Babesia bigemina: BBBOND_0311260
Help
Entry
BBBOND_0311260 CDS
T08062
Name
(RefSeq) DEAD/DEAH box helicase domain containing protein, putative
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
bbig
Babesia bigemina
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbig03041
]
BBBOND_0311260
03016 Transfer RNA biogenesis [BR:
bbig03016
]
BBBOND_0311260
Enzymes [BR:
bbig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BBBOND_0311260
Spliceosome [BR:
bbig03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
BBBOND_0311260
Transfer RNA biogenesis [BR:
bbig03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BBBOND_0311260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
24565764
NCBI-ProteinID:
XP_012769409
UniProt:
A0A061D9K9
LinkDB
All DBs
Position
III:complement(2773823..2775952)
Genome browser
AA seq
709 aa
AA seq
DB search
MPFSEFGVDPDLNRACLDLGWVLPTPIQAEAIPAILGGRDVCAAAETGSGKTAAFALPCL
QLVHETLRERASGKRRPQAVVDDANDEQASTAAVESESATADDNLLTVDGDSEMQFDATT
NTFLTNADKWFGARLCKPVGGTGRYCFECRVESDGLCRFGWATANCQYAIGLDKNSYGFG
STGKKSNSGKFLDYGAPYGRGDVLQCLLDMKSGEVAFKLNQRHLGVAYKIRSPGEPFFPS
VCAKKAKFTVNVHKMTFPEEGYTPVGLAESSGGSGSSNDSEGRRAQRALCLVVEPTIELA
RQTLENFKLYAKYLTAPAITVSDNAGAHIVVTTLRSASKVPTGTVQFLVLDEADELIKQD
AKATSQIVRSMRSRGPGPDKGRLQVLLFSATLHSPVVAENVEQLTREAQWIDLKGHPQIA
DTVDVCAVQLNPECTYDFERQYPEPPLDGLEHLDRASRRIKTLKPKCLVALLDKLNVSSG
LIFCRTNLDCENLCTYLAHLNSTRSNTLINRYSATQLGGKLDQHRRKRNLEDFKNGLYRF
LVCTDVAARGVDIAGMPFCAMLNVSECKFQFLHRVGRVGRSQARGLAIVIASTAPERVWY
HTCTGRTQGGGAKSRFKAASVCRNYDTVDRGGCTTIQDEPAYMAEVHKLVPPGREIGTID
PNVLQLPPLGGTQYGEATMSMQHTEFQGPMQELYRASQRRYLVNIHRSF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcagcgaattcggagtcgatcctgacctgaatcgagcatgtcttgacctaggc
tgggtgctgccgacgccaatacaggcagaggcgatccccgcgattctaggcggacgcgat
gtttgcgcggcggcggaaaccggaagcggcaagaccgcagcgttcgcgttgccgtgcctg
cagcttgtccacgagacgctgagggagcgcgcttcgggaaaacgccgaccgcaagcggtt
gttgatgatgccaacgatgagcaggcatcgacggcagccgtcgaatctgaatcagctact
gcagacgataacttgctaactgtagatggcgattccgaaatgcagtttgatgcaacgacc
aacacatttttaactaatgccgacaaatggttcggcgcccgtttatgcaaacccgtaggc
ggcactggtcggtactgtttcgagtgccgggtggagtcggacggactttgcaggttcggg
tgggccacggcaaactgccagtacgcaattgggctcgacaaaaactcgtatggcttcggg
tcaactgggaagaagagcaacagcggaaagtttctggactatggagcgccgtacgggcgc
ggtgacgtattgcagtgcctgttggatatgaagtcgggcgaggttgctttcaagctcaac
cagcgtcacctgggtgtcgcatacaaaatacgaagcccgggtgagccgttcttcccctca
gtgtgcgctaaaaaggccaaatttactgtaaatgtgcacaaaatgacgtttcccgaggaa
ggatacacgccagttgggttggcagagagctcaggtggctccggcagctccaatgattca
gaaggtcgcagggcccaacgtgccctctgccttgtcgtggaaccgacgatagagctggcg
aggcaaactttggagaatttcaagctgtacgcaaagtatctcactgcgcccgctatcacc
gtctctgacaacgcaggggcgcatatcgtggtcaccaccttgcggagcgccagcaaggtg
ccgactggcaccgtgcagttcctcgtcctggacgaagccgacgaactcatcaagcaggac
gcgaaagcgacgtcgcagatagttcgcagtatgcgcagcagaggaccggggccagataaa
ggccgcctgcaggtgctcctgttctccgcgacgttgcacagccccgttgtcgcagagaac
gtggagcagcttacgcgcgaggcccagtggatcgacctcaaggggcacccgcaaatagcc
gacactgtggatgtttgcgcggtgcagctgaacccggagtgcacgtacgacttcgagcgc
cagtaccctgagccgcctctggacggactcgagcacctcgaccgggcgtcgcgccgtata
aagacgctgaagccaaagtgccttgttgcgctgctcgacaagctcaacgtctccagcggg
ctcattttctgccgcaccaacctcgactgcgagaacctctgcacgtacctggcgcacctc
aacagcacgcgcagcaacacgctgatcaaccgctactcggcgacgcagctgggtgggaag
ctggaccagcaccggcgcaagcgtaacttggaggatttcaaaaacggcctatacaggttc
ctggtttgcacggacgttgccgcccggggcgtcgacatcgccggcatgccgttctgcgcg
atgctgaacgtatcggagtgtaaattccagttcctgcaccgcgtcggcagggtcggccgc
tcgcaagccagggggctggcaatcgttatcgcaagcaccgcacccgagcgtgtctggtac
cacacctgcaccgggcggacacagggagggggcgccaaatcgcgtttcaaggcggcgtcg
gtgtgccgcaactacgacaccgttgatcgcggcggatgcacaacaatacaggacgagccc
gcgtacatggcggaggtgcacaagcttgtgcccccgggcagggaaatcgggaccatagac
cccaacgtgctccagcttccgccgttaggaggcacgcagtacggcgaggccacgatgtca
atgcaacacacggagttccaggggcccatgcaggaactatacagagcgtcacagcggcgg
tacctcgtgaacattcaccgctccttctag
DBGET
integrated database retrieval system
