KEGG   Bison bison bison (American bison): 104987268
Entry
104987268         CDS       T08726                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
bbis  Bison bison bison (American bison)
Pathway
bbis03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:bbis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104987268 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbis03021]
    104987268 (TAF5L)
   03036 Chromosome and associated proteins [BR:bbis03036]
    104987268 (TAF5L)
Transcription machinery [BR:bbis03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     104987268 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     104987268 (TAF5L)
Chromosome and associated proteins [BR:bbis03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     104987268 (TAF5L)
    STAGA complex
     104987268 (TAF5L)
    TFTC complex
     104987268 (TAF5L)
    SAGA complex
     104987268 (TAF5L)
    SLIK complex
     104987268 (TAF5L)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd TFIID_NTD2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_IFT140_1st NBCH_WD40 RMC1_N Tricorn_2nd Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_WDR19_1st PEP5_VPS11_N PROPPIN eIF2A Ge1_WD40 WD_LRWD1 Nbas_N Beta-prop_IP5PC_F Mala_s_1-like vATP-synt_AC39
Other DBs
NCBI-GeneID: 104987268
NCBI-ProteinID: XP_010836409
Ensembl: ENSBBBG00000018590
UniProt: A0A6P3HBB7
LinkDB
Position
Unknown
AA seq 591 aa
MVMKRVRTEQIQMAVSCYLKRRQYGDADGPLKQGLRLSQSTEEMAASLTVQSESGCANIV
SAAPCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLTLIQNSPKSTVES
FYSRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFRLRAFLDNKYVVRLQEDSYNYLLRY
LQSDNNTALCRILAWHIHLDVQPAKRTDYQLYTSGGSFRGEGGGLEPADMPAPILQNEAA
LELLQESIKRVKDGPPSLTTIYFYAFYNTEQLLNTAEVSPDSKLLAAGFDNSCIKLWSLR
SKKLKSEPHQVDVSRIHLACDFLEEEDDEDDNLGTEMKVLRGHCGPVYSTRFLADSSGLL
SCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYP
LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSP
NGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWD
IRSSHCSTPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq 1776 nt   +upstreamnt  +downstreamnt
atggtcatgaaacgggtccgcacggagcagatccagatggccgtgtcctgctacctcaaa
cgccggcagtacggggatgcagacggtccgctgaagcaaggcctgcggctatcgcagagc
actgaggagatggccgccagcctcacagtccaatcagaatctggttgtgccaacatagtg
tccgcagccccttgccaggcagagccccagcaatatgaagtacagttcggacggctgcgg
aattttctcaccgattctgactcccagcacagccatgaagtgatgcctctcctctaccct
ctctttgtctacctccatctcaccctgatccagaacagtccgaagagcacagtggaaagc
ttttacagccgcttccatggaatgtttctgcagaatgccagccagaaggatgttatcgag
cagctccagaccactcagaccatccaggacatcctgtctaacttccggctgcgagccttc
ctggacaacaaatacgtggttcgtctgcaggaagacagctacaactaccttctccgctac
ctccagagtgacaacaacactgcgctgtgcaggatcctcgcctggcacatccatctggac
gtgcagcccgccaagaggacagactaccagctctacaccagtggtggctccttccgaggc
gagggtggcggcctggagcccgccgacatgccagcgcccatcctgcagaatgaggccgcg
ctggagctcctgcaggagagcatcaagcgcgtcaaggacggccccccctccctcaccacc
atctacttctatgccttctacaacacagagcagctgctgaacactgcagaggtctccccg
gacagcaagctgctcgcagcaggctttgacaactcctgtataaaactgtggagtctgcgt
tccaagaagttaaagtccgaaccccatcaagtagatgtgtcccgcatccacttggcttgt
gatttcctagaggaggaggatgacgaggacgacaacttaggcacagagatgaaggtcctg
cggggacactgtgggccagtgtacagcaccaggttcctcgcggacagctcggggctgctc
tcctgctctgaagacatgtccatcaggtactgggacctgggcagcttcaccaacaccgtg
ctgtaccagggccacgcctaccccgtatgggacctggacatcagcccgcacagcctgtac
ttcgccagcgcgtcccacgaccgcacagcccggctgtggtcatttgatcggacgtacccg
ctgcgaatctacgccgggcacctggcagacgtggactgcgtcaagttccaccccaattca
aactacttagccacgggctcaaccgacaagacggtgcggctgtggagcactcagcagggg
aactccgtgaggctcttcacgggccaccgcggccctgtgctctccctggctttttccccc
aacggtaagtacctggcatcagcaggcgaggaccagcggctgaagctgtgggacttggca
tccgggaccctctacaaagagctgcggggccacacggacaacatcaccagcctcaccttc
agcccagacagcagcctggtcgcgtcagcgtccatggacaactccgtgcgtgtctgggac
atcagaagctcacactgtagcacacctgccgacggctcatccagcgagctcgtgggcgtc
tacaccggccagatgagcaatgtgctgagcgtgcagttcatggcctgcaacctcctgctg
gtgactggaatcacacaagaaaatcaggaacattga

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