Bison bison bison (American bison): 104979998
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Entry
104979998 CDS
T08726
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03030
DNA replication
bbis03410
Base excision repair
bbis03420
Nucleotide excision repair
bbis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104979998 (RFC5)
03410 Base excision repair
104979998 (RFC5)
03420 Nucleotide excision repair
104979998 (RFC5)
03430 Mismatch repair
104979998 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbis03032
]
104979998 (RFC5)
03036 Chromosome and associated proteins [BR:
bbis03036
]
104979998 (RFC5)
03400 DNA repair and recombination proteins [BR:
bbis03400
]
104979998 (RFC5)
DNA replication proteins [BR:
bbis03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104979998 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
104979998 (RFC5)
Chromosome and associated proteins [BR:
bbis03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104979998 (RFC5)
DNA repair and recombination proteins [BR:
bbis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104979998 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
104979998 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_16
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
AAA_14
DEAD
DUF815
ResIII
AAA_5
AAA_19
ATPase_2
AAA_30
PhoH
TIP49
nSTAND3
TniB
AAA_7
DNAX_ATPase_lid
Mg_chelatase
Thioredoxin_6
bpMoxR
NPHP3_N
AAA_25
AAA_3
AAA_28
Motif
Other DBs
NCBI-GeneID:
104979998
NCBI-ProteinID:
XP_010826839
Ensembl:
ENSBBBG00000014376
UniProt:
A0A6P3GJ81
LinkDB
All DBs
Position
Unknown
AA seq
339 aa
AA seq
DB search
METSAHKQQQPEAAKIRNLPWVEKYRPQTLDDLISHQDILSTIQKFISEDRLPHLLLYGP
PGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKL
VILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPEL
MVPRLEHVVEEEKVDISEDGMKALITLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGH
PLKSDIANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRVDFPSSVRIHL
LTKMADIEYRLAVGTSEKIQLSSLIAAFQVTRDLIVTEA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcagcgcacaagcagcagcagcctgaggcggccaagatcagaaacctgccc
tgggttgaaaaatatcggccacagacactggatgatctcatttctcatcaggacatcttg
agtactattcagaagtttatcagtgaggaccgcctgccgcacctccttctgtatggtcct
ccagggacaggaaagacatccaccatcctggcctgtgctaaacagctgtacaaagataag
gaatttggctccatggtcttggagctgaatgcttcagatgaccgaggaatagatatcgtt
cggggaccaatcctgagctttgctagcacaaggacaatatttaagaaaggctttaaactg
gtgatcttggatgaggccgatgccatgactcaggatgcccagaacgccctgaggagagtg
attgagaagtttactgaaaataccagattttgcctcatatgtaactatctgtcaaagatc
atccctgccttgcagtcccggtgtacaagattccgattcggaccactgactcccgaactc
atggttccccgcctggaacacgtcgtagaagaagagaaagttgatataagtgaagatggg
atgaaagcgctcataactctttccagtggagacatgcgaagggctctgaacatcttacag
agcaccaacatggcctttgggaaggtcacagaggagactgtctacacctgcacagggcac
ccgctcaagtcagacatcgccaacattctggactggatgttgaatcaagacttcaccacg
gcctacaggaatatcatggagttaaaaactctgaaggggttggcgttacacgacatcctg
acagagatacacctgttcgtgcacagagttgactttccatcttcagttcgaatacattta
ttgaccaaaatggcagacattgagtacagacttgctgttggcaccagtgagaagattcag
ctgagttccctcattgccgcttttcaagtcaccagagacctgattgtcactgaggcctag
DBGET
integrated database retrieval system
