Bison bison bison (American bison): 104985817
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Entry
104985817 CDS
T08726
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104985817 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbis03019
]
104985817 (CPSF2)
Messenger RNA biogenesis [BR:
bbis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104985817 (CPSF2)
U7-dependent histone pre-mRNA processing factors
104985817 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
104985817
NCBI-ProteinID:
XP_010834498
Ensembl:
ENSBBBG00000009742
UniProt:
A0A6P3GXS4
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDFARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKVTEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattatcaaattaactaccctttctggggtccaagaagaatctgctctttgc
tatcttctccaagtcgacgagtttagatttttattggactgtggctgggatgagcacttt
tctatggatattatcgattccctgaggaagcacgttcaccagatcgatgcggtcttgctg
tctcatcccgaccctctccatctcggcgccctcccctatgctgttggaaagttgggtctg
aactgcgccatctatgcgaccattcccgtttataaaatgggacagatgttcatgtatgac
ctttatcagtcccgacacaatacagaagattttacactctttaccctagatgatgtggat
gcagcctttgataagatacaacagttaaaattctctcagattgtgaatttgaaaggcaaa
ggacatggcttgtctatcacacctctgccagctggtcatatgataggtggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtttatgcagttgacttcaaccacaagagg
gagatccacttaaatggatgttccctggaaatgctaagcagaccctccttacttatcaca
gactcatttaatgctacttatgtgcagcccaggagaaagcaaagagacgagcagcttctg
acaaatgtcctggaaacacttcgaggtgatggaaacgtattaatagccgtggacactgca
ggcagagttctggaacttgctcaactcctagatcagatttggagaactaaagacgctgga
ttgggtgtttactcgttggcgctcctcaataatgtcagctataatgtggtggagttctcc
aagtcccaggttgaatggatgagtgataagttgatgaggtgttttgaagacaaaagaaat
aatccatttcagtttcgtcatctctctctatgtcatggtctttctgactttgctcgagta
cctagccctaaagttgtacttgccagccaacctgacctggaatgtggattttcaagggat
ctctttattcagtggtgccaggaccctaaaaactcgatcattctgacttacagaactact
cctgggactttagcacgtttcctaattgataatccttctgaaaaagttacagaaatagag
ttgaggaaacgtgtgaaacttgaagggaaagaacttgaagaatacttggaaaaagagaaa
ctaaagaaagaagctgctaaaaagctcgagcagtcaaaagaggcggacatagattccagt
gatgagagtgacgctgaggaagacattgaccagccatcagcgcataagaccaagcatgac
ctgatgatgaaaggcgaaggcagtcgtaaaggaagtttcttcaaacaggctaaaaagtct
tatcctatgtttcctgccccagaagaaagaattaaatgggatgaatatggagaaatcatc
aaaccagaggatttcttagtgccagaacttcaagctactgaagaagaaaaaagcaaatta
gagtctggcctgacaaatggagacgaacccatggatcaggatttatctgatgttcctact
aagtgtatttctacaacagaatctattgaaataaaggccagggttacttacatagactat
gaaggacgctctgatggggattccattaaaaaaatcatcaatcagatgaaaccacgccag
ttaatcattgtccatggaccaccagaagccagtcaggatcttgcagagtgctgtcgtgca
tttggtgggaaggatattaaagtatacatgccaaagctgcatgagacagtcgatgccact
agtgaaactcacatctaccaggtgagattaaaagattcacttgtcagctcccttcagttt
tgtaaggcaaaagatgctgaactagcttggatagacggtgtcttagacatgagagtttcc
aaagtggacacaggagttattttagaagaaggcgaactaaaggatgatggagaagactct
gaaatgcaagtggatgcgccttcagattctagtgtcatagcacagcagaaggccatgaaa
agtctgttcggagacgatgagaaagaaacaggtgaagaaagtgagatcattcctactctg
gaacccttaccacctcatgaggttcctggacatcagtcggtttttatgaatgaaccaaga
ctgtcagacttcaaacaagttcttttacgggaggggatccaagctgaattcgtaggaggc
gtgctcgtttgcaacaatcaagtggcagtccgtagaacggaaactggacgcattggatta
gaaggctgcctttgtcaagacttttataggataagagaccttttatatgaacagtatgcc
attgtgtaa
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