Babesia bigemina: BBBOND_0403330
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Entry
BBBOND_0403330 CDS
T08062
Name
(RefSeq) XBA-binding protein 2, putative
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
bbig
Babesia bigemina
Pathway
bbig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BBBOND_0403330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbig03019
]
BBBOND_0403330
03041 Spliceosome [BR:
bbig03041
]
BBBOND_0403330
Messenger RNA biogenesis [BR:
bbig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
BBBOND_0403330
Spliceosome [BR:
bbig03041
]
Complex B
Other components
Prp19-related factors
BBBOND_0403330
Complex C
BBBOND_0403330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_N
HAT_PRP39_C
TPR_8
Suf
TPR_12
TPR_2
Mad3_BUB1_I
RPN7
Motif
Other DBs
NCBI-GeneID:
24566386
NCBI-ProteinID:
XP_012770031
UniProt:
A0A061DET6
LinkDB
All DBs
Position
IV:complement(728325..730803)
Genome browser
AA seq
813 aa
AA seq
DB search
MAQKWPSGHTGAGGDVYDAAAYLDTTYDRKKHEELAALYDERFHKEIDRYPDLCKPWVDH
IALLKSLRQPGSNARVYRIKDICILETVASEVPHHNDGTATSGQERGNDPITERILATYE
RAVKYVPLSYKVWYGYIRDSIEAIKAPFYANPAAYLRINRVFENCLVHVYAAPAIYLLYG
QFLRTQNMITRARRTYDRALLNLPITQHAMIWNHYLQFVKEVDLLPMGRAVLRRYIQLKP
NHRETLYELLKRHKQYDEACVVLCELLNDDKFVSESGKSQYDLWVELCELVRDNSHHIHS
IPIDDIIKEGIGKYSDQVAQLWVILADIHILRGQMHSARDVYEEALKSVTTVQDFSTIFE
VYARFLEKLAKERKKTAGAATDVIITVDRLENLINTRAILMANVKLKQNVHNVYNWLHYA
QLMQNDPNKTQQIFEQAVAAVDPKRSVGRVTELWTAYASHFESSGDIDAADHVYEKAVEG
NFKYVDDLASIWCAWVEMHLRNQNFRRALDLARQAIDVRNKKDPNHVQQRLYRSVKLWSL
CLDLEQNLGTIATCRSTFDLMVELKVVTPQIALNFATFLEDNRYFEAAFSVFEKCVALFK
WPQLYYLYLPYLTKFVNRYHGSKLERARDIFDHCLNPGQDSKTGDVPAQYVKYLYFLYAH
MEEEFGLVRRCLGILKDATKCADKGDQLTMIKLYLAKTAEFYGIVQTRNIYQECLEFVDD
EYARELCGMYIQMERGLGEIDRARAIFIYCAQLCDPEKHEQFWKDWREFEVLHGNEECFR
EMLRIKRSVQAKYSKVHFNTEEIDVERDQPRGT
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaagtggccatccgggcacacgggcgccggcggcgatgtctacgacgccgcg
gcatacctggataccacatatgatcgcaaaaaacacgaggaactggcggcactgtacgac
gaacgattccataaggaaatagacaggtacccggacctgtgcaagccatgggtggaccac
atcgcactcctcaagtcgctgaggcagcctggcagcaacgccagggtgtaccggataaag
gatatatgcatactcgagactgtggcgtccgaagtgccacaccataacgatggtacggct
acaagtggtcaggaacgtggtaacgacccaatcaccgaaaggattctggccacctatgaa
cgggcggtaaagtacgtgccgctgagttacaaagtatggtacggctacattagggacagc
atagaggccatcaaagcgcctttctatgcaaacccggccgcgtatctgcgcatcaaccgg
gtgtttgaaaactgtctggttcatgtctacgccgcgccggcgatatacctgctctacggg
cagttcctccgcacgcagaacatgatcacgcgcgcaaggcgcacgtacgatcgagcgttg
ctcaacctgcccattactcagcatgcgatgatctggaaccactacctccagttcgtcaag
gaggtggacctgctgccgatggggagggcggtgctcaggcgctacatccagctcaagccc
aaccacagggaaacgctgtacgaattgctgaaacggcacaagcagtatgatgaggcctgt
gtggtgctctgtgagttgctgaatgacgacaagttcgtctccgaaagcggcaagtcgcag
tatgacctgtgggtggaactctgcgagcttgtcagagacaactcccaccacatacacagc
atcccgatcgacgatatcataaaggagggaatcggaaagtacagcgaccaggtcgcccag
ctttgggttatactggctgacatacatatactgagggggcagatgcacagcgcacgcgac
gtgtatgaggaggcattgaagtcggtcacaacggtgcaagacttctcaacaatcttcgaa
gtgtacgcgaggttcctggaaaagttagccaaagagcgtaagaaaaccgcgggagccgca
accgacgtcataatcaccgtggacaggctggagaacctcatcaacacacgcgccattctc
atggcaaacgtcaaattgaagcagaacgtccacaacgtctacaactggctgcactacgca
cagctcatgcagaacgaccctaacaaaacgcagcaaatatttgaacaggctgtagctgca
gtggaccccaagcggtcagtgggcagggtcaccgaactgtggaccgcatatgcttcgcat
ttcgaatcgtccggagacatcgacgcggctgatcacgtgtacgaaaaggctgtggagggg
aatttcaagtatgtggacgatttggcctccatctggtgcgcttgggtggaaatgcacctg
aggaaccagaacttcagaagagcgttggatttagcgaggcaggctattgatgtgaggaac
aaaaaggatccaaaccatgtgcagcagcggctgtatcggtcggtaaagctctggagtctg
tgtttggacctggagcagaacctggggaccatcgcaacctgcaggtcaacgtttgacctc
atggtcgaactcaaggtggtgacgccgcaaattgcgctcaatttcgccacctttctggag
gacaatagatactttgaagccgctttcagcgtattcgagaaatgtgtcgctctgtttaag
tggccgcagctctactacctctacctgccgtacctcaccaagtttgtcaacaggtaccac
ggaagcaaactggagcgtgcacgcgacatattcgaccattgcttaaatccggggcaggac
tccaaaactggagacgtgcccgcgcagtacgtcaagtacctgtacttcctctacgcccac
atggaggaggagttcgggctagtcaggcgctgcctagggatattgaaagacgcgaccaag
tgcgcggacaagggtgaccaactcaccatgatcaagttgtacctggccaaaacagccgaa
ttttacggaatagtgcaaacaagaaacatataccaggagtgcctcgaattcgtagacgac
gaatacgcacgcgaactctgtggcatgtacatccagatggaaagaggtcttggagaaata
gacagagctcgtgccatattcatttactgcgcccagctctgcgatccggagaaacacgaa
cagttctggaaggactggcgcgagttcgaggtgctacacggaaacgaagagtgcttcaga
gaaatgctcaggatcaaacgcagcgtgcaagccaaatatagcaaggtgcacttcaacacc
gaagaaattgatgttgagcgagaccagccacggggaacctaa
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