Bison bison bison (American bison): 104985412
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Entry
104985412 CDS
T08726
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
bbis
Bison bison bison (American bison)
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bbis04040
]
104985412 (SCN11A)
Ion channels [BR:
bbis04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104985412 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
104985412
NCBI-ProteinID:
XP_010833872
Ensembl:
ENSBBBG00000020919
UniProt:
A0A6P3H4A1
LinkDB
All DBs
Position
Unknown
AA seq
1858 aa
AA seq
DB search
MNAQVFTPCGTSLPAFIAFSALQRAWIFSLHTISLLDSQLNLFSELGLSLKARQELGAAP
PRRASTVRSRSLDSVRDLLCGELQEVPRELLPGAALPGGRVKMDDRCYPVIFPDGRNFRP
FTPDSLAAIKKRIAIQKEKNKSKDRKAAEREPRPQLDLKVSRKLPKLYGDIPRDLIAKPL
EDLDPFYHNHKTFMVLNKKRTIYRFSAKRALFILGPFNSIRSLAIRISVHSLFSMFIICT
VIINCVFMALAHQKSSIDVKTDHAEYVFLGIYLFEALVKILARGFILDEFSFLRDPWNWL
DSIVIATAFVSYSPYINDSSFSLSSLRTFRVFRALKAISVISGLKVIVGALLHSVKKLVD
VMILALFCLSIFALVGQQLFMGNLTYKCVSNSCKHHYQDYYQDYCFKKEESTEFKMCGMW
MGNRACPEQYECRDSHKNPDYNYTTVRTSGLISVLFFVVVIFLGSFYLVNLTLAVVTMTY
EEQNKNVAAETEAKEKMFQEAQQLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGS
KKRKSFFLRKSGKDQIPGSDSDEDSSKKPHLLEQTKRLSQNLSVDHCDEHGDSFQRQRAL
SAVSILTITMQEQEKSQEPCLPCGENLASRYLVWDCSPWWLDIKKVLRTVMTDPFTELAI
TICIIINTVFLAMEHYKMDQNFENILYTGNLVFTGIFMAEMCLKIIALDPYHYFRRGWNI
FDSVVALLSLTDVILNHIVSGKSWISFRSLRVLRVFKLAKSWPTLSTLIKIIGHSVGALG
NLTVVLAIVVFIFSVVGMQLFGSKFNNRKNNLKSCDPEVLCLRRWHMGDFYHSFLVVFRI
LCGEWIENMWECMQEANPTLCVIVFLSIMVIGKLVVLNLFIALLLNSFSNEERNGHLEGK
VKKTKIQIALDRFRRAFCFVIHTLEHFFRKHCRKRHLSKQKEVTEDPGGKIKDIIPLVTG
MRKGPEIWEEFGILTSVPMALHDRTWLAPLAEEEDDAEPPGEDKAQAVTQPEAGKQASEV
HQKSKGLTSPGIQSVEIDLFSGDDPPMSIQNLRKKSDAASVLSECSTIGPQDPFMRVLEM
IPKKEPERCLPEGLNCCSLCHTVDKRKSSWITWWSLRKICYQIVKHSWFESFIIFVILLS
SGALVFEDINLDKQPKIQELLKCTDTIFTYIFILEMGLKWVAFGFRKYFTSVWCWLDFVI
VIVSVTSLIDLMGLKSFRILRALRPLRALSQFEGMKVVVYALIGAIPAILNVLLVCLIFW
LIFCILGVSLFSGRFGRCVNATDVKSVIDYNIVANRNQCESGHFYWDTPDVNFDNVLMAY
LALLQVATFKGWMDIMYAAVDSTEEGQQPQFEARSSMYLYFVVFIIFGSFFTLNLFTGVI
IDNFNQQQKKISGQDVFLTEEQKKYYNAMKKLGSKKPQRPIPRPQNKCQGFVFDLVTHQV
FDIIIIILILLNMLSMMAETHKQSETMKHLLECFNLAFVVIFAIECFIKIFALRQYYFAN
GWNLFDCVIVLLSIVSSVVSALKTEAQIPFPPTLFRMVRLVRIGRILRLVRAARRIRTLL
FALMMSLPSLFNIGLLLFLVMFIYAIFGMNSFRKVKEESGIDDIFNFQTFTSSMLCLFQI
TTTAGWDALLSPMLKSNKSCDPKTESCHLSTIAIIYFVTYIIISSLIVVNMYIAVILENF
NVATEESEDPLGEDDFEMFYEVWEKFDPEATQFIKYSALSDFADALPEPLRVAKPNKYQF
LVMDLPMVSGERLHCLDILFAFTTRVLGESSGLDSMKAAIEEKFMEANPFKKLYEPIVTT
TKRNEEERCAAAVIQKAFRKYMLKTRCTLKDRPHSTLQTLSNGDLPSSGVAEGKVHYD
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacaggtctttactccttgtggaacctctcttccagctttcattgccttctct
gccctacagagagcgtggattttttccctgcacaccatttccctcctggattcacagctt
aacctcttcagtgagcttgggctttcactaaaggcaagacaagagcttggagccgcccct
cccagaagggcttcaactgtcaggagcagaagcttggactctgtgagagacttgctctgt
ggagagcttcaagaggtgccacgggagctgctgcctggagctgccttaccaggaggaagg
gtgaagatggatgacaggtgctacccagtgatctttccagatgggaggaatttccgcccc
ttcactcctgactctttggctgcaatcaagaagcggatcgccatccaaaaggagaaaaat
aagtccaaagatcggaaagcagcagaacgcgagcctcgacctcaacttgacctaaaggtc
tccagaaagttgcccaagctttatggtgacattccccgtgacctgatagcaaagccccta
gaagacctggacccattctaccacaatcataagacatttatggtgttgaacaaaaagaga
acaatctaccgcttcagcgccaaacgtgccttgttcattttggggcctttcaattcaatc
agaagtttggccattagaatctcagtccattcgttgttcagcatgttcatcatctgtact
gtcatcatcaactgcgtgttcatggccttggctcatcagaagagcagcattgatgtgaaa
actgaccatgctgagtatgtcttccttgggatttatttatttgaagcattagttaaaata
ttggcaagaggttttattctggatgagttttctttcctgcgagatccgtggaactggctg
gactccattgtcattgcaacagcatttgtatcatattctccatatatcaatgacagcagc
ttcagtctgtcatccctgcgtaccttccgagtattcagagctttgaaagcaatttcagta
atttcaggtttgaaggtcattgttggggccttgctgcactctgtgaagaagcttgtcgat
gtgatgatcctggctctcttttgcctcagcatcttcgccctggtaggtcagcagctcttc
atgggaaatctgacgtacaaatgtgtcagtaattcctgtaaacatcactatcaagattac
tatcaagactattgctttaaaaaggaagagtccactgaattcaaaatgtgtggtatgtgg
atgggcaacagggcttgtcctgaacaatatgaatgcagagatagccacaaaaatcctgac
tataactacacaaccgtgcgtacctcagggctcatctcggtcctcttctttgtggtggtc
atcttcctgggctctttctacttggttaacttaaccctggctgttgtcaccatgacttat
gaggaacagaacaagaatgtagctgctgaaacagaagccaaggagaagatgtttcaggaa
gcccagcagctgttgaaggaggagaaggaggctctggttgccatgggaattgacagaagt
tcacttaattcccttgaagcatcatctttttccccaaagaagagaaagctatttggtagt
aagaaaagaaaatccttctttttaagaaagtctgggaaagaccagattccaggatcagat
tctgatgaagattcttcaaaaaagccacacctccttgagcaaaccaaacgactgtcccag
aatctgtcagtggaccactgtgatgagcacggagactccttccaaaggcagagagcgctg
agtgctgtcagcatccttactattaccatgcaggaacaagaaaaatcacaggagccttgc
ctcccatgtggggaaaatctggcatccagatacctcgtgtgggactgtagcccctggtgg
ctagacattaagaaggtcctgagaaccgtgatgactgatccttttactgaactggccatt
accatctgcatcataatcaacactgtcttcttggccatggagcattacaaaatggaccag
aattttgagaatatattgtacacagggaacttggttttcactggcattttcatggctgaa
atgtgcctaaaaatcattgcgctggatccctaccactactttcgtcgaggatggaacatt
tttgacagcgttgttgctcttctgagtttgacagatgtgatattaaaccatatagtttca
ggaaaaagttggatatcatttcgttccttaagagtgctgagggtcttcaagttagccaaa
tcctggccaactttaagcacactgattaagatcattggccattctgttggagcccttgga
aacctgactgtggtcttggccattgtggtctttattttctcagtagttggcatgcagctt
ttcggctctaaattcaataacagaaagaataatttaaagtcctgtgaccctgaagtcctg
tgtttacggcgctggcacatgggggatttctaccactcctttttggtggtgttccgcatc
ctctgtggcgaatggattgaaaacatgtgggaatgcatgcaagaagctaacccaacgctg
tgcgttattgtgtttctgtcgatcatggtgattggaaaacttgtggtactcaacctcttc
attgccttgctactcaattccttcagcaatgaggagagaaatggacacttggagggaaaa
gtcaagaaaaccaaaatccagatagccctggatcggttccgccgggctttttgttttgta
atacatactcttgagcattttttcaggaagcattgcaggaagcgacatttatcaaagcaa
aaagaggtgacagaagaccctggtggaaagatcaaagatatcattcccctggtcacaggg
atgagaaagggcccagagatctgggaggagtttggcatactaacttctgtaccaatggcc
ttgcatgatcggacttggttggccccacttgcagaggaagaagatgatgctgaaccccct
ggtgaagataaggcacaggctgtcacacaacctgaggctggaaaacaggccagcgaagtc
catcagaagagcaagggtctcactagtccaggaattcagagtgtggaaattgatctattc
tctggagatgatcctcctatgtcaatacagaatcttcggaagaagtctgatgctgcgagt
gtgctctcagaatgtagcaccattggtccacaggatccctttatgcgggtacttgaaatg
attcccaaaaaggaaccagagaggtgtttgcccgaaggcctgaattgctgctctctatgc
catactgtggacaagagaaagtcctcctggatcacttggtggagcctgcgaaaaatctgc
taccaaatagtgaaacacagctggtttgagagctttattatctttgtgattctgctgagc
agtggggcactggtatttgaagatattaaccttgataaacaacccaaaatccaagaatta
cttaaatgtactgacactattttcacatacatttttatcttggagatgggtctgaaatgg
gtggcctttggatttaggaaatatttcacaagtgtctggtgctggctcgacttcgtcatt
gtgattgtctctgtgacaagtctcatcgacttaatgggcttgaagtccttccggattctt
cgagcactgaggcccctgcgagcactgtcccagtttgaaggaatgaaggtggtagtttat
gctctcataggtgccatacctgctattctgaatgttttgcttgtctgcctcattttctgg
ctcatattttgtatcctgggagtaagtctgttttctggaagatttggaagatgtgttaat
gcaacagatgtaaaatcagttatagattataacattgttgcaaaccggaatcaatgtgaa
agtggacatttctattgggacaccccggatgtcaactttgacaacgtgttaatggcttac
cttgcactactgcaagtggcaacatttaagggctggatggatattatgtatgcagctgtt
gattccacagaggaaggacaacagccacagtttgaggcacgttcttccatgtacctttac
ttcgtagtttttatcatctttggctcattcttcactctgaatctctttactggtgttatt
attgacaacttcaaccaacagcagaaaaagataagtggccaagacgtctttctgacagaa
gaacagaagaaatactataatgcaatgaaaaaattaggatccaaaaaacctcaaaggccc
attccaaggcctcagaacaaatgccaaggctttgtgtttgacctcgtcacacaccaggtc
tttgacatcattatcatcatcctcattctcctcaacatgcttagcatgatggctgaaaca
cataagcagtcggagaccatgaaacatttacttgagtgtttcaacttggcctttgtggtc
atctttgcaattgagtgtttcatcaaaatctttgctttgaggcaatactacttcgccaat
ggctggaatttatttgattgtgtgatcgtgctcctttctattgttagttccgtggtttct
gccttgaaaaccgaggcccagattcctttccctccaacactgttcagaatggttcgcttg
gttcggattggccgaatcctgagacttgttcgagcagcacgaagaatcagaactctgctt
tttgctctgatgatgtccctgccctctctatttaatattggtcttctcctctttctggtt
atgtttatttatgccatttttggtatgaactcttttcgaaaagtgaaggaagagtctgga
atcgatgacatcttcaacttccaaacttttacaagcagcatgctctgcctcttccagata
accacgacagcaggttgggatgccctcctcagccccatgttgaaatcaaacaagtcctgt
gaccccaagacagagagctgccacctctctaccatagccataatctacttcgtcacttat
atcatcatttcctctctcattgtggtcaacatgtatattgctgtgattttagaaaacttc
aatgtagccactgaagaaagtgaagaccctttgggtgaagatgactttgaaatgttctac
gaagtctgggaaaagtttgacccagaagcaacacaatttatcaaatattctgccctttct
gactttgctgatgcccttcctgagcctctgcgtgtggcaaagccaaataaataccaattt
ttagtcatggacttgccaatggtgagtggagagcgtctccattgcttggatattctcttc
gctttcaccacgagggtacttggtgagtccagtggcctggatagcatgaaagcagcaata
gaagagaagttcatggaggccaaccctttcaagaagttatatgaacccatagtcaccacc
accaaaaggaatgaagaggaaagatgtgctgctgctgttattcaaaaggcctttcgaaag
tacatgctgaagaccaggtgtaccttgaaagacaggcctcattcaaccctccagacactc
tccaatggagacttacccagctctggggtggccgagggcaaggtccattatgactga
DBGET
integrated database retrieval system
