Bison bison bison (American bison): 104987619
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Entry
104987619 CDS
T08726
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis01524
Platinum drug resistance
bbis03430
Mismatch repair
bbis05200
Pathways in cancer
bbis05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104987619 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
104987619 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
104987619 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
104987619 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbis03400
]
104987619 (MSH6)
DNA repair and recombination proteins [BR:
bbis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104987619 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
HORMA
MUM1-like_PWWP
WPP
Motif
Other DBs
NCBI-GeneID:
104987619
NCBI-ProteinID:
XP_010836952
Ensembl:
ENSBBBG00000024950
UniProt:
A0A6P3HC98
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MSRQSTLFSFFPKSPAVNNANKAPVRASSGSSAAAAATGASPSPGGDAAWNEAGPEPLAG
TTSRAEARNLNGGLRKSASPAVPASSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI
REKGKSARVHVQFFDDSPTRGWVSRRLLKPYTGSHSKEAQKGGHFYSAKPEILRAMQRAD
EALNKDKIKRLELAVCDEPSEPEEEEETEVGATYTSDKSEEENDIESEEEVRPKVQGSRR
SSRQIKKRRVISDSESDVGGSDVEFKPDTKEEASSDEISSGVGDSDSEGLDTPVKVAPKR
KRMVTGNGSLKRKSSRKEMPSATKRATGISSETKNTLSAFSVPQNSEPQAHISGGCDDSN
RPTVWYHETLEWLKEEKRRDVHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQN
FDLVIFYKVGKFYEMYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKV
ARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYSVLEGDPSENYSKYLL
SLKEKEEESSGHTRVYGVCFVDTSLGRFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGN
LSMDTKMILKSSLSSSLQEGLIPGSQFWDAAKTLRTLLEEGYFTDKLNEDGGVMLPQVLK
GMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYVPLDSDMVHAT
RPGAVFAKANQRMVLDAVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCA
PLCNPHAINDRLDAIEDLMVVPDKISEVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDS
RAIMYEETTYSKKKIIDFLSALEGFKVICKIIGIMEEVIDDFKSKILKQVLTLQTKSPEG
RFPDLTSELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRS
RIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLGNLIN
AEERRDASLKDCMRRLFYNFDKNYKDWQAAVECIAVLDVLLCLTNYSRGGDGPMCRPIIL
LPEEDTPPFLDLKGSRHPCITKTFFGDDFIPNDILIGCEEEEEENGKAYCVLVTGPNMGG
KSTLMRQAGLLAIMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETAS
ILTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQN
VAVRLGHMACMVENECEDPSQETITFLYKFINGACPKSYGFNAARLANLPEEVIQKGHRK
AREFEKMTQSLRLFREVCLASERSTVDADAVHKLLTLIEEL
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctgtttagcttcttccctaagtctccagccgtgaataatgcc
aacaaagcccccgtcagagcctcaagtggaagcagcgccgccgccgctgccaccggggcc
tccccttccccaggcggggatgcggcctggaacgaggccgggcctgagcccctagcgggt
accacgtcgcgggccgaggccaggaacctcaacggagggctgcggaagtcggcatcccct
gcggtccccgccagcagttcttgtgacttctcaccaggtgatttggtttgggccaagatg
gagggttacccttggtggccttgcctggtttacaaccacccttttgatggaacattcatc
cgtgagaaaggaaagtctgcccgagttcatgtacagttttttgatgacagcccaacacgg
ggctgggttagcagaaggctattaaagccatatacaggttcacattcaaaggaagcccag
aaaggaggtcatttttatagtgcaaagcctgaaatactcagagcaatgcaacgtgcagat
gaagccttgaataaagacaagattaagaggcttgagttggcagtatgtgatgagccctca
gagccagaggaggaagaagagacggaggtaggtgccacttacacatcagataagagtgaa
gaggaaaatgacattgagagtgaagaggaagtgaggccaaaggtgcaaggatccagacga
agtagccgacaaataaaaaaacgaagggtcatatcagactctgagagtgacgttggtggc
tctgatgtggaattcaagccagacactaaggaggaagcaagcagtgatgaaataagcagt
ggcgtgggggacagtgatagtgaaggcctggacacccccgtcaaagttgctccaaagcgg
aagagaatggtaactgggaatggttccctcaagaggaagagttcaaggaaggaaatgcct
tcagccaccaaacgagcaactggcatttcatcagaaaccaagaatactttgagtgctttc
tctgtccctcaaaattctgaaccccaagcccacattagtgggggatgtgatgacagtaat
cgccccactgtctggtatcatgaaactttagagtggcttaaggaggaaaagaggagagat
gtgcacaggaggcggcctgatcaccctgattttgatgcatccacactctatgtgcccgag
gatttccttaattcctgtactcctgggatgaggaagtggtggcaaattaagtctcagaac
tttgatctggtcatattttataaagtggggaagttttatgagatgtaccacatggatgct
cttattggggtcagtgaactagggctggtattcatgaaaggcaactgggcccattctggt
ttccctgagattgcatttggccgatactcagattccctggtccagaagggctataaagta
gcacgagtagaacagactgagaccccagaaatgatggaggcacgatgccgaaaaatggca
cacatatctaagtatgacagagtggtgcggagggagatctgtaggatcattacgaagggt
acacagacctacagtgtgctggaaggtgacccctcggagaactacagtaaataccttctt
agcctcaaagagaaagaagaggagtcttctggccacactcgcgtgtatggagtatgcttt
gttgatacctctctagggaggttcttcataggtcagttttcagatgatcgccattgttcc
aggtttaggactttagtggcacactatcctccagtacaagtcttatttgagaagggaaat
ctctcaatggatactaagatgattctcaagagttcattatcctcttctcttcaggaaggt
ctgataccgggctcccagttttgggatgcagccaaaactttgagaactctccttgaagaa
ggatattttacagacaagttaaatgaggacggtggggtgatgctaccccaggtgcttaaa
ggtatgacctcggagtcagattctattggattgacaccaggagagaagagtgaattggcc
ctctctgctcttggtggttgtgtcttctacctcaaaaaatgccttattgatcaggagctt
ttatcaatggctaattttgaagaatatgttcccttggattctgacatggtccatgctaca
agacctggtgctgtctttgctaaagccaatcaacgaatggtgctagatgctgtgacatta
aacaacttggagatttttctgaatggaacaaacggttctactgaagggaccttgttagag
aagattgacacctgccatactccctttggtaaacggctcttaaagcagtggctttgtgcc
ccactctgtaaccctcatgcgatcaatgatcgcctggatgccatagaagacctaatggtt
gtgcctgacaaaatctctgaggttgtagaccttcttaagaagcttccagaccttgagaga
ctcctgagtaaaattcataatgttgggtctcccctcaagagccagaaccacccagatagc
agggctataatgtatgaagaaaccacatacagcaaaaaaaagattattgattttctttct
gctctggaaggattcaaagtaatatgtaaaattatagggattatggaagaagtcattgat
gactttaagtctaaaatcctcaagcaggtccttactctgcagacaaaaagtcctgaaggg
cgctttcctgatttgacttcagaactgaaccgatgggatacagcctttgaccatgaaaag
gctcgaaagactggactgattactcccaaagcaggatttgactctgattatgaccaagct
cttgctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgcagt
cgaattggctgtagaaccatagtttactggggaattggtaggaatcgttaccagttggaa
attccagagaatttcatcacccgtaatttgccagaagaatatgagttgaaatccaccaaa
aagggttgtaaacgatactggaccaaaacaattgagaagaagttgggtaatctgataaat
gccgaagaacggagagacgcatcattaaaggactgcatgaggcgactgttctataacttt
gataaaaattacaaggactggcaggctgctgtggagtgcatcgcagtgttggatgtgtta
ttgtgcctgaccaactacagtcgagggggtgatggtcctatgtgtcgtccaataattctg
ttgccagaagaagatactcctccctttctagaccttaaaggatcacgccatccctgcatt
acgaagactttttttggtgatgactttattcctaatgacattctaataggctgtgaggaa
gaggaggaggaaaatggcaaagcttattgtgtgcttgttactggaccaaatatgggaggc
aagtctacacttatgagacaggctggcctattagctataatggcccagatgggctgttac
gtaccagctgaagtgtgtaggctcacaccaattgatagagtgtttactagacttggtgcc
tcagacagaataatgtcaggtgaaagtacattttttgttgaattgagtgaaactgccagt
atacttacacatgcaacagcacattctctggtgcttgtggatgaattaggaagaggtacc
gcaacattcgatgggacagcaatagcaaacgcagttgtgaaagaacttgctgagaacata
aagtgtcgtacgttgttttccacccactaccattcattagttgaagattattctcaaaat
gttgcagtgcgcctaggacacatggcatgcatggtagaaaatgaatgtgaagatcccagc
caggagactattaccttcctctataaattcattaatggagcctgtccgaaaagctatggt
tttaatgcagcaaggcttgctaatcttccagaggaggttattcaaaagggacatagaaaa
gcaagagaatttgagaagatgactcagtcactgcggttatttcgggaggtttgtttggct
agtgaaaggtctactgtggatgctgatgctgtccataagttgctgactttgattgaggaa
ttatag
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