Bison bison bison (American bison): 104980404
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Entry
104980404 CDS
T08726
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis04140
Autophagy - animal
bbis04148
Efferocytosis
bbis05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104980404 (VPS41)
04148 Efferocytosis
104980404 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104980404 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbis04131
]
104980404 (VPS41)
Membrane trafficking [BR:
bbis04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
104980404 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
zf_RING_Vps8_fungal
Beta-prop_HPS5
WD40_WDHD1_1st
Beta-prop_EML_2
Vps39_1
TPR_PEP5_VPS11
Beta-prop_RIG_2nd
zf-RING_5
zf_RING_Vps8
RIG-I_C
CofB_pilin_dom
zf-rbx1
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
104980404
NCBI-ProteinID:
XP_010827404
Ensembl:
ENSBBBG00000016003
UniProt:
A0A6P3GKU7
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MAEAEDQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHYGKVYLLDVQGNITQKFDVSPVKINQVSLDESGEHMGVCAEDGKVQVFGLYSGEEFH
ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMSRWKSSVLHEGEGNIRSVKWR
GHLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKI
CSVKERHANEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCA
RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVARGEYDIAARKCQK
ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI
REWPGDLYNNSVIVQAVRDHLKKDSQNRTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEFDRPNLLPFLRDSIHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDAELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGILVDEENICESCLSPILPSDAAKPFSMVVFHCRHMFHKECLPVPSMTSPAQFCNICSA
KHRGPGSAILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcagaggatcaggaaactggatctctggaagaatctacagatgagtctgag
gaagaagagagtgaagaggagcccaaactgaagtacgaaaggctctccaatggggtaact
gaaatccttcagaaggatgctgctagctgcatgacggtccatgacaagttcttggcactg
ggcacacattatggcaaggtttatttacttgatgtccaggggaacatcactcagaagttt
gatgtaagtcctgtgaagataaatcaggttagcctggatgaaagtggagaacacatgggc
gtgtgtgcagaggatggcaaggtgcaggtgtttggactgtattctggagaagaatttcat
gagacttttgactgtcccattaaaatcattgctgtgcacccgcattttgtgagatccagc
tgcaagcagtttgtgacgggagggaagaagttgctgctgtttgaacgatcttggatgagc
agatggaagtcttcagttctgcatgaaggggaagggaacataaggagtgtgaagtggagg
ggccatctgattgcctgggccaataatatgggcgtgaagatttttgacatcacctcaaag
cagagaatcacgaacgtgccccgggatgatataagtcttcgcccagatatgtatccctgt
agcctctgctggaaggacaatgtgacgctgatcattggctgggggacgtctgtcaagata
tgctccgtgaaggaacggcacgccaatgaaatgagggacttgccaagtcgatatgttgaa
atagtgtctcagtttgaaactgaattctacatcagtggactggcacctctctgtgatcag
cttgttgtactttcctacgtaaaggaggtttctgaaaaaacggaaagagaatactgcgcc
agacccagattggatatcatccagccactttcggagacttgtgaagagatttcttctgat
gctctcaccgtgaggggctttcaggaaaatgaatgtagagattatcacttagagtactca
gaaggcgagtcactcttttacatcgtgagtccaagggatgttgttgtagcgaaggaacga
gaccaagatgaccacatcgactggcttcttgaaaagaagaaatatgaagaagctttgatg
gcagctgaaattagccaaaagaacattaaaagacataagattctggacatcggcttggcg
tatataaaccacctggtggcaagaggagagtatgatatagcagcacgcaaatgccagaaa
attcttgggaaaaatgcagcactctgggaatacgaagtttataaatttaaagaaattgga
cagcttaaggcgattagtccttatttgccaagaggggatccagttctgaaaccactcatc
tatgaaatgatcttacatgaatttttggaaagtgattatgagggttttgccacgttgatc
cgagaatggccgggagatctgtacaacaattcagtaatagttcaagcggttcgggatcac
ctgaagaaagatagtcagaacaggaccttacttaaaaccctggcagaattgtacacctat
gacaaaaactatggcaatgctttggaaatatacctaacattaagacacaaggatgttttc
cagttgatccacaaacataatcttttcagttctatcaaggataaaattgttttattaatg
gattttgattctgagaaagctgttgacatgcttctggacaatgaagataaaatttcaatt
aaaaaagtagtggaagaattagaagacagaccagagttgcagcatgtgtatctgcataag
cttttcaaaagagaccaccataagggacagcgctaccatgagaagcagatcagcctttat
gctgaattcgaccgacccaacttgcttccatttctccgagacagtatccattgccccctt
gaaaaggctcttgagatctgtcaacagagaaactttgtagaagagacggtttatcttctc
agccgaatgggtaacagccgaagtgccctgaagatgatcatggaggaattgcatgatgtt
gataaagcaattgaatttgccaaggagcaggacgatgcagaactctgggaagatctgatt
ttatattccatcgacaaaccaccatttatcaccggcttgttaaacaacattggcactcat
gttgacccgattctactaattcaccgtattaaggaaggaatggagattcctaatttgaga
gactccttagttaaaattctacaagactacaatttacaaattctgcttcgtgaaggctgt
aagaagattctcgtagccgactcactgtccttactcaagaagatgcaccgaactcaaatg
aaaggcattctggttgatgaggagaacatctgtgagtcctgcctttcccctattcttcca
tcagacgcagcaaagcccttcagcatggtggtcttccactgccggcatatgttccacaag
gagtgcctgcccgtgcccagcatgacctctcctgcgcagttctgtaacatctgcagtgcg
aagcaccggggaccaggaagtgccattttggagatgaaaaaatag
DBGET
integrated database retrieval system
