Bison bison bison (American bison): 104987157
Help
Entry
104987157 CDS
T08726
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104987157 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbis03019
]
104987157 (WDR33)
Messenger RNA biogenesis [BR:
bbis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104987157 (WDR33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Collagen
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
eIF2A
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
104987157
NCBI-ProteinID:
XP_010836239
Ensembl:
ENSBBBG00000022018
UniProt:
A0A6P3HAV6
LinkDB
All DBs
Position
Unknown
AA seq
1387 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQG
FQQPHPSQQLSMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDMHGPQGIQRHPGPHGPLGPQGPPGPQGNAGPQGHMGPQGPPGPQGHIGPQ
GPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLN
PRGMQGPPGPRENQGPAPQGMMLGHPPQEMRGPHPPSGLLGHGPQEMRGPQEMRGMQGPP
PQGSMLGPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPI
PFQQQKTALLGDGPRAPFNQEGQNAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSR
GPPNHHMGPMSERRHEQSSGPEHGPERGPFRGSQDCRGPPDRRGPHPEFPDDFSRPDDFH
PDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDARGAARGPPGAWEGR
RPGDDRFPRDPEDPRFRGRREESFRRGAPPRHEGRAPPRGRDGFPGPEDFGPEENFDATD
ETARGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPR
PDHPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMDAPGGPSEDRGGK
GRGGPGPSQRVPKSGRSSSLDGDHHDGYHRDEPFGGPPGSGTPSRGGRSGSNWGRGSNMN
SGPPRRGASRGVGGVGRSWGSNPLGLSGQYLRASADFPRERKGDLHRVALNSLWAAESQE
PLPRSSR
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atggctacagaaattggttctcctcctcggtttttccatatgccaaggttccaacaccag
gcacctcgacaactgttttataagcgaccagattttgcacagcagcaagcaatgcagcag
cttacctttgatggaaaacgaatgagaaaagcagtaaaccgaaaaaccatagactataat
ccatctgtaattaagtatttggagaatagaatatggcaaagagaccagagagatatgcga
gcaattcagcctgatgcaggttattataatgatctggttccacctattgggatgttgaat
aatcctatgaatgcagtaacaacaaagtttgttcgaacatcaacaaataaagtaaagtgt
ccagtatttgttgtcaggtggactccagaaggaagaaggttggtcactggagcttctagt
ggggagttcaccttgtggaatggactcactttcaattttgaaacaatattacaggctcat
gatagcccagtgagagccatgacttggtcacataatgacatgtggatgttgacagcagac
cacggaggatatgtgaaatattggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcacggtgctgatgtgaagtgtgtagactggcatccaacgaaagggttagttgtt
tcaggaagtaaagatagtcaacagccaatcaagttctgggatcccaagactgggcagagt
cttgcaacacttcatgcccataaaaacacagtaatggaagtgaaattaaatctcaatggc
aactggctactcacagcatcacgtgaccacctctgtaaacttttcgacatccgaaatctg
aaagaagagcttcaagtcttccgaggtcataagaaagaagctacagctgtggcctggcat
cctgttcatgaaggactttttgccagtggagggtctgatggctctttgttattttggcat
gttggagtagagaaagaagtgggtggaatggagatggcccatgaaggaatgatctggagt
ctggcttggcatccccttggacatattctctgctcaggctcaaatgaccatactagcaaa
ttttggacccgaaaccgaccaggtgataaaatgcgagatcgatacaacctcaacctatta
cctggaatgtctgaagatggagtggaatatgatgaccttgaacctaatagtctggcagta
attccagggatgggaataccagaacaactaaaattagctatggaacaagaacagatgggg
aaagatgaatcaaatgaaattgaaatgacaattccaggtttagattggggaatggaggag
gtaatgcagaaggatcagaaaaaagtgcctcagaagaaggttccgtatgcaaaacctatc
cctgctcagttccagcaggcatggatgcaaaataaagttccaattcctgccccaaacgag
gtattgaatgacagaaaagaagacattaaattggaagagaagaaaaaaacacaagcagaa
atcgaacaagagatggccacattacagtatactaacccacaacttctggagcaacttaaa
attgaaagacttgcacagaaacaggctgagcagattcagcctcctccttcatctggcacc
cctctcctgggaccccagccctttccaggacaaggtccaatgtctcagattcctcaaggt
tttcaacagcctcatccatctcagcagctgtcaatgaacatggctcaaatggggcctcca
ggtccacagggacagtttagaccccctggaccacagggacaaatgggaccacaaggccct
ccactgcatcagggaggtggggggccgcaaggattcatgggaccacaagggccccaggga
ccgccccaggggttgccaaggcctcaggacatgcatgggccccagggaatacaaaggcat
cctggacctcatggccctctgggacctcaaggaccacctggaccccagggtaatgctggt
cctcagggtcatatgggtcctcagggcccacctggcccacaaggtcacataggcccccaa
ggcccacctggtccccagggtcacttgggccctcagggacctcctggtactcaaggtatg
cagggaccacctggtcccagaggaatgcaaggacctccccatcctcacgggatacaaggc
gggccagggtctcaagggatccaaggtcctgtgtctcagggacctctgatgggattgaat
ccaagaggaatgcagggtcctccaggcccccgagagaaccagggtcctgctccccaaggg
atgatgctgggtcacccacctcaagagatgagaggtcctcatcctccaagtggactgctg
ggacatggccctcaggagatgcgaggtcctcaggagatgcgaggcatgcagggccctcca
ccccaaggatcgatgctgggccctccccaggaattgagggggcctccaggctcacaaggt
cagcaggggccgccccagggctctttgggacctccaccccagggtggcatgcaagggccc
cctggacctcagggacagcagaacccggcaagagggccacatccatctcaagggccaata
ccattccagcagcagaaaacagctctgctaggtgatgggccccgggcccccttcaaccag
gaaggacagaacgcaggccccccacccctgataccaggactagggcagcagggagcacaa
ggtcgcatcccccctcttaaccctggacaaggacctggccctaacaaaggtgattcgcgc
ggccctccaaaccatcacatgggcccaatgtcagagaggcggcacgagcagagcagcggc
cctgagcacggtcccgagagggggcctttccggggcagccaggactgcaggggtccccct
gataggcgtggccctcaccccgaattccctgatgacttcagcagaccagacgacttccac
cccgacaagcgctttggccaccggttacgagaatttgaggggcgaggaggccctttacca
caagaagagaagtggaggcgtgggggccctgggcctccattcccccctgaccacagggag
ttcagtgagggggatgcccggggtgcagcccggggccccccaggggcgtgggaaggccgc
agacctggagacgaccgcttcccccgggaccctgaggacccgcggttccgagggcgcaga
gaagaaagcttcagaagaggagcacccccaagacatgagggccgtgctccccccagagga
agagatggctttcctgggcccgaagactttggaccagaggagaattttgatgctactgac
gaaacagcccgaggaagggatctcagaggtcgaggtcggggtaccccccgaggaggaagg
aagggtttgcttcccactcctgatgagttccctcgctttgaaggaggacggaaaccagac
tcctgggatggaaatagagagccagggccaggacatgaacatttccgtgatgctccccgc
cctgatcatccccctcacgacggtcattccccagctagcagagaacggtcctcttctctc
caaggcatggacatggcatctttaccaccccgaaagcgcccctggcatgatgggccggga
acctctgagcacagagaaatggatgccccaggaggtccttctgaggatcgaggaggcaaa
ggccgagggggcccaggaccttctcagagagtgcctaagtccggacgttccagctccttg
gatggagaccaccatgatggataccacagagatgaaccttttgggggccctccaggcagt
ggtaccccttctagagggggccggagtggcagtaactggggtagagggagtaacatgaac
tctggcccaccaaggcgaggagcttcgaggggggtgggaggggtcggtagaagttggggc
tcaaaccccctaggcctctctggacagtatttaagagcttctgcggactttccaagagaa
agaaaaggagacctgcaccgtgtggccctgaactctctctgggcagctgaatcccaggag
cccctaccgaggtcttcaagatga
DBGET
integrated database retrieval system
