KEGG   Babesia bigemina: BBBOND_0313690
Entry
BBBOND_0313690    CDS       T08062                                 
Name
(RefSeq) RNA polymerase Rpb5, N-terminal domain containing protein, putative
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
bbig  Babesia bigemina
Pathway
bbig03020  RNA polymerase
bbig03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bbig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BBBOND_0313690
  09124 Replication and repair
   03420 Nucleotide excision repair
    BBBOND_0313690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbig03021]
    BBBOND_0313690
   03400 DNA repair and recombination proteins [BR:bbig03400]
    BBBOND_0313690
Transcription machinery [BR:bbig03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     BBBOND_0313690
  RNA polymerase III system
   RNA polymerase III
     BBBOND_0313690
  RNA polymerase I system
   RNA polymerase I
     BBBOND_0313690
DNA repair and recombination proteins [BR:bbig03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      BBBOND_0313690
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C Mrr_cat NA-iREase1 DUF4712 DUF4811 RC-P840_PscD Sof1
Other DBs
NCBI-GeneID: 24566008
NCBI-ProteinID: XP_012769653
UniProt: A0A061DBW4
LinkDB
Position
III:3344663..3345386
AA seq 190 aa
MDDEEGRLFRCRRTCCEMLEDRGYFIPNQEKLETFQEFKARYELYDKVRSKMLLVASLKT
DKNTKLLVYFADETKKTGVKPIRELTEKMEDHDIHRAILVTQNVLTPFAKDAILEAAPRN
IIENFLETELLVNITKHELVPKHIPLTMDEKQTLLQRYKVKESQIPRIQAADPVARYFGL
TKGQVAAPIM
NT seq 573 nt   +upstreamnt  +downstreamnt
atggatgacgaggaggggagactattccgctgcagaaggacctgctgcgaaatgctggag
gaccgcggatacttcatcccaaaccaggaaaaactggagaccttccaggagttcaaagcg
agatacgagctttacgacaaagtgcggtccaaaatgttgctggttgcgtcgctcaagacc
gataagaacaccaagctcctggtctacttcgccgacgaaaccaagaaaaccggtgtcaag
ccaataagagagctcacggagaaaatggaggaccacgacattcacagagccatattggtc
acgcaaaacgtgctaacgcccttcgcaaaggatgcgatactcgaggcagcgcccaggaat
atcatcgaaaacttccttgaaactgagctgctggttaacatcacgaagcacgaattggtg
ccgaagcacataccgctcaccatggacgaaaagcagacgctactgcaacgatacaaggtc
aaagagagtcaaataccgcgcatacaggccgcagacccggtggcgaggtacttcggactc
acaaaaggacaggtagcggcgcccatcatgtag

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