Bison bison bison (American bison): 104987059
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Entry
104987059 CDS
T08726
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
bbis
Bison bison bison (American bison)
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbis03009
]
104987059 (IGHMBP2)
03012 Translation factors [BR:
bbis03012
]
104987059 (IGHMBP2)
Enzymes [BR:
bbis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104987059 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
104987059 (IGHMBP2)
Ribosome biogenesis [BR:
bbis03009
]
Eukaryotic type
Other ribosome biogenesis factors
104987059 (IGHMBP2)
Translation factors [BR:
bbis03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104987059 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
SMUBP-2_HCS1_1B
AAA_12
AAA_30
AAA_19
zf-AN1
Viral_helicase1
DEAD
R3H
ResIII
nSTAND3
Helicase_RecD
AAA_22
UvrD-helicase
AAA_16
AAA_25
PhoH
Flavi_DEAD
IstB_IS21
SLFN-g3_helicase
DnaB_C
Zot
NPHP3_N
AAA
AAA_18
UvrD_C_2
ATPase
ABC_tran
AAA_31
NTPase_1
Motif
Other DBs
NCBI-GeneID:
104987059
NCBI-ProteinID:
XP_010836123
UniProt:
A0A6P3GXQ7
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MASTPVESFVTKQLELLELERDAEVEERRSWQENVSLKELQSRGVCLLKLQVSSQRTGLY
GRLLITLEPRRCVSAAVLPSNSFTSGDIVGLYDESGQLATGILTRITQKAVTVAFDESHD
SQLSLDQEHSYRLLKLANDVTYKRLKKALISLKKHHAGPASSLIEVLFGASDPSPPSEMP
PLTFCNPALDASQQEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKRGSKVLCCAP
SNVAVDNLVERLAQWKQRILRLGHPARLLDSIQQHSLDAVLARSDSARIVADIRRDIDQA
WAKNRKTQDKREKSNFRDEIKLLRKELKDREEAAMLESLAAANVVLATNTGASADGPLKL
LPDSHFDMVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTIVSHKDDEQSKGNPGE
VRLVGLHVQALVDAGVRAADIAVITPYNLQVDLLRQSLAHRLPELEIRSVDGFQGREKEA
VILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRTVSNHAFLKTLVDYLTEHG
EVRTAFEYLDDIVPENYSHEGAQAGGKPRGSAATARRAPGGTGPGRKKPSGAPLGSSEPQ
PQPSLNGGGGWEGAGSRDGADSFRAAIVEFVESEKTQLEFPASLNPHDRLRVHQIAEEFG
LRQGHGVGPLPRAPEPWEAQPRPRLGPVCAGSCWQGSGQAARRADVGPAGSWHPTSLSSP
AGVTDVCLPTGPAAIELPAEEDFDALVLAAIKADNTCGFAKCTASVVTLGQLCLHCGRRY
CLSHHLPEVHGCGERARAHARQRISREGVLYPSSGTKDRSLDPAKRAQLQRRLDKKLDEL
TGQRRSKRKEKGK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgacacctgtggagagcttcgtgaccaagcagttggaactgctggagctcgag
agagacgcggaggtcgaggagcgcagatcctggcaggaaaatgtctctctgaaggaactc
cagagccgaggcgtctgtttgctgaagctgcaggtatccagccagcggaccgggctgtac
ggacggctgctcattaccctcgagcccaggagatgcgtgtctgcagctgtgcttcctagt
aacagctttacttccggtgacatcgtgggtctgtatgacgaaagcggtcagctggccact
gggatcctgacccgcatcacccagaaagcggtcaccgtggcctttgatgagtcccacgat
tcccagctgagtttggaccaagagcattcctacagattgttgaagcttgccaacgacgtg
acttacaagcgactgaaaaaagctctgatttccctaaagaagcatcacgctggccctgcg
tcctcactcatagaggtcctcttcggcgcatcggaccccagtcctcccagcgagatgccc
ccgctgaccttctgcaaccccgccctggacgcctcccagcaggaagcggtcctgttcgcg
ctgtcccagaaggaactcgccattatccacgggcccccgggcactgggaagaccaccacc
gtggtggagatcatccttcaagctgtgaaacggggctcaaaggttctgtgctgtgcaccc
tctaacgtcgctgtggacaacttggtggagcggctggcccagtggaagcagaggattctc
cgcctcggccacccagcccgcctcctggactccatccagcagcactcgctggacgcggtc
ttagcgcgcagcgacagcgcccggatcgtggccgacatcaggagggacatcgaccaggcc
tgggcgaaaaacagaaagacccaggataagagagagaagagtaattttcgagatgaaatc
aagctgctgaggaaggagctgaaggacagggaggaggcagccatgctggagagcctggcg
gcggccaatgtggtcctcgccacaaacacgggtgcctctgcggatggcccgctaaagctg
ctgcccgacagccactttgacatggtggtcatcgacgagtgtgcccaggccctggaagcc
agctgctggatccccctgctgaaggcccggaagtgcatcctggccggagaccacaagcag
ctgcctcccaccatcgtctcccacaaggacgacgagcagtccaaaggaaaccccggtgaa
gtgcgcctcgtcggcctgcacgtccaggcgctggtggatgcgggcgtccgggccgccgac
attgccgtcatcacgccgtacaacctgcaggtggacctgctcagacagagcctcgcacac
aggctcccggagcttgagataaggtccgtcgatggcttccagggccgggagaaggaggct
gtgatcctgtccttcgtcagatccaacaggaaaggtgaagtgggcttcctcgccgaggac
cggcgcatcaacgtggcggtcacccgcgcgcggcggcacgtggccgtggtctgtgactcc
cgcaccgtcagcaaccacgccttcctgaagaccctggtggactacctcacggagcacggc
gaggtgcgcacggcctttgagtatcttgacgacatcgtccccgagaactactcccacgag
ggtgcccaggcaggcggaaagccccggggctctgccgcgacagccaggagggcccccggg
gggaccgggccaggccggaagaagccgagcggggcgcccttgggctcctctgagccgcag
cctcagcccagcctcaatggaggcggcggctgggagggcgccgggagcagagacggcgca
gacagcttcagggccgcgattgtggagttcgtggagagtgagaagacgcagctggagttc
cctgcctccctgaacccgcacgacaggctgcgggtccaccagatcgcggaggagttcggg
ctgaggcaaggccatggggttggtcctcttccccgggcccccgagccctgggaagcacag
cccagaccccgcctcgggcctgtctgcgctggctcctgttggcaggggtcgggccaggct
gctcgacgggcagacgtgggccctgcggggagttggcatccgacttccttgtcctcgcct
gctggggtgactgacgtctgtctccccacaggacccgcggccatagaactgcccgctgag
gaggactttgatgccctggtcttggctgccatcaaggcggacaacacctgcggcttcgcc
aagtgcacggccagcgtcgtgaccctgggccagctctgcttgcactgcggccgccgctac
tgcctcagccaccacctgcccgaggtccatggttgtggggagagggctcgcgcccacgct
cggcagaggatcagccgggaaggggtcctctaccccagcagtgggaccaaggacaggtcc
ctggaccccgccaagcgggcccagctgcagaggaggctggacaagaagctggacgaactg
accggccagaggcggagcaagaggaaggagaagggcaagtga
DBGET
integrated database retrieval system
