Bison bison bison (American bison): 104986349
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Entry
104986349 CDS
T08726
Symbol
PUM1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
104986349 (PUM1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
SAWADEE
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
104986349
NCBI-ProteinID:
XP_010835184
Ensembl:
ENSBBBG00000013598
UniProt:
A0A6P3H7S4
LinkDB
All DBs
Position
Unknown
AA seq
1186 aa
AA seq
DB search
MSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDADSDENDKGEKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPG
NCQNSANEVDLLGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGLA
PAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPPQYYGVTPWGVYPASLFQQQAAA
AAAATNSANQQTTPQAQQGQQQVLRGGASQRPLTPNQNQQGQQADPLVAAAAVNSALAFG
QGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAA
AAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPSNNLASSSFYGNNSLSSNSQSSSL
FSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRT
SSSLTPIGHSFYNGLSFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNG
SGRYISAAPGAEAKYRSASSASSLFSPSSTLFSSSRLRYGMSDVMPSGRSRLLEDFRNNR
YPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNY
VIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGH
VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD
QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN
VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIV
MHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcatgtgtcttgaagagaaaagcagtgctttggcaggactctttcagcccc
cacctgaaacatcaccctcaagaaccagctaatcccaacatgcctgttgttttgacatct
ggaacagggtcgcaagcgcagccacagccagctgcaaatcaggctcttgcagctgggaca
cactccagccctgtcccaggatccataggagttgcaggccgttcccaggacgacgctatg
gtggactacttctttcagaggcagcatggtgagcagcttgggggaggaggaagtggtgga
ggcggctataataatagcaaacatcgatggcctactggggataacattcatgcagaacat
caggtacgttctatggatgaactgaatcatgattttcaagcacttgctctggagggaaga
gcgatgggagagcagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaa
gatggaccaaaaggaatattcctgggtgatcaatggcgagacagtgcctggggaacatca
gatcattcagtttcccagccaatcatggtgcagagaagacctggtcagagtttccatgtg
aacagtgaggtcaattctgtactgtccccacggtcggagagtgggggactaggcgttagc
atggtggagtatgtattgagctcatccccgggcgattcctgtctaagaaaaggaggattt
ggcccaagggatgcagacagtgatgaaaacgacaaaggtgaaaagaagaacaagggtacg
tttgatggagataagctaggagatttgaaggaggagggtgatgtgatggacaagaccaat
ggtttaccagtgcagaatgggattgacgcagacgtcaaagattttagccgtacccctggt
aattgccagaactctgctaatgaagtggatcttctgggtccaaaccagaatggttctgag
ggtttagcccagctgaccagcaccaatggtgccaagcctgtggaggatttctccaacatg
gagtcccagagtgtccccttggaccccatggaacatgtgggcatggagcctcttcagttt
gattattcaggcacgcaggtacctgtggactcagcagcagcaactgtgggactttttgac
tacaattctcaacaacagctgttccaaagacccaatgcgcttgctgtccagcagttgaca
gccgctcagcagcagcagtatgcgttagcagccgcacatcaaccccacatcggtttagct
cccgctgcattcgtccccaacccatatatcatcagtgctgcgcccccagggacggacccc
tacacagctggattggctgcagcagcgacgctaggcccggctgtggtccctccccagtac
tacggagttactccctggggagtctaccctgccagtcttttccagcagcaagccgccgcc
gctgctgcagcaacaaattctgctaatcagcagaccaccccacaggctcagcaagggcag
cagcaggttctccgtggaggagccagccagcgtcctttgacgccgaatcagaaccagcag
ggacagcaagccgatccactggtggcagctgcagcggtgaattctgcccttgcgtttgga
caaggactggctgcgggcatgccaggttatccagtcttggctcctgctgcttactatgac
caaaccggtgcccttgtggtgaatgcaggagcgagaaatggtcttggagctcctgttcga
cttgtagctcccgccccagtcatcattagttcctcagctgcacaagcagctgttgcagcg
gctgcagcttcagcaaatggagcagccggtggtcttgctggaacaacaaatggaccattt
cgccctttaggaactcagcagccccagccccagccccagcagcagcccagtaacaacctg
gcatccagctctttctacggcaacaactctctgagcagcaattcacagagcagctccctc
ttctcccagggctccgcccagcctgccaacacatccttgggatttggaagtagcagttct
ctcggcgccaccctgggatcagcccttggagggtttggaacagcagttgcaaactccaac
actggcagtggctcccgccgtgactccctgactggcagcagtgacctttataagaggaca
tcgagcagcttgacccccattggacacagtttttataacggccttagcttttcctcctct
cctggacccgtgggcatgcctctccctagtcagggaccaggacattcacagacaccacct
ccttccctctcttcacatggatcctcttcaagcttaaacctgggaggactcacaaatggc
agtggaagatacatctctgctgctccaggcgctgaagccaagtaccgcagcgcaagcagt
gcctccagcctcttcagccccagcagcacccttttttcctcctcccgtttgcgatacgga
atgtctgatgtcatgccctctggcaggagcaggcttttggaagattttcgaaataaccga
tatcctaatttacaattgcgggagattgctgggcacataatggagttttcccaagaccag
catggttccagattcattcagctgaaacttgagcgtgccacaccagccgaacgccaactt
gtcttcaatgaaatccttcaggccgcttaccagctgatggtggatgtatttggaaattac
gtcattcagaagttctttgaatttggcagccttgaacagaagctggctttggctgagcgg
attcgaggccacgtcctgtcattggcactgcagatgtatggctgccgtgttatccagaaa
gctcttgagtttattccctcagaccagcagaatgaaatggttcgggaactggatggccac
gtcctcaagtgtgtgaaagaccagaatggcaatcacgtggtgcagaagtgcatcgaatgt
gtgcagccccagtctctgcagtttatcattgatgcgtttaaggggcaggtgtttgctttg
tccacgcatccttatggctgccgagtgattcagaggatcctggagcactgtctccctgac
cagacactccctattttagaggagcttcaccagcacacagagcaacttgtacaggatcag
tatggaaattacgtaatccagcatgtattggagcatggtcgtcctgaggataaaagtaaa
attgtagcagaaattcgaggcaatgtacttgtgttgagtcagcacaaatttgcaagcaat
gttgtggagaagtgtgtcactcacgcctcccgtacagagcgcgctgtgcttattgacgag
gtgtgcaccatgaacgatggtccccacagtgccttatacaccatgatgaaggaccagtat
gccaactacgtggtccagaagatgatcgatgtggcagagccagcccagaggaagatcgtc
atgcacaagatccggccccacatcgcgactcttcgcaagtatacttatggcaagcacatc
ctggccaagctggagaaatactacatgaagaatggcgttgacttagggcccatctgtggc
ccccctaatggtattatctga
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integrated database retrieval system