Babesia bigemina: BBBOND_0404000
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Entry
BBBOND_0404000 CDS
T08062
Name
(RefSeq) hypothetical protein
KO
K06236
collagen type I alpha
Organism
bbig
Babesia bigemina
Pathway
bbig04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
BBBOND_0404000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bbig00536
]
BBBOND_0404000
Glycosaminoglycan binding proteins [BR:
bbig00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
BBBOND_0404000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VESA1_N
ApoC-I
Motif
Other DBs
NCBI-GeneID:
24566453
NCBI-ProteinID:
XP_012770098
UniProt:
A0A061DCN9
LinkDB
All DBs
Position
V:3389..8404
Genome browser
AA seq
1671 aa
AA seq
DB search
MSGHGIPLNNLKACFQFLEWFKGDTAMQGKVAVELATRMSPYYSTTTLGSQLPAPFSAFL
KNVSTFYNKLVTHASAGDYGSKSAKNVIDAIFECMPKLLAALYFLWYNVDYKFEAVGGGK
WRYLYVGWESTRRTWWGTYPASGGALQKYLRSLGSADIDVIPGGFGHDEVTCGYDYPNYG
YKFGENMISELEKILKKARGVQNDFRDTFLISVLSGAGTHQVNTANVLRLVRTFCQVVVD
DKYELDGGELKNALEKGLKPPKSCINWGELKEHCSKLYNKFNTFFKDDAFSYTGQAPSVT
SVNQSNFAIRTAQWFRDNLQTVRSNVKQISIHYPKDRSTWLTHLQPFANKYIFPCGFTFG
NTGYGTFGSAWETLPPKWRSVLEMLVSNDGGLAKLKQLLDGEPCSPAPRPPHPPPITSPQ
ASSSHVPSTSVDQGSGGQQKQVYHMVLTGRAGENARGAGPSVAASSHPRQVQSSQQPGPP
GVGRPSGPPGPQPSPVAKTPVSEPVSTQTDANANHNNGQSEIKSEIAPDAASSASALDGG
AKGDAAPAGPKGEPRAPGPNGPGSRGPTQNADTRASPAKPIDQRTRQVTQGTSLAPSLPS
IPEPTAHPGPAGDSDQSSPHSVPQSPQTVLSTNPKSTQPSNVQSPDSSSPGDRGTGSGRK
PADKAGSSVAGQTSDKGRQSGGDTDTTTSSAPDPGSNGGAAGVGSGGPKKEPGNPKKDLD
AERKKRWNAYGLEQQAKRTIDEEKMKSLIQSVNSNLHTIRQGVQEEALRKAVQENMLRKT
RIRQNADPNKVNASTCSNYSSMHIGRSICHTNSTMPMPTTTSSHYLTPDVLEKIKIAEEQ
ERTKQDEQRKRQETNDRHLRALHQGIEIETEILKQHAEQPTYPHADRLISEMNERNTKRD
ALGTVIPIHPGMEAVKLDGKATPSSKGIPRSTFPPISSNIDVPIGYSMKHKAPQWHDPPP
PSKPILQMFRAIPQGIVLNDNHQHRKSASGSRTTVEAPLLSQALEIDPSEIVLNVSGEAL
KNSTNDDTDLFPAPLTLDATPVPDHMQYKRSVDIYEPAVVKHDVPLTDILPKKRPPPVPA
VPKNPFHTRTPFYSELHKPPDSITLFPGDPPSVTQDDMACTPPWMLSQRGVSKPGRADEM
PHMPNDSHSRFLHTDVLPRTVREMLYWLAGLRHSAVYDTLEKYISDLVGNYAKQTKSLSS
DIETMELAAVPKCIVGNEVTQALRLSCQYSIIVLMGIQGFHDPHTAYKNDNYSKAPQYEY
STDPACLLCQLRDYVYACHHQLQFLKAQCKRGKSHGGWQDCKYGSDITASNSPLQAFLTD
GWDSTFETHLFDPCNLCLKSRIRMGFKRGDLPEKSENGITLSNILTPSCGGSDPLLTLSS
YLNCITRRTPRTTGELVSYFHHFGNSLHDAFDGRLLQLGTALFTPHADCPDWDHLGLPDL
EAVKGIGGHESLFTIQGSKHDHPRTLSTLVGCGSDSSNCPQHCSPITYRAYALYSQSFAH
TYLSWTVYLPERLRESLQKLHYDLQKHLGSGKCSSLHSCSTALPLLYTHGFTPPEVGSPP
PLQCSDVIAKLQDIVNGNPIATLMTSMDDFLYRVREPFIFTIVALWSLAFLIFANTMLYR
LDVLRIRSHLTRSSRSHVIDVKALLTDGTKMPSLYDIDYFDEDVLSQFVVQ
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcatggcattccactgaataacctcaaggcatgcttccagttcttggaatgg
ttcaaaggagacacagctatgcaaggcaaggtggccgtagagctggccacccgtatgagt
ccttattatagcactactaccctagggtcgcaattgcctgcccccttttccgcattcctc
aaaaacgtatcgacgttctataataaattagtcactcatgcaagtgcgggagattatgga
tctaagagcgcgaaaaatgtcattgatgcgatttttgagtgtatgcccaagttactagct
gcactgtatttcttatggtacaatgtggattataagttcgaagcagtgggaggagggaag
tggaggtacttgtatgttgggtgggagagtacgcggcgtacttggtggggtacatacccc
gcgtctggaggtgccctgcagaaatatctcagaagtttaggatcggctgatatcgacgtt
attcccgggggcttcggtcacgatgaagtaacatgcggttatgattatcctaactatgga
tataagtttggcgaaaatatgatttcagagcttgaaaagattttgaagaaggcgagaggt
gtgcaaaacgattttcgcgacacgttcttgatttcagtgttgtctggtgccggtactcac
caggttaacaccgcgaatgtgcttcgcttggtgagaacgttctgccaggttgtggttgac
gataaatatgaactcgatggcggtgagctgaaaaatgcattagaaaagggattaaaaccg
ccgaaaagttgtatcaattggggggaattgaaagaacattgttcaaagctgtataacaaa
tttaacactttttttaaggatgatgccttctcctacactggacaggcgccgtctgttaca
tcagttaaccagtcaaattttgcaatcagaacggcgcagtggttcagagataatttgcaa
acagtgcggagtaatgttaagcaaatcagtatacactacccaaaagatcgcagcacttgg
ttgacccatcttcagccatttgcaaacaaatacatattcccttgcggtttcacatttggc
aacacaggctacggaacgtttggaagcgcatgggaaactttgccacctaagtggaggagc
gtgcttgaaatgctcgttagtaatgatggcggtttggcaaagctcaaacaacttttagat
ggcgagccgtgttccccagctccgcgtcctccccatccccctcccataacctcaccccag
gcctccagttctcacgttccaagcacatccgtcgatcaaggttccggagggcaacaaaag
caggtgtatcatatggtcctgactggtagagcaggagaaaatgcaagaggcgcaggccca
tctgttgctgcaagcagtcatccccgtcaagttcaaagttctcaacagcccggtccaccc
ggagttgggagaccgtcagggcctcctgggccacaaccatcgcctgtcgctaaaactcca
gtttccgaacctgtctcaacccaaactgacgcaaatgcaaatcataataatggccagagt
gaaataaagtctgaaatagcaccggatgcagcgtcttccgcctcagcactagatggcggt
gctaaaggagatgcggccccggcaggacctaagggagaaccacgagcaccagggcctaat
ggtccagggagtcggggccccactcaaaatgcagacactcgagcttcaccagcaaaacca
attgatcagcgaacacgtcaagtcacacaagggacttcacttgcaccgtctttgcccagt
attcctgaacccactgcgcaccctggtccggcaggtgattcggatcaaagttcaccacac
agtgttcctcaaagtccacagactgtcttgtctacaaatcctaaatccactcagccttca
aatgttcaaagtccagactcttcgtcacctggtgatcgaggtaccggtagtggtcggaaa
ccggctgataaggcgggttcttctgtcgctggtcaaacaagtgataaaggtcggcagtca
ggtggagacactgatactactacgtcctctgccccagatcctggttctaatggcggtgca
gctggagtagggagtggtggaccaaagaaagagcctgggaatcctaaaaaggatctagat
gcagagcgtaaaaagcgttggaatgcttatgggctagaacaacaagcaaaacggacaatc
gatgaggaaaaaatgaaaagcctaatacaatcagtgaattcgaatctacatacaataagg
caaggtgtacaggaggaagcattacggaaagcagttcaagaaaatatgcttcgaaaaaca
agaattcgacagaacgctgatcctaataaggtgaatgctagtacgtgttctaattactcg
tctatgcacattggcaggtcaatctgtcatacaaattctacgatgccaatgccaaccaca
acatccagccactacctgacgcctgatgtgttggaaaaaattaaaatagcggaagaacaa
gagcgtacgaaacaggacgaacaacgcaaacgtcaggagaccaatgaccgacatcttcga
gcattgcaccagggaattgaaattgaaactgaaattctaaagcaacatgccgaacagcct
acgtacccccatgctgatcgactgatttctgagatgaatgaaaggaacacaaaacgcgat
gcactcggtacagttataccaattcatccgggtatggaggcagtgaaacttgatggaaag
gcaacgcctagctccaaaggaattcctagatctacgtttcctcccatatctagcaatatt
gacgtcccgattggctactccatgaaacataaggcgcctcagtggcacgatccgccgccg
ccaagcaaacctatacttcagatgttccgtgcaattcctcagggtattgtgttaaatgat
aatcatcagcatcgtaaaagcgcgtctggatcacgcacaactgtagaagctccgttactg
tctcaagcactcgaaattgatccttccgaaatagttttgaatgtcagtggtgaagcactg
aaaaacagcaccaatgatgataccgacttgttcccggcacccttgacactggatgcaacc
ccggtgcctgatcatatgcaatataagcgttccgttgacatatacgagcccgctgttgtt
aaacatgatgtgccactaacggacatcctaccaaaaaagcgcccgccgcccgtgccggcg
gtaccgaaaaacccttttcatacgcgcacgccgttttactcagagctccacaaacctcct
gactcaatcactctatttcccggcgaccctccatcggtcacccaagacgatatggcttgt
acaccaccttggatgttatcgcaaaggggtgtttcaaaacccgggcgcgctgatgagatg
ccacacatgccaaatgattcacattcacgttttctgcatactgacgttctgcccagaaca
gtgcgtgagatgctatactggctggcagggctccggcactccgcagtctacgacacattg
gaaaaatatatttcagatctggtagggaattatgccaaacaaacaaaatcattgtccagt
gatattgaaactatggagttggctgcggttccaaaatgcatagttggtaatgaagttact
caggccctgaggctcagctgtcagtacagtattattgtgcttatgggcattcaaggtttc
catgatccgcatactgcgtacaaaaatgacaattacagtaaagcgcctcaatatgaatat
tccaccgaccctgcctgcctcctctgccagctgcgtgactacgtctacgcctgccaccac
cagttgcagttcctgaaggcgcagtgtaagagaggcaagtcacatggtggttggcaagat
tgtaagtacggcagtgacatcactgcttccaactcccccctccaggcgttcctgactgac
ggctgggactccaccttcgagactcacctcttcgacccttgcaacctgtgcctcaagagc
cgcatcaggatgggattcaagagaggtgatttgcctgagaaatcggaaaatggcatcacc
ctttccaatatactcactcccagttgcggcggtagtgaccccctgctgacactgtcgtct
tacctcaactgcatcaccaggcggacgccgcgcaccaccggggagcttgtgtcgtacttc
caccattttggtaattcacttcatgatgcgtttgatggaagattgcttcaactgggcaca
gcactcttcactccacatgccgactgccccgactgggaccaccttggtctccccgacctt
gaagccgtcaaaggcatcgggggtcatgagtctctattcaccatacaaggctccaagcat
gaccatccccgcactctgtccacactggttggttgcggcagtgactcttccaactgccct
caacactgctcgcccatcacgtaccgggcctacgccctgtactcccagagcttcgcccac
acctaccttagctggactgtttacctgccggaaaggctgcgggagtcacttcaaaaattg
cactatgatttgcaaaaacatcttggcagcggcaagtgttcatcgctccactcatgttcc
actgccctgcccctcctctacactcacggcttcacgccgccggaggtgggatcgccgccg
ccactccaatgttcagatgttatcgccaagctgcaggacattgttaacggcaatcctatc
gcaaccctcatgacctccatggacgacttcctctacagagtccgggagccattcatcttc
actatcgtcgcactctggtctctcgcattcctcatcttcgccaacacaatgctgtaccgc
ttggacgtgctgcgcatacgatctcacctcacgcgctccagtaggtctcacgtcatcgat
gtcaaggcgttactcacggacggcacgaaaatgccctcgctctacgacatcgactacttt
gacgaagacgtacttagtcaatttgttgttcaataa
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