVV
SLLCDNTKSQLPLMFLKGTVNSEYSKSPLREDDMVLLVPYNGVYQWGDGLVAIVSKHKSE
NYEASLTCKVVNRLKWDPTDAIYEHNRFGVFFVNNTTTNKRMMQALLAITHKMLPVNSNA
QGYHYNKDLQRILIESDKDSVADLELNNAALPTSIPLTPSQSDACKSALTNPLTLIQGPP
GTGKTQVACAIIDCWRQQTKEKILAVADSNVAADNLIEGLNSRGIHALRIGFGSESLLQE
ESLKRLAKYGRYKSLKESGYYKEANSLRMAMITEAIRQHQVIIATCVGSGNDILSSYSFP
YVVIDECAQSIEASNLIPIGKGCKQLVLIGDHKQLRPTIISPEAAAQGLSISLLERLVSA
QVATVHVLDVQRRMHPSISEFPNKHFYRGAVRDAVSESSRPPVRGFKWPTRGYNIAFIDA
SAGCPNSQFESNVGTSKANALEADIVAIVLKSIIEARDVRESQIGILTAYDAQKWMLKRK
LNQIDSVKGQAIEIDSVDGFQGKEKELIIFSAVRSNLQKDVGFLRDPRRMNVMLTRARRG
LIVIADKYTIMNDIANWRPYVEYITDRVLDIHISELNMFLDSPSNRLDGIVRQVRTGWYP
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcccgagcaaggcgaagagcgttttctcagacaacgccgaccttccatcgcag
aagaagcgaatcaccaccgccgctaccagcgcagacatgggtccgagtggcagcgccagc
ctgtataagctggagcaaatggcggcggggttcggcaaaatcccggaattcaacaagctc
atgtataacgacgacaacgtactgatgacgctcaacgtgcagctcaaaaacacacggtac
aaggccaacatggacgttttcatggacaaatcggccgcagtctgcaagtacgatatatcc
gtaaacggtggagagaaaatcacgggaactaccaccgctaccaacaagaaagcagcgagg
aaaaatgcagctagatgtatgctgatgcatatggacaaaccgacagtagaagagatcgag
gaaatcaccaaatggatggttgctgggcaccgcaacaacattggcgcccgagaggagccc
gtgtccaaagagttcgggccgctcgggcacaccgtcaccctccggtggaggtgtgacgac
cactcgttctatggcaaaggggtgtccaactccctgaagctggcggaactctacgccatg
caggacctctactgccaaacgcacaagtttcccacactgcagcaagaggcgaaagtgctg
agaccagtcaagctaaacgctactcccaccatcacaaaagcttctgcgaaggcttccagg
ccagagcccatcatcgacgaattgtcgaaggcagacgtctgccacatgaacactctaagg
aactccatggtcaacaagatgaaggtgaagcagcacgaggtcatcacccagtcacgaggc
gggttcctgtgcacgctcacgtgggagtggttggacaccaacgggcaggtcgagaagagg
acagtcgccaaacaaggcaccagcaaggcgctggccaaggcagcagcgagcaaggcgata
ctcgtggaagtcggcgttatcgaccccgttacgcgtgaagaaagttctcacgcttcgtca
atacgaagcagcataaccaagaatatcgccagagccgtgcaggcggccacggaatttgtg
cggaaaacaaactgcagcgtgtggagactgtttatgccgcaattggtcgaagcgctcgtg
cagcggggcgatcgcgaattggtgacgccactgctggagagcatcaccgccgcagacgtg
gagataccgactgacatctgggagacgctcctgtcgctctccagcattgccgttgacgag
atgttttgcaaggcgattctgcacggtatcaaacatctgacgctggactcgaggtatttc
atctcggaaaaggctcaaaaggtctaccaaaagcaaagctggctgcttgcgctggagttc
aacgccgaaatgtgctcgaacttggcatcgcttcagagcaggggcggaaaagacgtcgtt
agcctgctctgtgacaacaccaagtcgcagctcccgctgatgttcctcaaagggaccgtc
aactcggagtacagcaagtcgcccttgagagaggacgatatggtgcttcttgtgccgtac
aacggcgtgtatcaatggggggacggactggtcgctattgtctccaagcacaaaagcgaa
aactacgaagccagcctgacgtgcaaggtcgtgaaccgactaaaatgggatccaaccgac
gccatctacgagcacaataggtttggggtcttcttcgtcaacaacactaccaccaacaag
aggatgatgcaggcactgctggcaataacacacaagatgttgccagttaactccaacgca
caggggtaccactacaacaaggatctgcaacgcatactgatcgagagcgacaaggattct
gtagcggatctagaactgaacaatgcggcgctgcccaccagcatacctctcacgccatcc
cagtccgacgcctgcaaaagtgcgctcacaaaccccttgacactcatacagggtcctccg
ggcacaggcaaaacgcaggtggcgtgtgcgatcatcgactgctggaggcagcagacgaaa
gaaaaaattttggctgttgcggactcaaacgttgctgcagacaacctcattgaggggttg
aacagcaggggtattcatgctttgaggatcggatttgggtctgagtcgctgctgcaggag
gagtcgctcaaaaggcttgccaaatatggccgctacaagtcactgaaagaatccgggtac
tacaaagaagccaactccttgcgcatggcaatgatcaccgaggctatcagacagcaccag
gtcatcatagccacctgcgttggaagtgggaacgacattctctccagttactcattcccg
tacgtcgttatagacgagtgtgcccagtccattgaggcaagcaacctcatccccattggg
aagggctgcaaacagctcgtactcataggagaccacaagcaactgcggcccaccatcata
tctccggaggctgcggcccagggactctccatctcacttctcgagcggctggtatccgca
caggtagccacagtgcatgtgctggacgtgcagaggcgtatgcacccgtcaatttccgag
ttcccgaacaagcatttctaccgtggagcggtcagagatgccgttagcgagagcagcaga
ccaccggtgagggggttcaagtggccgacaagaggatacaacatcgctttcatcgacgcg
agcgcaggatgcccaaacagccagtttgaatcaaacgtcggcacttccaaagctaacgca
cttgaggccgacatcgtcgccattgtactcaagtcgattattgaggcgagggatgtgagg
gagtcacagattggaattcttactgcgtatgacgcgcaaaagtggatgctcaaacggaaa
ctaaaccaaatcgactcggtaaaagggcaggcgatcgaaatcgattccgtagacgggttc
caaggcaaagaaaaggaactcataattttctcagcagtcagatctaacctgcagaaggac
gttgggtttctcagggatcccaggaggatgaacgtcatgttaacccgtgctcgcaggggg
ctcatcgtcattgccgacaagtacacgataatgaacgacatcgccaactggaggccctat
gtggagtatattacggaccgggtgctggacattcacatctcggagctgaacatgttcctc
gattcaccttcgaaccgactggacggcatagtccgccaggttagaaccgggtggtacccg
taa
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