Babesia bigemina: BBBOND_0307300
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Entry
BBBOND_0307300 CDS
T08062
Name
(RefSeq) CAF1 family ribonuclease containing protein, putative
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
bbig
Babesia bigemina
Pathway
bbig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBBOND_0307300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbig03019
]
BBBOND_0307300
Messenger RNA biogenesis [BR:
bbig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BBBOND_0307300
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BBBOND_0307300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
24565367
NCBI-ProteinID:
XP_012769012
UniProt:
A0A061D837
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All DBs
Position
III:complement(<1791111..>1792235)
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AA seq
374 aa
AA seq
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MDEELKIVDVWSDNLEDAFERIRDVLEHYPYVSIDTEFPGIVAKPTSYQEDYNYQTVKCN
VDLLKIIQLGLTFADADGQTPSGVSTWQFNFKFDLQRDMYAYDSIELLKESGIDFEKHLR
KGIDVAHFGELIIASGLVMNEDVVWVSFHGSYDFAYVLKLLTCTSLPANQSEFFDLLHDF
FPSLYDIKFLLDERSIKLSGRSSLQRISEHLDVKRIGPQHQAGSDSLVTCRTFFKLMQRY
FENELDDEKYQGVIYGLGKASAQLHGDCKSDGLYNTPTYAMALPYANGPNSMKWGSDMQA
HHVQTTLNPGIVNANLHGSSGAVILNSSVSSPHGEVTSPLGSNVLPGSAAMVNNGAMSNM
TGLSFYDTPQFTNQ
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaactaaagatagtggacgtgtggtcggataacttggaagatgcgttcgag
aggataagggacgtactggagcattatccgtacgtctccatagacacggaattccccggc
atcgtcgcgaaacccacaagctaccaagaggactacaactaccagaccgtcaagtgcaat
gtcgacctgctcaagatcattcagctcgggctcacgttcgccgacgccgacgggcagacg
cccagcggcgtgtcgacgtggcagttcaacttcaagttcgacctgcagcgcgacatgtac
gcctacgactccatcgagctactgaaggagagcgggatcgatttcgagaagcacctacgc
aaggggatcgatgtcgcgcactttggggaactcataatagcctccggactagtcatgaac
gaggacgtcgtgtgggtaagcttccatggcagctacgacttcgcgtacgtgctcaagctt
ctcacctgcacgagtctgcctgccaaccagtcggagtttttcgacctcctgcacgacttc
ttcccctctctgtacgacatcaagttcctcctggacgagcgctcgatcaaactctctggt
aggagcagtctgcaacgcatctcggagcacctggacgtcaagcgaatcgggccccagcac
caggcggggagcgacagcctggtgacgtgccgcacgttcttcaagctcatgcagcggtat
ttcgagaacgagctggatgacgagaagtaccagggcgtgatctacggcctgggcaaggct
tctgcgcagctgcatggcgactgcaagagcgacggcctgtacaacacccccacgtacgca
atggcgctgccgtatgcaaacgggccgaacagtatgaagtggggatcggacatgcaggca
caccacgtacaaaccacgctcaacccaggcatcgtcaacgccaacctgcacgggtcgtcc
ggagctgtcatcctcaattcgtcagtgtcgagcccacatggagaagtcacaagccccttg
ggatcgaacgtcctgcccggcagcgcagcgatggtgaacaacggggcgatgagcaacatg
accgggctgagcttctacgacacgccgcaattcactaaccagtag
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