Babesia bigemina: BBBOND_0400290
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Entry
BBBOND_0400290 CDS
T08062
Name
(RefSeq) processing splicing factor 8, putative
KO
K12856
pre-mRNA-processing factor 8
Organism
bbig
Babesia bigemina
Pathway
bbig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BBBOND_0400290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbig03041
]
BBBOND_0400290
Spliceosome [BR:
bbig03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
BBBOND_0400290
Complex C
U5 SnRNP specific factors
BBBOND_0400290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
Motif
Other DBs
NCBI-GeneID:
24566078
NCBI-ProteinID:
XP_012769723
UniProt:
A0A061DC14
LinkDB
All DBs
Position
IV:<95298..>102416
Genome browser
AA seq
2372 aa
AA seq
DB search
MGVPAPPGMAINCGGLPPGYNVGYTHKTEFEILQDKARKWQKLNTRRFTKTSAAPLATYA
APMPPEHLRKVFREHGDMSNRKYRYDKRVYLGALKYVPHAVYKLLENMPMPWEQLRNVRV
LYHITGAITFVDEIPWVVDPIFLAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDY
SENILDVEPLEAIQMQLDPEEDAAVMNWFYDSKPLQYESKMINGPSYRRWFLTVEQMGVL
YRLAGQLFSDIQDDNYFYLFNLKAFYTAKALNTAIPGGPKFEPLFRDAQEDEDWNEFNDV
SKIIIRQQIRTEYKIAFPYLYCNRPRKVAIAPYHTKLCAYVKQDDPDLPVFYYDPVINPI
PAYTIKDGNVREYDSEDWDRSDATDPCSKPNSFVSCSAAETLNDGVENNKNGDISYSSPD
AGTNFPRGVVPLLATVPLESDNTSNGVALCWAPHPFNKRSGNCRRAIDLPIVQSWFREHV
PASHPVKVRVSYQKLLKGWVLSNLHSRRPKSMKKRKLFKLFRATKFFQTTEMDWVEVGLQ
VCRQGYNMLNLLIHRKNLTYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTK
LVVDSHAQYRLGNVDAYQLADGLQYIFAHVGQLTGMYRYKYRLMRQVRMCKDLKHLIYYR
FNTGSVGKGPGCGFWVCGWRVWCFFLRGIMPLLERWLGNLLARQFEGRVSKGVAKTVTKQ
RVESHFDLELRAAVMHDILDMMPEGIRANKARTILQHLSEAWRCWKANIPWKVPEMPAAI
ENMILRYVKMKADWWTNASYYNRERIKRGATVDKTVCKKNLGRLTRLWLKSEQERQHGYL
KDGPYITGEEAVAIYTTAVHWLESRKFSHIPFPPLNYKHDTKLLILALERLKEPYSTKGR
LNQNQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVTIEFMDLYSHLIPVYDIDPLE
KITDAYLSQYLWFEGDARGLFPNWIKPADSEPPPLLVYKFCQGINNLTDVWNYEDQHLVL
LQSKFDRVYEKIDLTLLNRLLRLIVDHNVADYITAKNNVSICFKDMSHINSFGFIRGLQF
GSFVFQYYGLILDLLLLGLTRATEIAGPTSMPNDFLSFTDVETETRHPIRLYCRYIDRIF
VLFKFTSTETRDLVQRYLTENPDPNNENVVGYNNKSCWPKDSRMRLMKHDVNLGRATFWE
MQARLPRSVTTLEWTDSFVSVYGKDNPNLLFNMCGFEVRIFPKIRWLKSGASQGEACWKL
QNERTKELAATAYLRVDADGMSAFENRIRQILMASGSTTFTKIANKWNTALIGMMTYYRE
AVIHTNELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHILIP
QSDLKYSKQTDTGITHFRSGMSHEEDQLIPNLYRYIQTWESEFIESQRVWAEYALKRQEA
QAQSRRLTIEDLEDSFDRGIPRINTLFQKDRHTLAYDKGWRVQQDFKQYHIMKANPFWWT
HQKHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFATWEGLFWEKASGFEESMKYK
RLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQI
FRAHLWQKIHESLVMDLCQVLDLELDALEIETVQKETIHPRKSYKMNSSCADILLFAAYK
WHVGKPSLLTDADVGEATTSTNKFWIDVQLRWGDYDSHDIERYCRAKFLDYTTDSMSIYP
CPTGCLIGVDLAYNMHSGFGYWFPGMKTLCGRAMNKIMKANPAMFVLRERIRKGLQLYSS
EPAEPYLSSQNFGELFGSQTIWFVDDTNVYRVTIHKTFEGNLTTKPVNGAIFVFNPKTGQ
LFLKIIHTSVWAGQKRLSQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHL
LDFPNIVIKGSELQLPYQSIMKLEKFGDMILRATQPEMVLFNLYDDWLKSISSYTAFSRL
ILILRAMHVNCDRAKVLLKPSKTTVTLPHHVWPSLTDAEWINCEVALKDLILADYAKRNG
VNATSLTQSEIRDIILGMEISPPDIQRQELEENRNDAAAKTVTTRSVNVHGDEIIVTTQS
PHEQKVFASKTDWRNRCLAAGLLHRRLEGLSVESVDSEDTVVIPHNLIRKLIMVSDLRTA
VAVYLYGKISSVDGEPDQATNDGSRGGGSHVREVTCMVFVPQVGNQYTVDLPKQGPQHEA
LDGLEPLGWLITRPTDGSVASEVVETHRRLQNDLSWDVASILCTCTFVRGSCAFLAHRLT
PDALISKDVSNTSALLTAVQVLISDKYKGFFLVPVDEAWNYNFMGAKHSLHMHYQLQVEV
PRPFYDPVHRPLHFIQFAQANESKDFELENPL
NT seq
7119 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgccagctccgcccggaatggctattaattgtggcggactgccgcctgggtac
aacgttggatatactcacaagaccgagtttgagattctgcaagacaaggcacgtaaatgg
cagaagttgaacactagaaggtttacaaaaacttcagctgctcctttggcaacatatgcc
gccccgatgcccccggagcatcttcggaaggttttccgggagcacggcgacatgagtaat
cggaaataccggtatgacaagcgtgtttatctgggagcgctgaaatatgtacctcatgct
gtatacaagttgttggagaacatgccgatgccttgggaacagttgcgtaatgtacgagtt
ctctatcacattacgggtgcgataactttcgtcgacgagataccttgggttgtggatccc
atatttttggcacaatgggggactatgtggattatgatgcgccgagaaaagcgtgatcgt
cgtcatttcaagcgtatgaggttccccccctttgatgatgaggaacctcctcttgattac
agcgagaacatcctcgatgtggaacctttggaagccatccagatgcagctcgatcccgaa
gaggatgcggctgttatgaactggttttacgactcaaaaccacttcagtacgagtcgaaa
atgataaatggcccaagttaccgtcgttggtttctcacggtagaacaaatgggggtatta
tatcgcctggccggtcagctattctcagatatacaagatgacaattacttctatctattc
aatttaaaagcgttttatacagcgaaggcacttaacacggcaattccaggaggtccgaaa
ttcgagcctctttttcgtgatgcgcaggaggacgaagactggaacgagttcaatgatgtc
tccaaaattatcattcgtcagcaaattcgtactgaatacaagatcgcattcccctatttg
tattgcaacaggccgcgtaaagttgccattgcgccttaccacaccaagttatgcgcgtat
gttaagcaggatgacccggatctacctgttttctactatgatcctgtcataaaccctata
cctgcgtatacaataaaggatggtaatgtcagagaatacgattctgaggactgggataga
agtgatgctacagatccttgctctaagcctaactccttcgttagctgctctgctgccgaa
acattgaatgacggagtcgagaacaataaaaatggcgacatttcgtattcttcaccggat
gcaggaactaatttcccaagaggcgtcgttccgcttctggcgacggttccattggaaagc
gataacacgtcgaatggcgtcgcactatgttgggccccacatcccttcaacaagcgctct
ggcaactgccgtcgtgccatcgatttgccgatagtgcagtcgtggttccgcgagcatgtt
ccggcgtctcatccggtaaaggttcgtgtatcttatcagaaactccttaagggttgggtt
ctgagcaatctgcattcgcgcagaccgaagagcatgaaaaaaagaaagctgtttaagctt
ttcagagcaacaaagtttttccaaactacggagatggattgggtggaggttgggttacaa
gtttgtcgccagggttataacatgcttaatcttttgattcatcgcaagaatttgacgtat
ctgcatttagattataacttcaacttgaaacctgtgaagactctaacaacgaaggaacgc
aagaaatcgcgttttggtaacgcttttcacctgtgccgcgaaatattgcggttgaccaag
ctagtagtggattcccacgcgcagtatcgattaggaaatgtcgatgcatatcagcttgca
gatgggttgcagtatatatttgctcatgtgggccagttaaccggtatgtatcgttacaag
tataggctgatgcgtcaggtccgcatgtgcaaagacttaaagcacctgatttactaccga
tttaacacgggttcggttggtaaaggacccggctgcggtttctgggtctgtggttggcgt
gtatggtgttttttcctgcgtggtatcatgcctttgcttgagcgttggcttggtaacctt
ctggctcgccagtttgagggcagggtgtctaagggtgtcgcaaaaacagtcacgaaacaa
cgtgtggagtctcacttcgatcttgagctgcgtgccgctgtcatgcacgatatcctggat
atgatgcccgaaggcattcgtgccaacaaagcgcgcactattcttcaacacctaagtgaa
gcatggcgttgttggaaagccaacattccgtggaaggtgcctgagatgcctgcggcaatt
gaaaacatgatccttcgctacgtaaagatgaaggctgattggtggacgaacgcttcttac
tataacagagaacgcattaaaaggggggccaccgtcgacaagacagtgtgcaaaaaaaat
cttgggcgtctaactcgtttgtggctgaagtccgaacaggagcgccagcacggatacctc
aaggatggcccctacattactggtgaagaagcagtagcaatatacacgactgctgttcat
tggttggaatcacgtaaattttcacacattccttttcccccgttgaactacaaacacgac
acgaagctcttgattttggcattggagcggttgaaggagccgtattcgacaaaaggccgt
ctgaatcaaaaccagagagaggaattgggtttaatagaacaagcatatgataatccacac
gaagctctgagtcgtattaagagacatttgcttacacagcgtgcttttaaagaggttacg
atagagttcatggatctctatagccacttgattcccgtgtatgacattgatccactggag
aaaataaccgatgcgtacctgagtcagtacctatggttcgaaggggatgcgcgtgggtta
ttcccgaattggatcaaaccggcggacagcgaacctccaccgttgttggtgtacaagttc
tgtcagggaatcaataacctcactgacgtatggaattatgaagatcagcacttagtgctc
ttgcagagtaagtttgatcgtgtttatgagaagatcgaccttactttgcttaataggctt
ctacggttgattgtggaccacaatgttgcggactatattacggctaaaaacaatgtcagc
atttgctttaaggatatgagccatataaacagtttcggatttatacgcggtttacaattc
ggcagcttcgttttccagtattatggtctgatattagatttgctgttactgggactaacg
cgtgctaccgagatcgccggtccaacttcgatgcccaatgactttctcagttttacggac
gttgaaacagaaactagacaccctatcaggctgtattgccgttacatcgacaggatattt
gtgctgttcaagtttacaagcaccgaaacacgtgatctggtgcaacgatacttgaccgag
aaccctgatcccaataatgagaatgtagtaggttacaacaacaagtcatgttggcccaaa
gatagccgtatgcgcttaatgaagcacgatgtgaatcttggtcgtgctacattttgggaa
atgcaagcacggctacctcgatctgtgacgacattggaatggactgattcgtttgtatct
gtatacggcaaggataacccaaacttactttttaacatgtgtggttttgaggtgaggata
ttccccaaaatcagatggttgaaaagtggcgcatcgcagggtgaagcatgttggaaatta
cagaatgagagaaccaaagagcttgcagccactgcgtacttacgtgttgatgcggatgga
atgagcgctttcgaaaatcgcatcaggcagatccttatggctagtggaagcaccaccttc
acaaaaatagccaataagtggaacacagcattaatcggtatgatgacatactatagggag
gccgttattcacactaacgaactcctagatttgttagtgaaatgcgaaaataagattcag
actcgtattaagataggtttgaattcaaagatgccttcacgtttccctccagtggttttc
tatactccaaaggaattgggtggtcttggaatgctttctatgggtcatattttgataccc
cagtctgacctgaagtatagcaagcagacggatacaggcataactcatttccgcagcggt
atgtcacacgaggaggaccaactgattcccaatctataccgttacattcagacatgggaa
agcgagttcattgaaagccaacgcgtgtgggcagaatacgccttaaagcgtcaagaagct
caggcacaaagtcgccgtctaaccattgaagacctcgaagactcgtttgaccgcggtatt
ccacgcatcaacacactgttccagaaggacaggcacacgttggcatatgataagggttgg
agagtccagcaagacttcaagcaatatcatataatgaaagcaaatccattttggtggacc
catcaaaaacacgacggtaagttgtggaatttgaataactatcgcactgacatgattcaa
gcgttgggaggagtggaaggtattttagaacacacactttttaagggtacatacttcgca
acgtgggaaggtcttttctgggagaaagcatctggtttcgaagaatccatgaagtacaaa
cggctcacaaatgcgcaaagaagcggtttgaaccagattccgaatcgcagatttacactg
tggtggtcaccgacaattaatagggcgaatgtgtatgtaggttttcaggtgcaattagat
ctcaccggtatattcatgcacggcaaaatacctactctcaagatttcgttgattcagata
ttccgggcgcatttgtggcagaagattcatgaatccctggttatggatttatgtcaggtg
ttggacctggagctcgacgctctggagattgagacagtacaaaaggagactattcacccc
cgtaaatcatataagatgaacagtagttgtgcggacattttgttgtttgcagcatataag
tggcatgtgggcaagccaagtttgctgactgatgccgatgttggagaggcaactacgtct
acgaataagttctggatagatgtccagcttaggtggggtgactatgatagccacgatatt
gaacgatactgtcgtgctaaatttttggactacacaacggacagcatgtcgatttatccg
tgtccaaccgggtgtctgattggtgtggatctggcatacaacatgcacagcggttttggg
tactggttcccagggatgaagactctatgcggtcgagcaatgaataagattatgaaggca
aaccctgcgatgttcgtattgcgcgagcgaattcgcaagggtttgcagctctattctagc
gagcccgctgaaccgtacttgtcatcgcagaatttcggtgaactgtttggatctcagact
atatggtttgttgatgacaccaacgtgtacagagtgactattcacaaaacgtttgaaggc
aacctgacaacaaaaccagtaaatggcgctattttcgtatttaacccgaaaacgggtcag
ctgtttttgaagataattcacacgtcagtgtgggccggtcagaaacgcctaagccagctg
gccaaatggaaaactgcggaagaagttgcagcgttgatccgttctttacctgtagaagaa
caacccaagcagatcattgtgactaggaagggtatgcttgacccacttgaagtgcatttg
cttgacttcccaaatatagtcataaaggggagtgaattgcagctgccatatcagtcaata
atgaagcttgaaaagttcggagacatgattttacgcgcgactcaacccgaaatggttctt
ttcaacctgtatgacgattggctaaagagcatcagtagttacacagctttcagccgttta
atactgattctcagagcgatgcatgttaattgcgatcgcgccaaagtgctgttaaaaccg
tctaaaactacagtgaccctgccacaccatgtttggccaagtttgacggacgctgagtgg
ataaactgcgaagttgcgctgaaggacctgattttggctgattacgcgaaacgcaacggc
gtgaatgccacaagtctgacacagagtgagatacgtgatataatattgggaatggagatt
tccccgccagatatacaacgccaggagcttgaggagaatcgcaatgatgcagctgcaaag
acagttaccactcgttccgtgaacgtgcacggagatgagatcatagtgacaacgcagagt
ccacatgagcagaaggtgttcgccagtaagaccgattggcgtaatcggtgtttggctgct
ggtttgctccaccgtcggcttgaaggtttgtctgttgagagcgtagactctgaggatacc
gttgttattccacataatctaatcaggaagctgattatggtatccgatctgcgcacggca
gtggctgtgtatttgtacgggaaaatatcaagcgttgacggtgagcccgatcaagccaca
aatgatggttcccgcggaggtggcagccatgtaagggaagtgacgtgcatggtttttgtg
ccccaggtaggtaaccagtatactgtcgatttaccgaagcaagggccacaacatgaggca
ctggatggattagaaccattgggatggttgatcacgcgccccacggatggcagcgtagcg
tcggaagttgttgagacacacagacgtctacaaaatgacctaagctgggatgttgcatcg
atcctttgtacgtgtactttcgtccgaggtagctgtgcgtttttggctcaccggttgact
cccgatgcgttaataagcaaggatgtttcaaacaccagcgcactcctaactgcagttcag
gtgttgatttccgacaagtacaagggtttcttccttgtacctgtagatgaggcgtggaac
tacaatttcatgggtgcaaagcattcgctacacatgcactatcaactgcaagtcgaggtt
cccaggccattttatgaccctgtacaccgcccattgcacttcatacagtttgctcaagct
aacgaatcgaaggattttgaactcgagaaccctttgtaa
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integrated database retrieval system
