Bison bison bison (American bison): 104979871
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Entry
104979871 CDS
T08726
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03440
Homologous recombination
bbis03450
Non-homologous end-joining
bbis04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104979871 (RAD50)
03450 Non-homologous end-joining
104979871 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
104979871 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbis03032
]
104979871 (RAD50)
03400 DNA repair and recombination proteins [BR:
bbis03400
]
104979871 (RAD50)
DNA replication proteins [BR:
bbis03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
104979871 (RAD50)
DNA repair and recombination proteins [BR:
bbis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
104979871 (RAD50)
BRCA1-C complex
104979871 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
104979871 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
104979871
NCBI-ProteinID:
XP_010826724
Ensembl:
ENSBBBG00000006746
UniProt:
A0A6P3GIX3
LinkDB
All DBs
Position
Unknown
AA seq
1342 aa
AA seq
DB search
MSRIEKMSIQGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGEVVAVQRSMLCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSREI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALESRKKQMEKDNSELEQKMEKVFQGS
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHMQARDSLIQSLATQLELDGFELGPFSERQIKNFHRLVRERQEKEAETASQLLNDFVR
KEALKQKQIDEIRDKKTGLGRIIELKSEILTKKQNELKYVKYELQQLEGSSDRILELDQE
LTKAERELSKAEKNSNVETLKTEVISLQNEKADLDRTLRKLDQEMEQLNHHTATRTQMEM
LTKDKADKDEQIRKIKYRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINIELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRGFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGAIIP
EEESAKVCLTDVTIMERLQMELKDVERKIAQQAAKLQGLDLDRSVQQVNQEKQEKQYKLD
TVSSKIELNRKLIQDQQEQIQHLKSTANELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LHREIKVKAFIYICFLKLVQIYEMLFLGQWPKYGYCENQIKMVYRTCTNRKRLLGEDLLA
IIRKNCHRIAQDKINEIKEKVKNIHSYMKDIENYIQDGKDDYKKQKETELNKVIAQLSEC
DKHKEKINKEMGIMRQDIDTQKIQERWLQDNLTLRKRNEELKEVEEERKQHLKEMGQMQV
LQMKNEHQKLEEKIDNIKRNHSLAIGRQKGYEEEIIHFKKELREPQFRDAEEKYREMMII
MRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDAD
ENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILAL
DEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIK
KNIEQCSQIVTCSVSSLGSYVH
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattcagggcgtgcggagttttggaatagaggataaa
gataaacaaattatcactttcttcagtccccttacaattttggttggacccaatggggcg
gggaaaacgaccatcattgaatgtctaaaatatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcacgatcccaaggttgctcaagaaacagatgttagagcc
cagattcgtctacagtttcgtgatgtcaatggagaagttgtggctgtgcagagatctatg
ctttgtactcaaaaaagcaaaaagacagaatttaaaaccttggaaggagtcattactaga
acaaagcatggtgaaaaggtcagtctcagctccaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaaatctgtgctaaataatgtcattttctgtcaccaagaa
gaatctaattggcctttaagtgaaggaaaggctttgaagcaaaagtttgatgagattttt
tcagcaacaaggtacataaaagccttggaaacacttcggcaggtacggcagacacaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatatctgaagcaaaacaaagaaaaagct
tgtgagattcgtgatcagattactagtaaagaagcccagttaacatcctcgagggaaatt
gtcaaatcctatgagaatgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctctctaaaataatgagactcgacaatgaaattaaagctttggaaagccgaaagaag
caaatggaaaaagataatagtgaactggaacagaaaatggaaaaggtgtttcaagggtct
gatgagcaactaaatgatttatatcacaatcaccagagaacagtaagggagaaagaaagg
agattggtagactgtcagcgtgaactggaaaaattaaataaagaatctaggcttctcaat
caagaaaaatcagaactacttgtggaacagggccgtctacaactacaagcagatcgtcat
caggaacatatgcaagctagagattcattaattcagtctctggcaacacagctagaattg
gatggctttgagcttggaccattcagtgaaagacagataaaaaattttcacaggcttgtg
agagagaggcaggaaaaggaagcagaaactgccagccaactgttgaatgacttcgtaaga
aaagaggctctgaaacaaaaacaaatagatgagataagggataagaaaactggactggga
agaataattgaactaaagtcagaaatcctaactaagaagcagaatgagctgaaatatgtg
aagtacgaactacagcagttggaaggctcttcagacaggattcttgaactggaccaggag
ctcacaaaagctgaacgtgagctaagcaaggctgagaaaaacagcaatgtagaaactcta
aaaacagaagtaataagccttcaaaatgagaaagcagacctagacaggaccctgcgtaaa
ctggaccaggagatggagcaattaaaccatcatacagcaacacgtacccagatggagatg
ctcaccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatataggcatagt
gatgaattaacttcgttgttaggatattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagacttgccaagttgaacaaggaa
ctagcttcagctgagcaaaataaaaatcatataaatattgagctaaaaaggaaggaagag
cagttgtccagctatgaagacaaattgtttgatgtctgtggcagccaggattttgaaagt
gacttggacagacttaaagaagaaattgaaaaatcgtcaaaacaacgagccatgttggcc
ggagctacagcagtttattcccaattcattactcagctgacggatgaaaaccagtcgtgt
tgccctgtctgtcagagaggttttcagacagaagctgaattacaagaagtcatcagtgat
ttgcagtccaagctgaggcttgctccagataagctcaagtcgacagaatcagagttaaag
aaaaaagaaaagcggcgtgatgaaatgctgggactggtgcccatgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagaatgtgaacagagac
atacagcgcctcaagaatgacatagaagaacaggaaacactcttgggtgcaattatacca
gaggaagaaagtgctaaagtgtgtctgacagatgttacaattatggagaggctccagatg
gaactaaaagatgttgaaagaaaaattgcacagcaagcagctaaactccaaggactagat
ttggatcgaagtgttcagcaagtaaaccaggaaaaacaagaaaaacaatacaaattagat
acagtttctagtaagatagaattgaaccgtaagcttatacaggaccagcaggaacagatt
caacacctaaaaagcacagcaaatgaacttaaatcagagaaacttcagatatccactaat
ttacaacgtcgtcagcagctagaggaacagactgtggaattatccactgaagttcagtcc
ttacacagagaaataaaggtaaaagcattcatatatatttgttttttaaaattagttcag
atatatgaaatgctctttttgggacaatggccaaaatatggttattgtgagaatcaaatc
aaaatggtatacagaacttgtactaataggaaaagacttctgggagaagatttactggcc
ataataagaaagaactgccacagaatagcacaagataaaataaatgaaatcaaagagaag
gttaaaaatattcacagttacatgaaagacattgagaattatattcaagatggaaaagat
gactataagaagcaaaaagaaactgaacttaataaagtaatagctcaactaagtgaatgc
gataaacacaaagaaaagattaataaggaaatgggaatcatgagacaagatattgataca
cagaagatacaagaaaggtggctacaggataaccttactttaagaaaaagaaatgaagaa
ctaaaagaagttgaagaagaaagaaaacaacatttgaaggaaatgggtcaaatgcaggtt
ttacaaatgaaaaatgaacatcagaagttggaagaaaaaatagacaatataaaaagaaat
cacagtttggcaataggacgacagaaaggttatgaggaagaaattattcattttaagaaa
gaacttcgagaacctcaatttcgggatgctgaggaaaagtacagggaaatgatgattatt
atgagaacaacagagcttgtgaacaaggatctggacatctattataagacccttgaccaa
gcaataatgaaatttcacagtatgaaaatggaagaaatcaacaaaattattcgtgacctt
tggcgaagtacctatcgtggacaagatattgagtacatagaaattcgatcagatgccgat
gaaaatgtatcagcctctgataaaaggaggaattacaactaccgagtggtgatgctaaag
ggagacacagccttggatatgagagggcgttgcagcgccggacaaaaggtattagcctca
ctcatcattcgcctagccctggctgaaacattctgcttaaactgtggcatccttgctttg
gacgagccaacgacaaatcttgaccgagaaaacattgagtctcttgcacatgctctggtt
gagataataaaaagtcgctcacaacagcggaacttccagcttctggtaatcactcatgat
gaagattttgtggagctcctagggcgttctgaatatgtggagaaattctacaggattaag
aagaacattgagcagtgctcacagattgtgacatgcagtgttagttccctaggatcttat
gttcattaa
DBGET
integrated database retrieval system