Bison bison bison (American bison): 104986197
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Entry
104986197 CDS
T08726
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
104986197 (COL20A1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
Motif
Other DBs
NCBI-GeneID:
104986197
NCBI-ProteinID:
XP_010834952
Ensembl:
ENSBBBG00000017808
UniProt:
A0A6P3H6W0
LinkDB
All DBs
Position
Unknown
AA seq
1243 aa
AA seq
DB search
MSVRVRPHLGVGLCLYLSVTLGLSQGQASGRLRLAVLPEDRLQMKWRESEGSSLGYLVQV
KPRAGDPEQEVMLTTKTPKATVGGLSPSKGYTLQIFELTGSGNILLARREFVIEDLKSNS
MSRSSQRPLGATLEPTPSLVGSPDLEPPGALAPSQDPPTLGRPQFRCTPPMPVDMIFLVD
GSWSIGHSHFQQVKDFLASVIEPFEIGPGKVQVGLTQYSGAPQTEWDLNAFGTKEEVLNA
VHNLHYRGGNTFTGLALTHVLEQNLKPRAGLRPEAAKLVILVTDGKSQDDAPWANPSLNT
AAGVKNADETELRLLASQPLDITVHNVQDFPQLGTLSGLLSRLICQKVQGRSPRGSPATP
ALDPPPAPTRLVLTQVTSSSVLLSWSPAPQPPLKYLIVWRPSKGGTPREVVVEGPTSSAQ
LHNLTSSTEYLVSVFPLYKAGVGEGLQGLATTAPLPPPQALTXXXXXXKPVRLTWQPSAE
ATQYLVRWSPASPKGEEERREVRVGRPEVLLDGLAPGRDYDVWVQSLRGAEISEAQGIRA
RTPALTTPRHLSFSDVSHDSARVSWEGTARPVRLFRVSYISGKGGHSGQTEVPGNATSAI
LGPLSSSTTYMVRVTCLYPGGSSSTLTGRLTTRKVPSPSQLSVTELPGDEVRLEWAAAAV
SGVLVYQITWTPLGEGKAREISVPGNLGTAILPGLGRHSEYEITILAYYRDGARSDPVSL
RYTPVSRSPPSNLALASESPDSLRVSWTPPSSHVLHYRLSYALASGSGPEKSISIPGPGS
HVTIPDLLAATKYRVLVSAIYGAGESMAVSATGRTACPALHLDGSLPGFDLMAAFGLVEK
EYASIRGVAMEPSAFGPTRTFTLFKDSQLTRRASDIHLATLPPEHTVVFLLRLLPETPRE
AFALWQVASEDFQPILGVLLDAGRKSLTYFNRDPRATLQEVTFDLPEVRRIFFGSFHKVH
VAVGRARVRLYVDCRKVAERPIGEAGGLPAAGFVMLGRLAKARGPRSSSASFQLQVLQIV
CNDSWAEEDRCCELPASKEGESCPAFPSACACSSQTPGPPGPQGPPGLPGRNGAPGEQGF
PGPRGEPGPPGQMGPEGPGGQQGSPGTQGRTIQGPVGMRGLEGTAGLPGPPGPRGFQGTV
GARGSNGERGPPGAVGPTGLPGPKGERGEKGEPQSLATIYQLVGQASHVLKLHACTHEST
RPPMPILEAPRALGTSNKARLPGEGGHGGPHPGDRGRSPCCLK
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtccgcgtgcgccctcacctcggagtcggcctctgtctgtatctgagtgtcacc
ctggggctcagccagggacaagcgagtggccgcctgaggctggcggtgctgcctgaggac
cggctgcagatgaagtggagagagtcagaagggagcagcctcggctacctggtgcaggtg
aagcccagggcaggggacccagagcaggaggtgatgctgaccaccaagacccccaaggcc
actgtggggggcctgagcccctccaaggggtacaccttgcagatcttcgagctcactggc
tcagggaacatcctgctggctcgcagggagtttgtgatcgaggatctgaagagtaactcc
atgagcaggagcagccagaggccactgggggcaaccctggagcccaccccttcccttgtg
gggagcccagaccttgagcccccaggggccctggccccaagccaagatccacccacgctt
ggcagaccccagttccgctgcacaccccccatgcctgtggacatgatcttcctggtggat
gggtcctggagtataggccacagtcacttccagcaggtcaaagacttcctggccagcgtc
atcgagccctttgaaattgggccgggcaaagtccaagtaggtctgactcagtacagtgga
gccccccagaccgagtgggacctgaatgcctttggcaccaaggaggaggtgttgaatgct
gtgcacaacctccactacagaggaggaaacacattcacaggcctggccctgacccacgtg
ctggagcagaacctgaagcccagagcaggtctccgtccagaggcggccaagctggtgatt
ctggtgacagatggcaagtcccaggatgatgccccctgggctaacccttctctcaacact
gcggcaggcgtgaagaatgccgacgaaaccgagttgaggctcctggcatcccagccgctg
gacatcaccgtccacaatgtgcaggacttcccccagctcggcacactctccggcctactc
agccggctcatctgccagaaggtccagggcaggagcccgcgtgggagcccagctacaccg
gccctggatccccctccagctcctacaaggctggtcctgacccaagtgacctcctccagc
gtcctcttgtcctggagcccggccccacaaccgcctctcaagtacctgattgtgtggagg
ccttccaagggcggcacccccagggaggtggtggtggaagggcccacctcgtcagcacag
ctgcacaacctgacctccagcaccgagtacctggtctctgtgttccccctctacaaggct
ggcgtcggcgagggcctgcagggcctggcgaccacagcacccctgcccccaccccaggcg
ctgacnnnnnnnnnnnnnnnnnccaaacctgtccgcctcacctggcagccctcggcagag
gccacccagtacctggtgcggtggtcacctgcctcccccaagggcgaggaggagaggaga
gaggtgcgggtggggcggccggaggtgctgctggatggcctggccccgggcagggactat
gacgtgtgggtgcagagccttcgaggggcagagatcagtgaggcccagggcatccgtgcc
aggacccccgccctgaccacccccagacacctgagcttctcagacgtgagtcatgattca
gcccgcgtgtcctgggagggcaccgcaagacctgtgcgcctgttcagggtcagctacatc
tcgggcaagggaggccactcgggacagacggaggttcctgggaacgccacctcagccatc
ctggggcccctctcctcctctaccacctacatggtccgcgtcacctgtctctaccctggg
ggcagctcctctaccctgaccggccgcctgaccacacggaaagtccccagcccgagccag
ctgtcggtgacagaactgcctggggacgaagtccggctcgagtgggcggccgcggcggtg
tccggcgtgcttgtctaccagatcacgtggacgcccctgggagaggggaaggcccgtgag
atttctgtcccggggaacctgggcacggccatcctgcctggcctggggaggcactcagag
tatgagatcaccatcctggcctactaccgggacggggcccgcagtgaccctgtgtccctc
cgttacacccccgtcagccggagcccaccctccaacctggccttggcctcagagtcgcct
gacagcctgcgggtcagctggacgcccccgagcagtcacgtgctccactaccggctctcc
tacgcgctggcctcaggctccggacccgagaagtcgatctccattccaggacccggaagc
cacgtgacgatccctgacctgctggcggctaccaagtaccgggtcctggtctcagccatc
tatggagcaggggagagcatggcggtgtctgccacaggccggacggcctgcccggccctc
cacctggatggctccctcccaggctttgacctgatggcggccttcgggctggtggagaag
gaatatgcctccatccgcggcgtggccatggagccctcggcctttggccccaccaggacg
ttcacactcttcaaggactctcagctgacccggcgggccagcgacatccacctggccacc
ttgcccccggagcacacagtcgtcttcctcctgcgcctgctccctgagacgccccgagag
gcctttgcattgtggcaggtggcaagcgaggacttccagcccatcctcggggttctgctg
gacgccggcaggaagtcgctgacctacttcaaccgtgaccccagggccaccttgcaggag
gtcacctttgacctgcctgaagtgaggaggatattctttgggagtttccacaaggtgcat
gtggccgtgggccgcgccagggtcaggctctacgtggactgccggaaggtggccgagagg
cccatcggggaggccggcggcctgcctgctgccggcttcgtcatgctgggcaggttggcc
aaagcccggggcccccggagcagctctgcctcgttccagctccaggtgctacagatcgtg
tgcaatgactcgtgggcagaggaggacaggtgctgcgagctcccagcatcgaaggaggga
gagtcctgtcctgccttcccatctgcctgtgcatgttcctcacagacccctgggccccca
ggcccccaaggacctccgggcctccccgggcggaacggagccccaggagagcaaggcttc
ccagggcccaggggagagcctgggccacctggacagatgggacccgagggtcctgggggt
cagcaggggtcaccgggcacccagggccgcaccatccagggacccgtgggaatgagaggc
ctggaggggactgctggactgcctggccccccaggccctaggggcttccaaggtactgtg
ggggctaggggcagcaacggcgagcgaggacccccaggggccgtggggcccacaggactg
ccggggcccaagggggagcgaggagagaagggagagccacagtccctggccaccatctac
cagctcgtgggccaggcttcgcacgtgttgaagctccatgcctgcacccacgagagcacc
cggccccccatgcccatcttggaagcccccagggcccttggcacaagcaacaaggcccgg
ctccctggagaaggggggcatggtggcccccaccctggggacagaggacggtccccctgc
tgcctcaagtga
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