Babesia bigemina: BBBOND_0402620
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Entry
BBBOND_0402620 CDS
T08062
Name
(RefSeq) -mRNA 3'-end-processing protein RNA14
KO
K14408
cleavage stimulation factor subunit 3
Organism
bbig
Babesia bigemina
Pathway
bbig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BBBOND_0402620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbig03019
]
BBBOND_0402620
Messenger RNA biogenesis [BR:
bbig03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
BBBOND_0402620
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
FAT
Motif
Other DBs
NCBI-GeneID:
24566315
NCBI-ProteinID:
XP_012769960
UniProt:
A0A061DDX8
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Position
IV:<580012..>583089
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AA seq
889 aa
AA seq
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MEEQGKPQPARVVTANKLLHSVLHGSSPLLPPMLNGVKPKNEPGKAVLLESIEDDQVWFT
YIKASKDGGLLEEACRVFPNYWKAHHRCALYHVYHKQTRKAFDAYVSAMKEMDDYDLYIC
YLKFLYCMASVHEYIAGLFTAVDKVGMDLRSDPLWRELIVVLVKIYNCNLMDHNVHTGLL
PNLFPPDSETVSVSIPLYPSETEQVVFRGVNSLDKGEQTYVQLYGDVNHIRKMFHRWLRS
PTNNLKQALDGYSAFENIASAANVLCTKLLSEAKTTYETSVAVYEKLSGMYRNVLPAQPA
RRRQLNAEQTAEQQRQVGFWTEIIKYEESNPLGLPASELAARVLFTLRGALSPHIFSDSL
WYMYFQFLLANDRREKAVETLRYAIRNYLQDDGKMQFVLAAYLDDGGESAATEFGRLIDP
GLRLVEDGETGADETQLRHILRFDASDSSTAVQPARLIHYLNYVRRNLGRVKWHEDLQVI
LTKRELLSWELYWYAADTEVRCFGDVDAAAAFLSEAQQSLPFDMHYTMLHLRFLLNMGRL
VDARVLLTQLVVGANVAGETKCKPTASDKIALWHFWLHTEYFYGTKAQFTQVRSLFVQFR
VASEVGLDVFAEKSHRNGVSTIRQIFGNIGPSFIKAHMDSSKRVATADMHAVVELRKHLF
CVGLEYDDLDRVFFFATRRPEVAVEKAASSEKEAEKYISPSNFAHRSEPDQDSTRRHVFI
TRPDVAALAPLDPHNVIPVESMITLHGGKRPPLPDAAKPMDTVATPPKVLFDLLRVLPNP
NPRGPFPKMYGNAEAIDHLIRSLECAGLKDVQLLDYQPIPVNQLLHLKKVGASDSQNIEE
SVESAAKEGAFELNNGLFSILRFVEGHVGADEASRLRAKRASKKQKLAI
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcagggcaagccgcagcccgccagggttgtgacggcgaacaagctgctccac
tccgtcctacacggcagttcgccgcttcttccacccatgttaaacggcgttaagccgaag
aatgaaccggggaaggcggtgttgttggagtcgattgaggatgaccaggtttggttcacc
tacattaaggcttccaaggatggagggctgctggaggaggcatgtcgtgtctttcctaac
tattggaaggcccatcaccgctgtgcgctgtaccacgtctaccacaagcagacgcgtaag
gccttcgacgcctacgtcagtgcaatgaaggagatggatgattacgacctctacatatgc
tacctcaagttcctctactgcatggcttcagtacacgagtatatcgcagggctcttcacc
gcggtggacaaggttggcatggacctgcggtccgacccgctgtggagggagctgattgta
gtgctggtgaagatctacaactgcaacctcatggaccacaatgtgcacaccggattgctg
ccaaacctcttccctcccgactccgaaacggtgtcggtatcgatccctctgtacccgtcc
gaaacggagcaggtggtctttcgcggcgtgaacagcctggacaagggcgagcagacctac
gtgcagctatacggcgacgtgaaccacattcgtaagatgttccacaggtggctacggtcg
cctactaacaacctgaagcaagccctggatggctattcggccttcgagaatatcgcaagc
gcagccaatgtgctttgcacgaagctgctctctgaggccaagacaacctatgagacgtcg
gttgcagtatatgagaagctctccgggatgtacagaaatgtgcttcctgcgcagcccgcc
aggaggcgccagcttaacgccgagcaaacggccgaacagcagcgtcaggtcgggttctgg
acagagatcattaagtacgaggagagcaaccccctcggccttcccgcctccgaactggcc
gccagggtcttattcacgctccgaggcgccttgtcgccgcacatattctcagacagcctt
tggtacatgtacttccagttcctgctggcgaacgaccggcgtgagaaagctgtcgaaacg
ctgcgttacgcgatacgcaactacttgcaggacgacggaaagatgcagtttgtactggct
gcctatttggacgacggcggcgagtccgcggccacagagttcgggaggctgatagacccc
ggtctgcgcctcgttgaggatggcgagaccggcgccgacgagacgcagctgcggcacatc
ctgcggttcgacgcgtcggactcctccaccgcggtgcagccggccaggctcatccactac
ctcaactacgtccgtcgcaacctggggcgcgtgaagtggcacgaagacctgcaggtgatc
ctcactaagcgcgagctgctcagctgggagctgtactggtacgcggccgacaccgaggtc
cgttgcttcggcgacgtggacgccgcagccgccttcctcagcgaggcccagcagagtctg
cccttcgacatgcactacaccatgcttcacctgaggttcctgctcaacatgggtcgtctc
gtagatgcacgtgtgctgctgacccagcttgtggtgggcgcgaatgtggctggtgagacc
aagtgcaaaccaaccgcgtccgataaaatcgcattgtggcacttttggctccacacggag
tatttctacggaaccaaggcgcagttcacgcaagtgagatcgctgttcgtgcagttccgc
gtcgcgtctgaggtgggcttggacgtcttcgcggagaagtcgcaccgcaacggcgtcagc
accattcgccagatcttcggcaacataggcccttctttcataaaagcccacatggattcc
agcaagcgggtggcaactgcggacatgcacgctgtggtagagctgcgcaagcaccttttc
tgcgtcggcctggaatacgacgacctggacagggtcttcttcttcgccaccaggcgcccc
gaggtcgctgtggagaaagccgccagctccgaaaaggaggccgagaagtacatatcgccg
tccaacttcgcgcatcgttctgaacccgaccaggacagcacccgccgccacgtgttcatc
accagacccgacgtggccgcgcttgctccgctcgacccccacaacgtcatccccgttgag
tctatgatcacgttgcacggcggcaaacgcccgccgctgcccgatgcggccaaacccatg
gatacagtcgccactccgccgaaggtgctcttcgacttgctgcgcgtgctgcccaacccc
aaccccaggggacctttccccaagatgtacggaaacgctgaagccatagaccacctgata
cgctcgctggagtgcgccggcttaaaggacgtgcaacttctggactaccagccgatcccc
gtgaaccagctgctgcacctgaagaaagtcggtgcatccgacagccaaaacatcgaggag
tccgtcgagtccgccgccaaagagggcgcctttgagctaaacaacggactgttttcgatc
ctccgcttcgtcgagggccacgtaggcgcggacgaagccagccgcttgagggcaaagcga
gcgtctaagaagcagaaactagctatatga
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