Babesia bigemina: BBBOND_0402580
Help
Entry
BBBOND_0402580 CDS
T08062
Name
(RefSeq) DNA-directed RNA polymerase, alpha subunit, putative
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bbig
Babesia bigemina
Pathway
bbig03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBBOND_0402580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbig03021
]
BBBOND_0402580
03400 DNA repair and recombination proteins [BR:
bbig03400
]
BBBOND_0402580
Enzymes [BR:
bbig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBBOND_0402580
Transcription machinery [BR:
bbig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBBOND_0402580
DNA repair and recombination proteins [BR:
bbig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBBOND_0402580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
HHH_5
PSD3
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
24566311
NCBI-ProteinID:
XP_012769956
UniProt:
A0A061DES1
LinkDB
All DBs
Position
IV:567193..569400
Genome browser
AA seq
676 aa
AA seq
DB search
MKNAGFISLVFFSLFSDLVDSIAVRDKNPCAAPTLALRLTPQLFITRHRRALEACYTCNP
QRLPIRLHGSRRAGRLRIRALNPEKAELHPESLSGVEPSVTAERIDELKRKGIIEGESHT
WRNWHVVTQGQWPDIGQPVLPKSARNPSITEPYALRKPLEYWGFLRGVDTNITSYPLVWE
FYNDTYGKVDVAAYGGSNPLYTPSMFQPTWFMEEDRGGLGYNDCRIFGGWIGLDLDSPTK
VKTASELISIPDTGRLYQKFYLGPYPITMGWTIGSLLKVLTLSRSPGHGVVAVKIHNMRE
DTTIPGVVDDLLNIALNLNGVALETLKPGEEARVRMLLRGPAMVCAGSLEWPSFVRVASP
DTYIAKIEEGGELDIELKIEWGRGVWLADDKGLYRQEEGADGVCMKRRWIKEVQEEGFYP
MTTFFGGCRMVRLAVHKLLGQRWDIISNSCPDPREQLVVEVWTDRSTTPKAALEFGLLES
LAWLRELKRQLSQDVDFDGEDEQLRDTWEKIDKYQALQHRQDLMGGPPVYNLHELNLSPP
VKESDCEYIGTPDDVKEIPQAPYSLPKIPPNRPQKDTLEWLADELQVEEYTDPSPINARN
FEKFTSPPEDAAAAVDVSVLPVAPEVIASLRMCGFNNVGDMVSLSSSELERYPDVSPEDA
ERIVAFIRTNLKLQPP
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgcaggcttcatttcattagtatttttttcacttttctctgatctcgtggac
tctattgccgtgcgagataagaatccatgtgcagccccgaccttggcgttacgactaacg
ccgcagctcttcatcactcgacacagaagagcactcgaagcttgctacacatgtaatccg
cagcgtttgcccatccggcttcacggcagccgccgagctgggcggctgcgaatccgggcg
ctgaacccggagaaggctgagctacatcccgagtcgctgagcggtgttgagccatcggtt
accgcagaacgcattgatgagctcaaacgcaagggcatcattgaaggcgagagccacacg
tggaggaattggcatgtagtcacccaggggcaatggccagacatcggccaaccggtactt
cccaagtcggcgcggaatccgtcgataacggagccctatgctctgcgcaagccgctggag
tattggggttttttgcgcggcgtggatacgaacatcacctcctatccgctggtttgggag
ttctacaacgacacctacggaaaggttgacgtagctgcatatggcggcagcaaccccctg
tacaccccgtcgatgttccagccgacgtggtttatggaggaggaccgtggcggcctgggc
tacaatgactgcaggatctttggcggctggatcggcctggacctcgactcacctactaag
gtgaaaaccgctagcgagctcatctctatccccgacaccggccggctctaccaaaagttt
tacctcggtccatatccaatcaccatgggctggactataggctcattgctgaaggtgttg
accctgtctcgtagccctggccacggcgttgttgccgttaaaattcacaacatgcgggaa
gacactaccatccctggcgtagtggacgatctgctgaatatcgcacttaatttgaatggg
gtagcgctggagacgctaaaaccgggtgaggaggcgcgcgtacgcatgctgcttcgtggc
cctgctatggtgtgcgcgggaagtctcgaatggccatcgtttgtgcgggttgcgtcacca
gacacgtacatcgcgaagatcgaagagggcggcgaacttgatatagagctgaaaatcgaa
tggggccggggggtctggcttgctgacgataaaggtctgtaccgtcaggaggagggcgca
gacggtgtgtgcatgaagcgccgttggataaaagaagtccaggaagagggtttttaccct
atgacaactttcttcggcgggtgtcgcatggttcgattggctgtgcacaaactgctcggc
caacgctgggacataatctccaactcgtgccccgacccacgcgagcaactcgtggtggag
gtgtggacggaccgttccaccaccccgaaagcagcgttggagttcggtttgctggagagc
cttgcgtggctgagggagctcaagcggcagctgtcgcaggacgtagattttgacggcgag
gacgagcaactgcgtgacacatgggagaagatcgacaagtatcaggctcttcagcaccgt
caagacttgatgggtggccctcccgtgtacaacttgcacgaattgaatctgtcgcctccg
gtgaaagagtctgactgcgagtacattggtacccccgacgacgtcaaggagataccgcag
gccccgtactccctgccgaagattccacccaatcgaccacagaaggacacgcttgagtgg
ctggccgacgagctgcaggtggaggagtacaccgatccttctcccattaacgcgcggaac
ttcgagaaattcactagcccgcccgaggacgcagctgccgccgtcgacgtctccgtgctc
ccagtcgcgcccgaagtcattgcgtcgttgcgcatgtgcggatttaataatgtaggggac
atggtctcgctgtcatcctcggagctggaacgctaccccgacgtatctcccgaggatgcc
gagcggattgtggcgttcatcaggaccaacctgaaactccagcctccatga
DBGET
integrated database retrieval system
