Bison bison bison (American bison): 104984022
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Entry
104984022 CDS
T08726
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104984022 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbis03019
]
104984022 (CLP1)
Enzymes [BR:
bbis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
104984022 (CLP1)
Messenger RNA biogenesis [BR:
bbis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
104984022 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
ATP_bind_1
TniB
MMR_HSR1
AAA_22
AAA_16
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
104984022
NCBI-ProteinID:
XP_010831905
Ensembl:
ENSBBBG00000003667
UniProt:
A0A6P3GZX4
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggaggccaatgatgacaagaagccaacaactaaatttgaactggagcgggag
acagagcttcgctttgaggtggaggcgtcgcagtcagttcagttggagctgctggctggc
atggcagaaatcttcggcacagagctgacccgaaacaagaagttcacctttgatgccggc
gccaaggtggctgtcttcacttggcacggctgttcgctgcagctcagtggccgcaccgag
gtggcttacgtctccaaggataccccgatgttgctttatctcaacacgcatacggccttg
gagcagatgcggaggcaggcagagaaggaggaggagcgaggcccccgggtgatggtcgtg
ggccccacggacgtgggcaagtccaccgtgtgccgtctgctgctcaactacgcggtgcgt
ttgggccgccggcccacgtacgtggagctggatgtgggccagggctctgtgtccatcccc
ggcaccatgggggccctgtacattgagcggccagcagacgttgaggaggggttctccatc
caggccccgctggtgtaccacttcggctccaccacgcctggcaccaacatcaagctttat
aataagattacatctcgtttagccgatgtgttcaaccagaggtgtgaagtgaaccgcagg
gcctcggtgagcggctgtgtcattaacacctgtggctgggtcaagggctctggttaccag
gctctggtccatgcagcctcagcctttgaggtggatgtcgttgtggttctggatcaagaa
cggctgtacaacgaactgaaacgggacctgcctcacttcgtccgcacggtgctgctcccc
aagtcggggggtgtggtggagcgctccaaggacttccggcgggaatgccgggatgagcgc
atccgtgagtatttctatgggtttcggggctgtttctatccccatgccttcaacgtcaaa
ttttcagatgtgaaaatctacaaagtcggggcacccaccatcccagactcttgcctgcct
ctgggcatgtctcaggaagacaatcagctcaagctggtgcctgtcacccccggccgagat
atggtgcaccacctgctgagcgtcagcacggcggagggcacggaggagaacctctccgag
accagcgtggcgggcttcatcgtggtgaccagtgtggacctggagcaccaggtgttcacc
gttctctctccggccccccgcccgctgcccaagaacttccttctcatcatggatatccgg
ttcatggatcttaagtag
DBGET
integrated database retrieval system
