KEGG   Bison bison bison (American bison): 104981270
Entry
104981270         CDS       T08726                                 
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
  KO
K16499  protocadherin delta 2
Organism
bbis  Bison bison bison (American bison)
Brite
KEGG Orthology (KO) [BR:bbis00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:bbis04515]
    104981270 (PCDH18)
Cell adhesion molecules [BR:bbis04515]
 Cadherins
  Protocadherins
   104981270 (PCDH18)
SSDB
Motif
Pfam: Cadherin Cadherin_2 BBS1 PAH Syndecan Cadherin_C_2 TMEM154 ATG31 MPS-4 DUF3418
Other DBs
NCBI-GeneID: 104981270
NCBI-ProteinID: XP_010828568
Ensembl: ENSBBBG00000012018
UniProt: A0A6P3GAC9
LinkDB
Position
Unknown
AA seq 1135 aa
MYQMNAKMHFTFVFALLVVSFNLDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLVKLPN
PSTVRFRAMQRGNTPLLVVNEDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAND
FFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSN
DNSPTFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKID
SERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLMS
PGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFAISENNSP
GAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQ
ITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEISIPKGAESGFHV
TRIRAIDRDSGVNAELSCSIVAGNEENIFVIDPRSCDIHTNVSMESVPYTEWELSVVIQD
KGNPQLHTKVLLKCVIFEYAESVTSTAMTSVSQAPLDVSMIIIISLGAICAVLLVIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHRSSPS
SSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQ
GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG
FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ
QHPHQSLEDDVQPVDSGEKKKSFSTFGKDSPSEEDSGDTSTSSLLSEMSSVFQRLLPASL
DTYSECTEMDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTNNSGPPLGTHSSVQ
PSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS
NT seq 3408 nt   +upstreamnt  +downstreamnt
atgtaccaaatgaatgctaaaatgcactttacgtttgtttttgcactcttggtggtgtct
ttcaacttggatgtgctgggcaagaatttgaaatacaggatttatgaggagcagagggtt
ggatcggtaattgcaagactatcagaggatgtggctgatgtgttagttaagctacctaat
ccttctactgttcgcttccgagccatgcaacggggaaatactcctctactcgtggtcaac
gaggataacggggaaatcagcataggagcaaaaatagaccgcgaacaactatgccagaaa
aacttgaactgttccatagagtttgatgtgatcactctgcccactgagcatctgcagctt
ttccatattgaagttgaagtgctggatattaatgacaattcgccccagttttcaagatct
ctcatacctattgagatttcagaaagcgcggcagtggggacccgtatccctctggacagt
gcatttgatccagatgttggggaaaattccctccacacgtactctctttctgccaatgat
ttttttaatatcgaggttcgaaccaggactgatggagcgaagtatgcagaactcatagtg
gtcagagagctggatcgggaactgaagtcaagctatgagcttcagctcaccgcctccgac
atgggggtgcctcagaggtctggctcatccatactaaaaatcagcatttcagactctaat
gacaacagccctacttttgagcagcagtcttatataatacaactcttagaaaactccccc
gttggcactctgctccttgatctgaatgccactgatccagatgagggcgctaatgggaaa
attgtctattccttcagcagtcatgtgtctcccaaaattatagagacttttaagattgat
tcagaaagaggacatttgactcttttcaagcaggtggattatgaaatcaccaaatcctat
gagattgatgttcaggctcaagatttgggtccaaattcaatcccagcacattgcaaaatt
ataattaaggttgtggatgttaatgacaataaacctgaaattagcataaacctcatgtcc
cctggaaaagaagaaatttcttatatttttgaaggggatcctattgatacatttgttgcc
ttggtcagggttcaggacaaggattctgggctgaacggagaaatagtttgtaagcttcat
ggacatggtcactttaaacttcagaagacttatgaaaacaattatttaatcttgacgaat
gccacgctggatagagaaaagagatctgaatacagtttgactgtaatcgctgaggacaag
gggacacccagtctctctacagtaaaacattttactgttcaaatcaatgatataaatgac
aatccaccccacttccagagaagtcgatatgaatttgcaatctcagagaataactcaccc
ggggcatatatcaccaccgttacagccacagatcctgatcttggagaaaatgggcaagtg
acatataccattttggagagttttatcctgggaagttccattactacatatgtcaccatt
gacccatctaatggagccatctacgccctcagaatctttgaccatgaggaggtgagtcag
atcacttttgtggtcgaagcaagagatggtggaagtccaaagcaacttgtaagcaatacc
acagtggtgctcaccatcattgatgaaaatgacaatgtccctgttgttatagggcctgca
ctgcgcaataacacagcagaaatctccatccccaaaggggctgaaagcggctttcatgtc
acaagaattagggcaattgacagagactctggcgtgaatgcagaactcagctgctccata
gtagcaggtaacgaggagaatatctttgtaattgatccacgatcatgtgacatccatacc
aacgtaagcatggaatctgttccctacacagaatgggagctctcagttgtcatccaggac
aaaggcaatcctcagctgcataccaaagtccttctgaagtgtgtgatctttgaatatgca
gagtcggtgacaagtacagcaatgacctcagtaagccaagcacccttggatgtctccatg
attataatcatttccttaggagcaatttgtgcagtattgttggttattatggtgctgttt
gcaactaggtgtaaccgagaaaaaaaagacactagatcctacaactgtagggtagcagaa
tcgacataccagcatcaccccaaaagaccctccaggcagatccacaaaggggacatcaca
ttggtgcctaccgttaatggcaccctgcccatcagatctcatcacaggtcatctccgtct
tcatctcctaccttagaaagagggcaaatgggcagccggcagagtcacaacagtcaccag
tccctcaacagtttggtgaccatctcatcaaaccacgtgccagagaatttctcattagaa
ctcacccatgccacccctgctgttgagcaggtctcccagcttctttcaatgcttcaccag
ggacaatatcagccaaggccaagttttagaggaaacaaatattccaggagctatagatat
gcccttcaagacatggacaaatttagcttgaaagacagtggccgtggtgacagtgaagca
ggagacagtgattatgatctggggcgagattctccaatagacaggctgctgggtgaagga
ttcagtgatctgtttcttacagatggaagaattccagcagctatgaggctgtgcacggaa
gagtgcagggtcctgggacactccgaccagtgctggatgccaccgctgccctcaccctcc
tcggattataggagcaacatgttcatccccggggaggaattcccagcgcagccccagcag
cagcatccgcatcagagtcttgaggatgacgtgcagcctgtagactctggtgagaagaag
aagagtttttccacgtttgggaaggactccccaagtgaggaggactctggggacaccagc
acttcctctttgctctcggagatgagcagcgtgttccagcgcctcttgcccgcttctctg
gacacctattctgagtgcactgagatggaccgatccaactcactggaacgccggaaggga
cctttgccagccaagactgtgggttacccacagggggtggcggcctgggcagccagtacg
cattttcaaaacccgaccaacaactctgggcccccacttggaactcactccagtgtgcag
ccttcttcaaaatggctgccggccatggaggagatccctgagaattatgaagaggatgat
tttgacaatgtgcttaaccacctcaatgacggcaaacatgaactcatggatgccagtgag
ctagtggctgagattaacaaactgcttcaggatgtccgccagagctag

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