KEGG   Babesia bigemina: BBBOND_0308100
Entry
BBBOND_0308100    CDS       T08062                                 
Name
(RefSeq) RNA polymerase Rpb4 family protein, putative
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
bbig  Babesia bigemina
Pathway
bbig03020  RNA polymerase
bbig03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bbig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BBBOND_0308100
  09124 Replication and repair
   03420 Nucleotide excision repair
    BBBOND_0308100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbig03021]
    BBBOND_0308100
   03400 DNA repair and recombination proteins [BR:bbig03400]
    BBBOND_0308100
Transcription machinery [BR:bbig03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     BBBOND_0308100
DNA repair and recombination proteins [BR:bbig03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      BBBOND_0308100
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 24565447
NCBI-ProteinID: XP_012769092
UniProt: A0A061D896
LinkDB
Position
III:1982235..1982839
AA seq 127 aa
MDLTREPNKVEVDEEFKNAKCLNLCELHLILGDQLRLQHKRNEAAKQLIKTSHDYASRFA
ILKFRSAIVDIRTWRDGSLHEFEMASLVNLLPKSVDEAKSLIPSLSRIPDERIDEILELL
ESYRVQS
NT seq 384 nt   +upstreamnt  +downstreamnt
atggacttgactcgggagccgaacaaggttgaggtggacgaagagttcaagaacgccaaa
tgtctgaacctctgtgagctccacctcatcttgggtgaccagctgcgtctgcagcacaaa
cgcaacgaggccgccaagcagctcatcaagacatctcacgattacgcaagtcgtttcgcc
atcctgaagttcaggagtgccattgtcgacattcgaacgtggagggacgggtcgctgcac
gaattcgagatggccagtttggtgaacctgttgccgaagtcggtggacgaggcaaaatcg
ctgatcccctctctgagccgcataccggacgagcggatcgacgaaattctggagttgctc
gagagttaccgcgtgcagtcttga

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