Babesia bigemina: BBBOND_0304960
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Entry
BBBOND_0304960 CDS
T08062
Name
(RefSeq) REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT, putative
KO
K10755
replication factor C subunit 2/4
Organism
bbig
Babesia bigemina
Pathway
bbig03030
DNA replication
bbig03410
Base excision repair
bbig03420
Nucleotide excision repair
bbig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBBOND_0304960
03410 Base excision repair
BBBOND_0304960
03420 Nucleotide excision repair
BBBOND_0304960
03430 Mismatch repair
BBBOND_0304960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbig03032
]
BBBOND_0304960
03036 Chromosome and associated proteins [BR:
bbig03036
]
BBBOND_0304960
03400 DNA repair and recombination proteins [BR:
bbig03400
]
BBBOND_0304960
DNA replication proteins [BR:
bbig03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
BBBOND_0304960
DNA Replication Termination Factors
ELG1-RFC complex
BBBOND_0304960
Chromosome and associated proteins [BR:
bbig03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
BBBOND_0304960
DNA repair and recombination proteins [BR:
bbig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
BBBOND_0304960
Check point factors
HRAD17(Rad24)-RFC complex
BBBOND_0304960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
Rad17
AAA_30
AAA_11
RCF1-5-like_lid
DNAX_ATPase_lid
AAA_assoc_2
AAA_22
DEAD
AAA_5
AAA_lid_RFC1
AAA_19
AAA_28
RuvB_N
SLFN-g3_helicase
AAA_2
PhoH
nSTAND3
DNA_pol3_gamma3
ResIII
Mg_chelatase
AAA_16
AAA_25
IstB_IS21
Hydin_ADK
AAA_3
RNA_helicase
TPR_HPS5
TIP49
Motif
Other DBs
NCBI-GeneID:
24565134
NCBI-ProteinID:
XP_012768779
UniProt:
A0A061D7S3
LinkDB
All DBs
Position
III:complement(1245388..1246702)
Genome browser
AA seq
336 aa
AA seq
DB search
MKKNAPWVEKYRPAKLADVVFQTHAVATMQQIVETFNMPHMIFHGPPGTGKTSAALAMAR
QIYGVEGMKERVLELNASDERGISVVRERIKTYTRLNISNNRINPETGRVMPNFKIIILD
EADMITPDAQAALRRVIENFSNISRFILICNYLHKIIGPIYSRCSAFHFKPIVQEAQVER
LRFICQSEQLECDDAALDFLTRVSQGDMRRSVTLLQSTASLYSKVTEDAVRNVSGYPPRH
IVEDIFTACMAPTNEVEAICKQIVHDGWEIAAIFQQLAEYVVNCETLSDVQKAMITIELS
GRDFALLQGGLQYFQLASICFHIRSVIANGGQRASA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaacgcgccctgggttgagaagtaccgtccagcgaagctggcggacgttgtc
ttccagacccatgccgtggcgactatgcagcagatcgtcgagaccttcaacatgccacac
atgatcttccatggccctcctggaacggggaagacatcggctgcactggccatggcgcgt
cagatctacggcgtcgaagggatgaaagagcgcgttctggagctgaacgcgtcggacgag
cgcggcatcagcgttgttcgggagcgtattaagacctacacccgtctgaacatttcaaac
aatcgcattaacccagagaccgggagggtgatgcctaacttcaagattatcatcttggac
gaagccgacatgatcaccccggatgcgcaggctgcgctgaggcgtgttatcgagaacttc
tcgaacatatcgcggttcatattgatatgcaactacctccacaagatcatcgggcccata
tacagccgttgctcggctttccacttcaagcccatcgtacaggaagctcaagtggagcgg
ctcaggttcatctgccagtctgagcagctggagtgcgacgacgcggcgctggacttcctc
acgcgcgtatcgcagggtgatatgcgtcgcagtgtaacactgcttcagtcaacggctagc
ctctacagcaaggtcacggaggacgccgttcgcaatgtgtccggctacccgccccgccac
atcgtagaagacatcttcaccgcgtgtatggcgccgactaacgaggtggaggccatctgc
aagcagatagtccacgacggctgggaaatagctgccatcttccaacagctcgccgaatac
gtcgtgaactgcgagacattgagcgatgtccaaaaggccatgatcacaatcgagttgtcg
ggcagggattttgcgcttctgcaaggcggtctgcaatactttcagctagcatctatctgc
ttccacatccgatccgtcattgccaacggcggtcagcgcgcgtcagcgtga
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integrated database retrieval system
