Bison bison bison (American bison): 104983435
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Entry
104983435 CDS
T08726
Symbol
HCFC1
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1
KO
K14966
host cell factor 1
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03083
Polycomb repressive complex
bbis04980
Cobalamin transport and metabolism
bbis05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104983435 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
104983435 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104983435 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bbis01009
]
104983435 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbis03036
]
104983435 (HCFC1)
03029 Mitochondrial biogenesis [BR:
bbis03029
]
104983435 (HCFC1)
Protein phosphatases and associated proteins [BR:
bbis01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104983435 (HCFC1)
Chromosome and associated proteins [BR:
bbis03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
104983435 (HCFC1)
HMT complexes
COMPASS/SET1 complex
104983435 (HCFC1)
MLL-HCF complex
104983435 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
104983435 (HCFC1)
Mitochondrial biogenesis [BR:
bbis03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
104983435 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
104983435
NCBI-ProteinID:
XP_010831178
UniProt:
A0A6P3GHT3
LinkDB
All DBs
Position
Unknown
AA seq
1333 aa
AA seq
DB search
LQPGWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELHVYNTATNQWFIPAV
RGDIPEYGKYSNDLYELQASRWEWKRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLA
NDSEDPKNNIPRYLNDLYILELRPGSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKS
KLVIYGGMSGCRLGDLWTLDIGTTWVWLLLWSRSAAGLLGSRMYVFGGWVPLVMDDVKVA
THEKEWKCTNTLACLNLDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYR
KAWNNQVCCKDLWYLETEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPA
TAATATSPTPQPVPSVPANPPKSPAPAAAAPAVQPLTQVGITLLPQAAAAPPTTTTIQVL
PTVPGSSISVPAAARTQGEPGARGSGVSRAAPGFPQSQEVLLQEAGIGAASGLVLPVGSS
SLCPLQVIGRSPQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTL
PATVKVASSPVMVSVPRGWFRAHSLGAGGFWAPSLANTSTRPIITVHKSGTVTVAQQAQV
VTTVVGGVTKTITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQI
IQTKGPLPAGTILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTII
KTIPMSAIITQAGATGVTSSAGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQG
VTQVRCAWPCLPXGSSLGPXXXXXXXXXXXGVTTLGTVTGTVSTSLAGAGGHSTSASLAT
PITTLGTIATLSSQVINPTAITVSAAQTTLTAAAGLTTPTITMQVGQSELQCAAGPLVSL
PHVEPVGWLPWRCIIAIFSHCLLVCRVEIMYLSHAAPSHRTLESSLEVAVPPAVAPQAGA
SLLTPFPTQRVCSNPPCETHETGTTHTATTVTSNMSSNQDPPPPAGDQGEVESTQGDSVN
IASSSPITTTVSSTLTRAVTTVTQSTPVPGPSVPKISSVTETAPGALTTEVPIPATITVT
IANTETSDMPFLDQLSLPQELMAEAQAGTTTLMVTGLTPEELAVTAAAEAAAQAAATEEA
QALAIQAVLQAAQQAVMGTGEPMDTSEAAAAVTQAELSHLSAEGQEGQATTIPIVLTQQE
LAALVQQQQLQEAQAQQQQHHLPTEALAPADSLNDPTIESNCLNELAGAVPSTVSLLPPT
ATESTWGPAWPWEGWPAASLPWGSQLKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQS
AQAGGETKSSTPA
NT seq
4001 nt
NT seq
+upstream
nt +downstream
nt
ttgcagcccggctggaagcgagtggtgggctggtcgggtccagtgccccggccccgccac
ggccaccgcgccgtggccatcaaggagctcatcgtggtgtttggcggcggcaacgagggg
atagtggacgagctgcacgtgtacaacacggcgaccaaccagtggttcatcccagctgtg
agaggggacatccctgaatacgggaagtacagcaacgacctctacgagctccaggcaagc
cggtgggaatggaagagactgaaagcaaagacgcccaaaaatgggccacctccgtgtcct
cggcttgggcacagcttctcccttgtgggcaacaagtgttacctgtttgggggtctggcc
aatgatagcgaggaccccaagaataacattccgaggtacctgaatgacttatacatcctg
gaactgcggccgggctctggagtggtagcctgggacattcccatcacttacggtgtcctg
cccccaccccgagagtctcacactgcagtggtctacactgagaaagacaacaagaagtcc
aaactggtgatctatggagggatgagtggctgcaggctgggggacctctggaccttggat
atcggtacgacgtgggtgtggctgctcctgtggtctaggagtgcagctggtctgctgggc
agcagaatgtacgtgtttggtggctgggtgcctctcgtcatggatgacgtcaaagtggcc
acacacgagaaggagtggaagtgtaccaacactctggcttgtctcaacctggataccatg
gcttgggagaccatcctgatggatacgctggaagacaatattccccgggcccgtgctggc
cactgtgcggtagccatcaatacccgcctttacatttggagtgggcgtgacggctaccga
aaggcctggaataaccaggtctgctgcaaggacctctggtacctggaaacggagaagccg
ccacctccagcccgggtacagctggtgcgagccaacactaactccctggaggtgagctgg
ggggccgtggcaacagccgacagttaccttctgcagctccagaaatatgacattcctgcc
acggctgccactgccacctcccccacaccccaaccagtcccgtctgtgcctgccaatcct
cccaagagccctgccccagcagcagccgcacctgccgtgcagccgctgacccaagtaggc
atcacgctcctgccccaggctgctgccgcgcccccgaccaccaccaccatccaggtcttg
ccgacggtgcctggcagctcaatctccgtgcccgccgcagccaggactcaaggtgagccg
ggcgcccgagggtctggggtcagtagagcagcgcctggctttcctcaaagccaagaggtg
ctgctccaggaagcagggattggggctgcctcgggtctggtgctccctgtgggctcaagc
tccttgtgtcccttgcaggtcattggcaggagcccgcagatgagtggcatggctgcattg
gcagccgcggctgctgccacccagaagatccctccttcctcggcacccacggtcctgagt
gtcccggctggcaccactatcgtcaaaaccgtggccgtgacgccgggcaccaccacgctc
ccagccactgtgaaggtggcctcctcgccagtcatggtgagcgtccctcggggctggttc
agagcccacagccttggggccgggggcttctgggcaccgtcattagccaacacatctacc
cgtcccatcatcaccgtacacaagtccggaaccgtgacagtggcccagcaagcccaggtg
gtgaccacagtggtgggtggggttaccaagaccatcaccctggtgaagagccccatctcg
gtcccaggaggcagtgctctgatttccaatctgggcaaagtaatgtcagtggtccagacc
aaaccggttcagacttcggcagtcacaggccaggcatctacaggcccggtgactcagatc
atccagaccaaaggacccttgccagccgggaccatcctgaagctggtgacgtctgcagat
ggcaagcccactaccatcatcacaaccacacaggccagcggggcagggactaagcctacc
atcctgggcatcagcagtgtgtcccccagcaccaccaagcccggcaccaccactatcatt
aagaccatccccatgtcggccatcatcacacaggcgggcgccacgggcgtgactagcagt
gccggcatcaagtcacccatcaccattatcaccaccaaggtgatgacttctggaactgga
gcccccgccaaaatcatcacggctgttcccaaaattgctacgggtcacgggcagcaagga
gtgacccaggtgaggtgtgcctggccctgtcttccctgagggtccagcctgggaccnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnncaggcgtcacgaccctgggcacggtgacaggc
accgtctccaccagcctggccggagccgggggccatagcaccagcgcctcactggccaca
cccatcaccacgttgggcaccatcgccaccctctcaagccaggtgatcaaccccactgcc
atcactgtgtctgcggcgcagacgacgctgacagcggccgctgggctcaccacacccacc
ataaccatgcaggtagggcagtcggagctgcagtgtgccgccgggcccttggtttccctc
ccacatgtggaacccgtaggatggttaccctggaggtgcataatcgcgatttttagtcac
tgcctgctagtctgtcgggttgagataatgtatctcagccatgccgccccctcccacagg
accctggagtccagcctggaggtggcagtgccacccgcagtcgcccctcaggccggtgct
tcgttgctcactcctttcccgacgcaaagggtgtgctccaacccgccctgtgagacgcat
gagacaggcactacgcacacggccaccactgtcacctccaacatgagttccaaccaagac
cccccaccgcctgccggcgaccagggagaggtggagagcacccagggcgacagtgtgaat
atcgccagttccagtcccatcacgacaacagtgtcctccacgctgacgcgggccgtgacc
actgtgacacagtccacgccagtcccaggcccttcggtgccgaagatctcatctgtgact
gagactgccccaggggctctgaccaccgaagtccccatcccggccacgattacagtgacc
atagccaacacagaaacttctgacatgcccttcttagaccagttgtccctcccccaagag
ctgatggccgaagcccaggcgggcaccaccaccctcatggtgacagggctcaccccagag
gagctggcagtgactgctgctgctgaagcggccgcgcaggctgcagccacagaggaggcc
caggccctggccatacaggccgtgctccaggccgcacagcaggctgtcatgggcaccggg
gagcccatggatacttcagaggcggccgcagcggtgacacaggcagagttgagccacctg
tcggccgagggccaggaaggccaggcgaccactatccccatcgtgctgacgcagcaggag
ctggctgccctggtccagcagcagcagctccaggaagcacaggcccagcagcagcagcac
cacctgcccacggaagcactggccccggctgacagcctcaatgacccgaccatcgagagc
aactgcctcaatgagctggccggggctgtgcccagcaccgtgagcctgctgccccccacg
gccactgagagtacgtggggccctgcctggccatgggagggttggcctgcagcctcgctc
ccctggggaagtcagttgaaaatcagcaaaagtccagacggtgctcacctcacctgggag
ccaccctctgtgacctccggcaagatcatcgagtactcagtgtacctggccatccagagc
gcgcaggccggtggtgagaccaagagctcgaccccggcgca
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integrated database retrieval system
