KEGG   Bison bison bison (American bison): 104987619
Entry
104987619         CDS       T08726                                 
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
bbis  Bison bison bison (American bison)
Pathway
bbis01524  Platinum drug resistance
bbis03430  Mismatch repair
bbis05200  Pathways in cancer
bbis05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:bbis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    104987619 (MSH6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    104987619 (MSH6)
  09162 Cancer: specific types
   05210 Colorectal cancer
    104987619 (MSH6)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    104987619 (MSH6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbis03400]
    104987619 (MSH6)
DNA repair and recombination proteins [BR:bbis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     104987619 (MSH6)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II HORMA MUM1-like_PWWP WPP
Other DBs
NCBI-GeneID: 104987619
NCBI-ProteinID: XP_010836952
Ensembl: ENSBBBG00000024950
UniProt: A0A6P3HC98
LinkDB
Position
Unknown
AA seq 1361 aa
MSRQSTLFSFFPKSPAVNNANKAPVRASSGSSAAAAATGASPSPGGDAAWNEAGPEPLAG
TTSRAEARNLNGGLRKSASPAVPASSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI
REKGKSARVHVQFFDDSPTRGWVSRRLLKPYTGSHSKEAQKGGHFYSAKPEILRAMQRAD
EALNKDKIKRLELAVCDEPSEPEEEEETEVGATYTSDKSEEENDIESEEEVRPKVQGSRR
SSRQIKKRRVISDSESDVGGSDVEFKPDTKEEASSDEISSGVGDSDSEGLDTPVKVAPKR
KRMVTGNGSLKRKSSRKEMPSATKRATGISSETKNTLSAFSVPQNSEPQAHISGGCDDSN
RPTVWYHETLEWLKEEKRRDVHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQN
FDLVIFYKVGKFYEMYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKV
ARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYSVLEGDPSENYSKYLL
SLKEKEEESSGHTRVYGVCFVDTSLGRFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGN
LSMDTKMILKSSLSSSLQEGLIPGSQFWDAAKTLRTLLEEGYFTDKLNEDGGVMLPQVLK
GMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYVPLDSDMVHAT
RPGAVFAKANQRMVLDAVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCA
PLCNPHAINDRLDAIEDLMVVPDKISEVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDS
RAIMYEETTYSKKKIIDFLSALEGFKVICKIIGIMEEVIDDFKSKILKQVLTLQTKSPEG
RFPDLTSELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRS
RIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLGNLIN
AEERRDASLKDCMRRLFYNFDKNYKDWQAAVECIAVLDVLLCLTNYSRGGDGPMCRPIIL
LPEEDTPPFLDLKGSRHPCITKTFFGDDFIPNDILIGCEEEEEENGKAYCVLVTGPNMGG
KSTLMRQAGLLAIMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETAS
ILTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQN
VAVRLGHMACMVENECEDPSQETITFLYKFINGACPKSYGFNAARLANLPEEVIQKGHRK
AREFEKMTQSLRLFREVCLASERSTVDADAVHKLLTLIEEL
NT seq 4086 nt   +upstreamnt  +downstreamnt
atgtcgcgacagagcacgctgtttagcttcttccctaagtctccagccgtgaataatgcc
aacaaagcccccgtcagagcctcaagtggaagcagcgccgccgccgctgccaccggggcc
tccccttccccaggcggggatgcggcctggaacgaggccgggcctgagcccctagcgggt
accacgtcgcgggccgaggccaggaacctcaacggagggctgcggaagtcggcatcccct
gcggtccccgccagcagttcttgtgacttctcaccaggtgatttggtttgggccaagatg
gagggttacccttggtggccttgcctggtttacaaccacccttttgatggaacattcatc
cgtgagaaaggaaagtctgcccgagttcatgtacagttttttgatgacagcccaacacgg
ggctgggttagcagaaggctattaaagccatatacaggttcacattcaaaggaagcccag
aaaggaggtcatttttatagtgcaaagcctgaaatactcagagcaatgcaacgtgcagat
gaagccttgaataaagacaagattaagaggcttgagttggcagtatgtgatgagccctca
gagccagaggaggaagaagagacggaggtaggtgccacttacacatcagataagagtgaa
gaggaaaatgacattgagagtgaagaggaagtgaggccaaaggtgcaaggatccagacga
agtagccgacaaataaaaaaacgaagggtcatatcagactctgagagtgacgttggtggc
tctgatgtggaattcaagccagacactaaggaggaagcaagcagtgatgaaataagcagt
ggcgtgggggacagtgatagtgaaggcctggacacccccgtcaaagttgctccaaagcgg
aagagaatggtaactgggaatggttccctcaagaggaagagttcaaggaaggaaatgcct
tcagccaccaaacgagcaactggcatttcatcagaaaccaagaatactttgagtgctttc
tctgtccctcaaaattctgaaccccaagcccacattagtgggggatgtgatgacagtaat
cgccccactgtctggtatcatgaaactttagagtggcttaaggaggaaaagaggagagat
gtgcacaggaggcggcctgatcaccctgattttgatgcatccacactctatgtgcccgag
gatttccttaattcctgtactcctgggatgaggaagtggtggcaaattaagtctcagaac
tttgatctggtcatattttataaagtggggaagttttatgagatgtaccacatggatgct
cttattggggtcagtgaactagggctggtattcatgaaaggcaactgggcccattctggt
ttccctgagattgcatttggccgatactcagattccctggtccagaagggctataaagta
gcacgagtagaacagactgagaccccagaaatgatggaggcacgatgccgaaaaatggca
cacatatctaagtatgacagagtggtgcggagggagatctgtaggatcattacgaagggt
acacagacctacagtgtgctggaaggtgacccctcggagaactacagtaaataccttctt
agcctcaaagagaaagaagaggagtcttctggccacactcgcgtgtatggagtatgcttt
gttgatacctctctagggaggttcttcataggtcagttttcagatgatcgccattgttcc
aggtttaggactttagtggcacactatcctccagtacaagtcttatttgagaagggaaat
ctctcaatggatactaagatgattctcaagagttcattatcctcttctcttcaggaaggt
ctgataccgggctcccagttttgggatgcagccaaaactttgagaactctccttgaagaa
ggatattttacagacaagttaaatgaggacggtggggtgatgctaccccaggtgcttaaa
ggtatgacctcggagtcagattctattggattgacaccaggagagaagagtgaattggcc
ctctctgctcttggtggttgtgtcttctacctcaaaaaatgccttattgatcaggagctt
ttatcaatggctaattttgaagaatatgttcccttggattctgacatggtccatgctaca
agacctggtgctgtctttgctaaagccaatcaacgaatggtgctagatgctgtgacatta
aacaacttggagatttttctgaatggaacaaacggttctactgaagggaccttgttagag
aagattgacacctgccatactccctttggtaaacggctcttaaagcagtggctttgtgcc
ccactctgtaaccctcatgcgatcaatgatcgcctggatgccatagaagacctaatggtt
gtgcctgacaaaatctctgaggttgtagaccttcttaagaagcttccagaccttgagaga
ctcctgagtaaaattcataatgttgggtctcccctcaagagccagaaccacccagatagc
agggctataatgtatgaagaaaccacatacagcaaaaaaaagattattgattttctttct
gctctggaaggattcaaagtaatatgtaaaattatagggattatggaagaagtcattgat
gactttaagtctaaaatcctcaagcaggtccttactctgcagacaaaaagtcctgaaggg
cgctttcctgatttgacttcagaactgaaccgatgggatacagcctttgaccatgaaaag
gctcgaaagactggactgattactcccaaagcaggatttgactctgattatgaccaagct
cttgctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgcagt
cgaattggctgtagaaccatagtttactggggaattggtaggaatcgttaccagttggaa
attccagagaatttcatcacccgtaatttgccagaagaatatgagttgaaatccaccaaa
aagggttgtaaacgatactggaccaaaacaattgagaagaagttgggtaatctgataaat
gccgaagaacggagagacgcatcattaaaggactgcatgaggcgactgttctataacttt
gataaaaattacaaggactggcaggctgctgtggagtgcatcgcagtgttggatgtgtta
ttgtgcctgaccaactacagtcgagggggtgatggtcctatgtgtcgtccaataattctg
ttgccagaagaagatactcctccctttctagaccttaaaggatcacgccatccctgcatt
acgaagactttttttggtgatgactttattcctaatgacattctaataggctgtgaggaa
gaggaggaggaaaatggcaaagcttattgtgtgcttgttactggaccaaatatgggaggc
aagtctacacttatgagacaggctggcctattagctataatggcccagatgggctgttac
gtaccagctgaagtgtgtaggctcacaccaattgatagagtgtttactagacttggtgcc
tcagacagaataatgtcaggtgaaagtacattttttgttgaattgagtgaaactgccagt
atacttacacatgcaacagcacattctctggtgcttgtggatgaattaggaagaggtacc
gcaacattcgatgggacagcaatagcaaacgcagttgtgaaagaacttgctgagaacata
aagtgtcgtacgttgttttccacccactaccattcattagttgaagattattctcaaaat
gttgcagtgcgcctaggacacatggcatgcatggtagaaaatgaatgtgaagatcccagc
caggagactattaccttcctctataaattcattaatggagcctgtccgaaaagctatggt
tttaatgcagcaaggcttgctaatcttccagaggaggttattcaaaagggacatagaaaa
gcaagagaatttgagaagatgactcagtcactgcggttatttcgggaggtttgtttggct
agtgaaaggtctactgtggatgctgatgctgtccataagttgctgactttgattgaggaa
ttatag

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