KEGG   Bison bison bison (American bison): 104985316
Entry
104985316         CDS       T08726                                 
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
  KO
K12879  THO complex subunit 2
Organism
bbis  Bison bison bison (American bison)
Pathway
bbis03013  Nucleocytoplasmic transport
bbis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bbis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104985316 (THOC2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    104985316 (THOC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbis03019]
    104985316 (THOC2)
   03041 Spliceosome [BR:bbis03041]
    104985316 (THOC2)
Messenger RNA biogenesis [BR:bbis03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     104985316 (THOC2)
Spliceosome [BR:bbis03041]
 Complex C
  Other components
   EJC/TREX
    104985316 (THOC2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104985316 (THOC2)
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 104985316
NCBI-ProteinID: XP_010833722
UniProt: A0A6P3H3W2
LinkDB
Position
Unknown
AA seq 1563 aa
MAAVTVVVPVEWIKNWEKSGRGEFLHLCRILSENKSLDGSTYRDFQQALYELSYHVIKGN
LKHEQASNVLSDISEFREDMPSILADVFCILDIETNCLEEKSKGDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEQDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSDKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQSIMDQTPPYYAASHKLIALAICKLIHITIEPLYRKVGIPKGAKGSPVSALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGRKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLIAPVVDS
LKYLTSLNYDILAYCIIEALANPEKEKMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHALALPLCLLMAQQRNGIIFQESGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKQVPSIDVLCNEFHTPHDAAFFLSRPKYAHRILSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHAAVVSLHVSKVWDDISPQFYATFWSLTMYDLAAPHTSYE
REVNKLKIQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVSSCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYMHIRNILIVLTKILPWYPKILNL
GQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAVASV
QNGPGAGPSSSSIGSVSKLDESSAEDTDKSRERSQCGVKAVNKASSATPKGNSNNGNSGS
NSSKTVKENDKEKGKEKEKEKKEKTPTTTPEARVLGKDGKEKPKEERPNKDEKAREMKER
TPKSDKEKEKSKKEEKAKDEKFKTTVPNVESKSTQEKEREKELSRERDTAKEMKSKENVK
GGEKTPVSGILRSPVPRSDIAEPEREQKRRKIDTHPSPSHSSTVKDSLIELKESSAKLYI
NHTPPPLSKREMDKKDLDKSRERSREREKKDEKDKKERKRDHLNNDREVPLDLTKRRKEE
NGTMGVSKHKSESSCESPYPNEKDKEKNKSKSSGKEKGGDSFKSGKMDKISSGGKKGVDR
SLS
NT seq 4692 nt   +upstreamnt  +downstreamnt
atggcggccgtaactgtggtggttcctgtagagtggataaagaactgggagaaatcaggg
agaggcgaatttttacatttatgccggatcctcagtgaaaataaaagcctcgatggttca
acttacagagatttccagcaagctctttatgaattatcataccatgtcattaaaggaaat
ctaaagcatgaacaggcatctaatgttcttagtgacattagtgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatatcgagacaaattgtttagaagaa
aaaagcaagggagactattttacacaattggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcttggatccagaaacattggaatcgttagggcttatcaaacaa
tcacagcaattcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa
aaatttaatttgttaagagaagaaaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattactagtgatttaatcttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttctggatgtcattttagaagtgtttgaatgc
aggccggaacaagatgacttctttatatctttattagaatcttacatgagtatgtgtgag
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttatcaggaaccaaatgga
gagactccttcatctttatacagagttgcagcagtacttctacaatttaaccttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaag
cgagaaattgtagaagctaagcagatcgttagaaaacttacaatggttgtattgtcttct
gataaaattgacgagcgagagaaagaaaaggaaaaagaagaggagaaagtggagaagcca
cctgacaaccaaaaacttggtttgttggaagccttgttaaagattggtgattggcagcat
gcgcagagcattatggatcagacgcctccatactatgcagcttcacataaactaatagcc
cttgctatttgcaagctgattcatataactattgagcctctctaccgaaaagttggcatt
cctaaaggtgctaaaggctcacctgttagtgctttgcaaaataagagagcgccaaaacaa
gcagagagctttgaagatttgaggagagacgtcttcaatatgttctgttaccttggtccc
cacctttctcacgatcccattttatttgctaaagtggtgcggataggcaagtcatttatg
aaggagtttcagtctgatggacgcaaacaagaagataaagagaaaacggaagttatcctt
agctgtttgcttagcattactgaccaggtattacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatgggggatgtttaaaacatttccatatcagcataga
tatcgtctgtatggccagtggaagaatgaaacttacaacagtcatccacttttagtaaaa
gttaaagctcaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat
gtgaagccttctggaagacaaattgggaagctgagccacagcaatccaaccattttgttt
gattatatcttgtcacaaatacagaagtatgataacttgatagcacctgtagtagattca
ttgaaatacctcacttcattgaattatgacatcttggcctattgtatcattgaagcttta
gctaatccagaaaaggagaaaatgaaacatgacgacacaaccatctcaagttggcttcag
agtctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggtctt
cttcagtatgtggctaatcagctaaaggcaggcaaaagttttgacctgcttatactgaaa
gaagtggtacaaaaaatggcaggaatagaaattacagaagaaatgacaatggagcaacta
gaagccatgactggtggagaacaactaaaagctgaaggtggttattttggccagataaga
aacactaaaaaatcctcccagagattaaaggatgcactattagaccatgctcttgctctt
cctctctgcttgcttatggctcagcagaggaatgggataatctttcaggaaagtggagag
aaacatttgaaacttgtgggaaaactctatgatcagtgtcatgataccctggtacagttt
ggtgggtttttagcatctaatctaagcacagaagattatataaagcaagtgccttcaatt
gatgtgctctgtaatgaatttcacacacctcacgatgcagcatttttcctgtctaggcca
aagtatgcacaccgtattttgtcaaagtatgacgaacttaaaaaatcagagaagggaagt
aaacagcagcataaagttcataagtacatcacatcatgtgaaatggtaatggctcctgtt
catgcagcagtggtttccttacacgtttccaaagtctgggatgacatcagtcctcaattc
tatgccacattctggtcattgacaatgtatgaccttgcagctccacataccagctatgaa
cgggaagtcaataaacttaaaatccagatgaaagcaattgatgataaccaggaaatgcct
ccaaataaaaagaaaaaagagaaggagcgatgtactgcccttcaggacaagcttctcgaa
gaagaaaagaaacagatggaacatgtacagcgagttctgcagagactgaaactggaaaag
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gaattggtacaccaacagaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgatataatttacacagtctcaagctgtactgaaaatgaagctagtcgatatggg
agattcctttgctgcatgttagagactgtgaccaggtggcacagtgatagagccacgtat
gaaaaggaatgtggaaattatccaggattccttactatattacgagcaactggatttgat
ggtggaaataaagctgatcaattagactatgaaaattttcgacacgttgtacataaatgg
cactacaaactgaccaaggcatcggtacattgccttgaaacaggcgaatatatgcacatc
aggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaaattttgaatctg
ggtcaagctttggaaagaagagtgcataaaatctgccaagaggaaaaagagaagaggcca
gatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatg
atacctgaaaatgagtttcatcacaaagacccccctccaaggaatgcagttgccagtgta
caaaatgggcctggtgctgggccttcttcatcgtcgatcggaagtgtatctaagttggac
gaaagcagtgccgaggacactgataaatcaagggagagatctcagtgtggtgtgaaagct
gttaataaagcttctagtgccacaccaaaagggaattcaaataatggaaatagtggttct
aacagcagcaaaactgttaaagaaaatgacaaagaaaaaggaaaagagaaagaaaaagag
aaaaaagaaaagactccaactactactccagaggcccgagtacttggtaaagatggtaaa
gaaaaaccaaaggaagaacggccaaataaagatgaaaaagcaagagagatgaaggaaaga
acacctaaatctgacaaagagaaagaaaaatccaagaaggaagaaaaagctaaagatgag
aaattcaagaccactgtcccaaatgtagaatcaaagtcaactcaagaaaaggaaagagag
aaggagctgtctagagaacgagatacagcaaaggaaatgaaatcaaaggaaaatgttaaa
ggaggagagaaaacaccagtttctgggatcttgaggtcacctgttccccgatcagatatt
gcagagcctgaaagggaacagaaacgtcgcaaaattgatacccatccttctccatcacat
tcctcaacagtaaaggacagtctcatcgaactcaaagagtcttcagcaaagctctacatt
aatcatactcctccaccactgtccaagagagaaatggacaagaaagatttggacaagtca
agggaaagatccagagaaagagaaaaaaaggatgaaaaggacaagaaagagcggaaaagg
gatcacttaaacaatgaccgagaagtgccactggacttaaccaagaggcggaaagaggaa
aatggaacaatgggggtttcaaaacacaaaagtgaaagttcatgtgagtctccttatcca
aatgagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaaggcggtgac
tcatttaaatctggaaagatggataaaatttcctctggtggcaaaaagggtgtggacaga
tccctaagctga

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