Bison bison bison (American bison): 104985316
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Entry
104985316 CDS
T08726
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03013
Nucleocytoplasmic transport
bbis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104985316 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
104985316 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbis03019
]
104985316 (THOC2)
03041 Spliceosome [BR:
bbis03041
]
104985316 (THOC2)
Messenger RNA biogenesis [BR:
bbis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104985316 (THOC2)
Spliceosome [BR:
bbis03041
]
Complex C
Other components
EJC/TREX
104985316 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104985316 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
104985316
NCBI-ProteinID:
XP_010833722
UniProt:
A0A6P3H3W2
LinkDB
All DBs
Position
Unknown
AA seq
1563 aa
AA seq
DB search
MAAVTVVVPVEWIKNWEKSGRGEFLHLCRILSENKSLDGSTYRDFQQALYELSYHVIKGN
LKHEQASNVLSDISEFREDMPSILADVFCILDIETNCLEEKSKGDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEQDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSDKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQSIMDQTPPYYAASHKLIALAICKLIHITIEPLYRKVGIPKGAKGSPVSALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGRKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLIAPVVDS
LKYLTSLNYDILAYCIIEALANPEKEKMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHALALPLCLLMAQQRNGIIFQESGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKQVPSIDVLCNEFHTPHDAAFFLSRPKYAHRILSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHAAVVSLHVSKVWDDISPQFYATFWSLTMYDLAAPHTSYE
REVNKLKIQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVSSCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYMHIRNILIVLTKILPWYPKILNL
GQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAVASV
QNGPGAGPSSSSIGSVSKLDESSAEDTDKSRERSQCGVKAVNKASSATPKGNSNNGNSGS
NSSKTVKENDKEKGKEKEKEKKEKTPTTTPEARVLGKDGKEKPKEERPNKDEKAREMKER
TPKSDKEKEKSKKEEKAKDEKFKTTVPNVESKSTQEKEREKELSRERDTAKEMKSKENVK
GGEKTPVSGILRSPVPRSDIAEPEREQKRRKIDTHPSPSHSSTVKDSLIELKESSAKLYI
NHTPPPLSKREMDKKDLDKSRERSREREKKDEKDKKERKRDHLNNDREVPLDLTKRRKEE
NGTMGVSKHKSESSCESPYPNEKDKEKNKSKSSGKEKGGDSFKSGKMDKISSGGKKGVDR
SLS
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtaactgtggtggttcctgtagagtggataaagaactgggagaaatcaggg
agaggcgaatttttacatttatgccggatcctcagtgaaaataaaagcctcgatggttca
acttacagagatttccagcaagctctttatgaattatcataccatgtcattaaaggaaat
ctaaagcatgaacaggcatctaatgttcttagtgacattagtgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatatcgagacaaattgtttagaagaa
aaaagcaagggagactattttacacaattggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcttggatccagaaacattggaatcgttagggcttatcaaacaa
tcacagcaattcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa
aaatttaatttgttaagagaagaaaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattactagtgatttaatcttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttctggatgtcattttagaagtgtttgaatgc
aggccggaacaagatgacttctttatatctttattagaatcttacatgagtatgtgtgag
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttatcaggaaccaaatgga
gagactccttcatctttatacagagttgcagcagtacttctacaatttaaccttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaag
cgagaaattgtagaagctaagcagatcgttagaaaacttacaatggttgtattgtcttct
gataaaattgacgagcgagagaaagaaaaggaaaaagaagaggagaaagtggagaagcca
cctgacaaccaaaaacttggtttgttggaagccttgttaaagattggtgattggcagcat
gcgcagagcattatggatcagacgcctccatactatgcagcttcacataaactaatagcc
cttgctatttgcaagctgattcatataactattgagcctctctaccgaaaagttggcatt
cctaaaggtgctaaaggctcacctgttagtgctttgcaaaataagagagcgccaaaacaa
gcagagagctttgaagatttgaggagagacgtcttcaatatgttctgttaccttggtccc
cacctttctcacgatcccattttatttgctaaagtggtgcggataggcaagtcatttatg
aaggagtttcagtctgatggacgcaaacaagaagataaagagaaaacggaagttatcctt
agctgtttgcttagcattactgaccaggtattacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatgggggatgtttaaaacatttccatatcagcataga
tatcgtctgtatggccagtggaagaatgaaacttacaacagtcatccacttttagtaaaa
gttaaagctcaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat
gtgaagccttctggaagacaaattgggaagctgagccacagcaatccaaccattttgttt
gattatatcttgtcacaaatacagaagtatgataacttgatagcacctgtagtagattca
ttgaaatacctcacttcattgaattatgacatcttggcctattgtatcattgaagcttta
gctaatccagaaaaggagaaaatgaaacatgacgacacaaccatctcaagttggcttcag
agtctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggtctt
cttcagtatgtggctaatcagctaaaggcaggcaaaagttttgacctgcttatactgaaa
gaagtggtacaaaaaatggcaggaatagaaattacagaagaaatgacaatggagcaacta
gaagccatgactggtggagaacaactaaaagctgaaggtggttattttggccagataaga
aacactaaaaaatcctcccagagattaaaggatgcactattagaccatgctcttgctctt
cctctctgcttgcttatggctcagcagaggaatgggataatctttcaggaaagtggagag
aaacatttgaaacttgtgggaaaactctatgatcagtgtcatgataccctggtacagttt
ggtgggtttttagcatctaatctaagcacagaagattatataaagcaagtgccttcaatt
gatgtgctctgtaatgaatttcacacacctcacgatgcagcatttttcctgtctaggcca
aagtatgcacaccgtattttgtcaaagtatgacgaacttaaaaaatcagagaagggaagt
aaacagcagcataaagttcataagtacatcacatcatgtgaaatggtaatggctcctgtt
catgcagcagtggtttccttacacgtttccaaagtctgggatgacatcagtcctcaattc
tatgccacattctggtcattgacaatgtatgaccttgcagctccacataccagctatgaa
cgggaagtcaataaacttaaaatccagatgaaagcaattgatgataaccaggaaatgcct
ccaaataaaaagaaaaaagagaaggagcgatgtactgcccttcaggacaagcttctcgaa
gaagaaaagaaacagatggaacatgtacagcgagttctgcagagactgaaactggaaaag
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gaattggtacaccaacagaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgatataatttacacagtctcaagctgtactgaaaatgaagctagtcgatatggg
agattcctttgctgcatgttagagactgtgaccaggtggcacagtgatagagccacgtat
gaaaaggaatgtggaaattatccaggattccttactatattacgagcaactggatttgat
ggtggaaataaagctgatcaattagactatgaaaattttcgacacgttgtacataaatgg
cactacaaactgaccaaggcatcggtacattgccttgaaacaggcgaatatatgcacatc
aggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaaattttgaatctg
ggtcaagctttggaaagaagagtgcataaaatctgccaagaggaaaaagagaagaggcca
gatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatg
atacctgaaaatgagtttcatcacaaagacccccctccaaggaatgcagttgccagtgta
caaaatgggcctggtgctgggccttcttcatcgtcgatcggaagtgtatctaagttggac
gaaagcagtgccgaggacactgataaatcaagggagagatctcagtgtggtgtgaaagct
gttaataaagcttctagtgccacaccaaaagggaattcaaataatggaaatagtggttct
aacagcagcaaaactgttaaagaaaatgacaaagaaaaaggaaaagagaaagaaaaagag
aaaaaagaaaagactccaactactactccagaggcccgagtacttggtaaagatggtaaa
gaaaaaccaaaggaagaacggccaaataaagatgaaaaagcaagagagatgaaggaaaga
acacctaaatctgacaaagagaaagaaaaatccaagaaggaagaaaaagctaaagatgag
aaattcaagaccactgtcccaaatgtagaatcaaagtcaactcaagaaaaggaaagagag
aaggagctgtctagagaacgagatacagcaaaggaaatgaaatcaaaggaaaatgttaaa
ggaggagagaaaacaccagtttctgggatcttgaggtcacctgttccccgatcagatatt
gcagagcctgaaagggaacagaaacgtcgcaaaattgatacccatccttctccatcacat
tcctcaacagtaaaggacagtctcatcgaactcaaagagtcttcagcaaagctctacatt
aatcatactcctccaccactgtccaagagagaaatggacaagaaagatttggacaagtca
agggaaagatccagagaaagagaaaaaaaggatgaaaaggacaagaaagagcggaaaagg
gatcacttaaacaatgaccgagaagtgccactggacttaaccaagaggcggaaagaggaa
aatggaacaatgggggtttcaaaacacaaaagtgaaagttcatgtgagtctccttatcca
aatgagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaaggcggtgac
tcatttaaatctggaaagatggataaaatttcctctggtggcaaaaagggtgtggacaga
tccctaagctga
DBGET
integrated database retrieval system