KEGG   Bison bison bison (American bison): 104979871
Entry
104979871         CDS       T08726                                 
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
bbis  Bison bison bison (American bison)
Pathway
bbis03440  Homologous recombination
bbis03450  Non-homologous end-joining
bbis04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:bbis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    104979871 (RAD50)
   03450 Non-homologous end-joining
    104979871 (RAD50)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    104979871 (RAD50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bbis03032]
    104979871 (RAD50)
   03400 DNA repair and recombination proteins [BR:bbis03400]
    104979871 (RAD50)
DNA replication proteins [BR:bbis03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    104979871 (RAD50)
DNA repair and recombination proteins [BR:bbis03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     104979871 (RAD50)
    BRCA1-C complex
     104979871 (RAD50)
   NHEJ (non-homologous end-joining)
    MRX complex
     104979871 (RAD50)
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook AAA_21 SbcC_Walker_B SMC_N AAA_15 AAA_29
Other DBs
NCBI-GeneID: 104979871
NCBI-ProteinID: XP_010826724
Ensembl: ENSBBBG00000006746
UniProt: A0A6P3GIX3
LinkDB
Position
Unknown
AA seq 1342 aa
MSRIEKMSIQGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGEVVAVQRSMLCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSREI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALESRKKQMEKDNSELEQKMEKVFQGS
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHMQARDSLIQSLATQLELDGFELGPFSERQIKNFHRLVRERQEKEAETASQLLNDFVR
KEALKQKQIDEIRDKKTGLGRIIELKSEILTKKQNELKYVKYELQQLEGSSDRILELDQE
LTKAERELSKAEKNSNVETLKTEVISLQNEKADLDRTLRKLDQEMEQLNHHTATRTQMEM
LTKDKADKDEQIRKIKYRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINIELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRGFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGAIIP
EEESAKVCLTDVTIMERLQMELKDVERKIAQQAAKLQGLDLDRSVQQVNQEKQEKQYKLD
TVSSKIELNRKLIQDQQEQIQHLKSTANELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LHREIKVKAFIYICFLKLVQIYEMLFLGQWPKYGYCENQIKMVYRTCTNRKRLLGEDLLA
IIRKNCHRIAQDKINEIKEKVKNIHSYMKDIENYIQDGKDDYKKQKETELNKVIAQLSEC
DKHKEKINKEMGIMRQDIDTQKIQERWLQDNLTLRKRNEELKEVEEERKQHLKEMGQMQV
LQMKNEHQKLEEKIDNIKRNHSLAIGRQKGYEEEIIHFKKELREPQFRDAEEKYREMMII
MRTTELVNKDLDIYYKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDAD
ENVSASDKRRNYNYRVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILAL
DEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIK
KNIEQCSQIVTCSVSSLGSYVH
NT seq 4029 nt   +upstreamnt  +downstreamnt
atgtcccggatcgaaaagatgagcattcagggcgtgcggagttttggaatagaggataaa
gataaacaaattatcactttcttcagtccccttacaattttggttggacccaatggggcg
gggaaaacgaccatcattgaatgtctaaaatatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcacgatcccaaggttgctcaagaaacagatgttagagcc
cagattcgtctacagtttcgtgatgtcaatggagaagttgtggctgtgcagagatctatg
ctttgtactcaaaaaagcaaaaagacagaatttaaaaccttggaaggagtcattactaga
acaaagcatggtgaaaaggtcagtctcagctccaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaaatctgtgctaaataatgtcattttctgtcaccaagaa
gaatctaattggcctttaagtgaaggaaaggctttgaagcaaaagtttgatgagattttt
tcagcaacaaggtacataaaagccttggaaacacttcggcaggtacggcagacacaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatatctgaagcaaaacaaagaaaaagct
tgtgagattcgtgatcagattactagtaaagaagcccagttaacatcctcgagggaaatt
gtcaaatcctatgagaatgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctctctaaaataatgagactcgacaatgaaattaaagctttggaaagccgaaagaag
caaatggaaaaagataatagtgaactggaacagaaaatggaaaaggtgtttcaagggtct
gatgagcaactaaatgatttatatcacaatcaccagagaacagtaagggagaaagaaagg
agattggtagactgtcagcgtgaactggaaaaattaaataaagaatctaggcttctcaat
caagaaaaatcagaactacttgtggaacagggccgtctacaactacaagcagatcgtcat
caggaacatatgcaagctagagattcattaattcagtctctggcaacacagctagaattg
gatggctttgagcttggaccattcagtgaaagacagataaaaaattttcacaggcttgtg
agagagaggcaggaaaaggaagcagaaactgccagccaactgttgaatgacttcgtaaga
aaagaggctctgaaacaaaaacaaatagatgagataagggataagaaaactggactggga
agaataattgaactaaagtcagaaatcctaactaagaagcagaatgagctgaaatatgtg
aagtacgaactacagcagttggaaggctcttcagacaggattcttgaactggaccaggag
ctcacaaaagctgaacgtgagctaagcaaggctgagaaaaacagcaatgtagaaactcta
aaaacagaagtaataagccttcaaaatgagaaagcagacctagacaggaccctgcgtaaa
ctggaccaggagatggagcaattaaaccatcatacagcaacacgtacccagatggagatg
ctcaccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatataggcatagt
gatgaattaacttcgttgttaggatattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagacttgccaagttgaacaaggaa
ctagcttcagctgagcaaaataaaaatcatataaatattgagctaaaaaggaaggaagag
cagttgtccagctatgaagacaaattgtttgatgtctgtggcagccaggattttgaaagt
gacttggacagacttaaagaagaaattgaaaaatcgtcaaaacaacgagccatgttggcc
ggagctacagcagtttattcccaattcattactcagctgacggatgaaaaccagtcgtgt
tgccctgtctgtcagagaggttttcagacagaagctgaattacaagaagtcatcagtgat
ttgcagtccaagctgaggcttgctccagataagctcaagtcgacagaatcagagttaaag
aaaaaagaaaagcggcgtgatgaaatgctgggactggtgcccatgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagaatgtgaacagagac
atacagcgcctcaagaatgacatagaagaacaggaaacactcttgggtgcaattatacca
gaggaagaaagtgctaaagtgtgtctgacagatgttacaattatggagaggctccagatg
gaactaaaagatgttgaaagaaaaattgcacagcaagcagctaaactccaaggactagat
ttggatcgaagtgttcagcaagtaaaccaggaaaaacaagaaaaacaatacaaattagat
acagtttctagtaagatagaattgaaccgtaagcttatacaggaccagcaggaacagatt
caacacctaaaaagcacagcaaatgaacttaaatcagagaaacttcagatatccactaat
ttacaacgtcgtcagcagctagaggaacagactgtggaattatccactgaagttcagtcc
ttacacagagaaataaaggtaaaagcattcatatatatttgttttttaaaattagttcag
atatatgaaatgctctttttgggacaatggccaaaatatggttattgtgagaatcaaatc
aaaatggtatacagaacttgtactaataggaaaagacttctgggagaagatttactggcc
ataataagaaagaactgccacagaatagcacaagataaaataaatgaaatcaaagagaag
gttaaaaatattcacagttacatgaaagacattgagaattatattcaagatggaaaagat
gactataagaagcaaaaagaaactgaacttaataaagtaatagctcaactaagtgaatgc
gataaacacaaagaaaagattaataaggaaatgggaatcatgagacaagatattgataca
cagaagatacaagaaaggtggctacaggataaccttactttaagaaaaagaaatgaagaa
ctaaaagaagttgaagaagaaagaaaacaacatttgaaggaaatgggtcaaatgcaggtt
ttacaaatgaaaaatgaacatcagaagttggaagaaaaaatagacaatataaaaagaaat
cacagtttggcaataggacgacagaaaggttatgaggaagaaattattcattttaagaaa
gaacttcgagaacctcaatttcgggatgctgaggaaaagtacagggaaatgatgattatt
atgagaacaacagagcttgtgaacaaggatctggacatctattataagacccttgaccaa
gcaataatgaaatttcacagtatgaaaatggaagaaatcaacaaaattattcgtgacctt
tggcgaagtacctatcgtggacaagatattgagtacatagaaattcgatcagatgccgat
gaaaatgtatcagcctctgataaaaggaggaattacaactaccgagtggtgatgctaaag
ggagacacagccttggatatgagagggcgttgcagcgccggacaaaaggtattagcctca
ctcatcattcgcctagccctggctgaaacattctgcttaaactgtggcatccttgctttg
gacgagccaacgacaaatcttgaccgagaaaacattgagtctcttgcacatgctctggtt
gagataataaaaagtcgctcacaacagcggaacttccagcttctggtaatcactcatgat
gaagattttgtggagctcctagggcgttctgaatatgtggagaaattctacaggattaag
aagaacattgagcagtgctcacagattgtgacatgcagtgttagttccctaggatcttat
gttcattaa

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