KEGG   Bison bison bison (American bison): 104988153
Entry
104988153         CDS       T08726                                 
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bbis  Bison bison bison (American bison)
Pathway
bbis03082  ATP-dependent chromatin remodeling
bbis04714  Thermogenesis
bbis05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:bbis00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104988153 (SMARCC2)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    104988153 (SMARCC2)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    104988153 (SMARCC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbis03021]
    104988153 (SMARCC2)
   03036 Chromosome and associated proteins [BR:bbis03036]
    104988153 (SMARCC2)
Transcription machinery [BR:bbis03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     104988153 (SMARCC2)
Chromosome and associated proteins [BR:bbis03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    104988153 (SMARCC2)
   PBAF complex
    104988153 (SMARCC2)
   GBAF(ncBAF) complex
    104988153 (SMARCC2)
SSDB
Motif
Pfam: SWIRM-assoc_2 SWIRM-assoc_3 SWIRM SWIRM-assoc_1 Chromo
Other DBs
NCBI-GeneID: 104988153
NCBI-ProteinID: XP_010837670
Ensembl: ENSBBBG00000013833
UniProt: A0A6P3HGE8
LinkDB
Position
Unknown
AA seq 1085 aa
TVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIK
CFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSR
PNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNSASHVVYPVPGNLEEEEWVRPVMKRDK
QVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAKWILDTDTFNEWMNEEDYEV
NDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKG
PSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTD
LDEQEDESMETTGKDEDESSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVH
AIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMR
VHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKTPQGRQVDADTK
AGRKGKELDDLVPETAKGKPELQNSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVP
SKSKAAASATREWTEQETLLLLEALEPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSA
LEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGT
DEARAEGQATEDKKEPKEPREGVGTVEEEAKEKTSEAPKKDDEKGKDGDSEKESEKSDGD
PTADPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHL
AAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHM
EQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPLPPPGAAGPPTVHGLAMAPASVAPA
PAGSGAPPGSLGPSEQLGQAGSTVGPQQQPPAGAPQPGAVPPGVPPPGPHGPSPFPNQQT
PPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTP
VPPPQ
NT seq 3258 nt   +upstreamnt  +downstreamnt
accgtgacccagttcgacaacgtgcggctgtggctcggcaagaactacaagaagtatata
caagccgaaccacccaccaacaagtccctgtctagcctggttgtacagttgctacaattt
caggaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaa
tgtttcctagatttcaaagcaggaggctccctgtgccacatacttgcagctgcctacaaa
ttcaagagtgatcagggatggcggcgttacgatttccagaatccatcacgcatggaccgc
aatgtggaaatgttcatgaccattgagaagtccttggtgcagaataattgcctgtctcga
cctaacatttttctgtgcccagaaattgaacccaaactgctagggaaattaaaagacatt
atcaagagacatcagggaacggtcactgaggataagaacagtgcctcccacgttgtgtat
cccgttccagggaacctggaggaagaggaatgggtacggccagtcatgaagagagacaag
caggttcttctgcactggggctactatcctgacagttatgacacatggatcccagccagt
gaaattgaagcgtctgtggaagacgctccaactcctgagaaacctaggaaggttcatgca
aaatggattctggacacagacaccttcaatgagtggatgaatgaggaagactacgaagta
aatgatgacaaaaaccctgtctcccgccgaaagaagatttcagccaagacgctgacagat
gaggtgaacagcccagattcagaccgacgggacaagaagggggggaactataagaagagg
aagcgctccccctcaccttcaccaaccccagaagccaagaagaagaatgctaagaaaggt
ccttcaacaccttacaccaagtcaaagcgaggccacagagaggaggagcaagaagacctg
acaaaggacatggatgaaccctcaccagtccccaatgtggaagaggtgacattgcccaag
acagtcaacactaagaaggactcggagtcagccccagtcaaaggaggcaccatgactgac
ctggatgaacaagaggacgaaagcatggagaccacgggcaaggatgaggacgagagcagc
acgggcaacaagggggagcagaccaagaacccagacctgcatgaggacaacgtgactgag
cagacccaccacatcatcatcccgagctatgctgcctggtttgactacaacagtgttcac
gccatcgaacggagggctctccctgagttcttcaatggcaagaacaagtccaagactcca
gaaatctacctggcctatcggaacttcatgattgatacttaccggctgaacccccaggag
tatctcacgtccactgcctgtcgcaggaacctggcgggtgatgtctgtgccatcatgagg
gtccatgccttcctagaacagtggggtctcattaactaccaggtggatgccgagagtcga
ccaactcccatggggcctccgcccacctctcacttccatgtcttggcggacacaccatcc
gggctggtgccgctgcagcccaagaccccgcagggccgccaggttgatgctgataccaag
gctgggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagcca
gagctgcagaactctgcttcccagcaaatgctcaacttccctgacaaaggcaaggagaaa
ccgacagacatgcagaactttgggctgcgcacagacatgtacacgaagaagaacgtcccc
tccaagagcaaagctgcagccagtgccactcgagagtggacagaacaggagaccctgctg
ctcctggaggcactggaacctatccccttcagccagtcaggcaaccctgtgatgagcacc
gttgccttcctggcctctgtcgtcgaccctcgagtggcctcagctgctgcgaagtcagcc
ctagaagagttctccaaaatgaaggaagaggtacccacagctttggtggaggcccacgtt
aggaaagtggaagaagccgccaaagtgacaggcaaggcagacccagcctttggtctggaa
agcagtggcatcgcagggaccacctctgatgagccggagaggatcgaggagagtgggact
gacgaagcgcgggcagagggccaggccacagaggataagaaggaacccaaggaacctcga
gaaggagttgggactgtggaggaagaagcaaaggagaagaccagtgaggcacccaagaag
gacgatgagaaagggaaggatggcgatagcgagaaggagtcagaaaagagtgatggagac
ccgacagcggatcctgagaaggagaaggagcccaaggaagggcaggaggaggtgctgaaa
gaagtggtggagtcggagggggaaaggaagacgaaggtggagcgtgacattggcgagggc
aacctctccaccgccgccgccgccgccctggctgctgccgctgtgaaggccaagcacttg
gctgctgttgaggagaggaagatcaaatcgctggtggccctgctggtggagacccagatg
aaaaagttggaaatcaaactccggcactttgaggagctagagacgatcatggaccgggag
cgagaagcactggagtaccagaggcagcagctcttggccgacagacaagccttccacatg
gagcagctgaagtacgcagagatgcgggcccggcagcagcacttccagcagatgcaccaa
cagcagcagcagccaccaccagccctgcccccgggctcccagcctctcccacccccaggc
gctgctgggccacccactgtccatggcttggccatggctccagcctctgtggccccggct
cctgcgggcagtggggcccctcctggaagcttggggccctccgaacagcttgggcaggca
gggtcaactgtggggccacagcagcagccaccagctggcgccccccagcctggggccgtc
ccaccaggggtacccccccctggaccccatggcccctcaccgttccccaaccaacaaact
cctccctcaatgatgccaggggcagtgccaggcagcgggcacccaggcgtggcggcccag
agccctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgcca
gacccaggcacccccctgcctccagaccccacggccccgagcccaggcacagtcaccccc
gtgccacccccacagtga

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