Bison bison bison (American bison): 104988283
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Entry
104988283 CDS
T08726
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104988283 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbis03032
]
104988283 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
bbis03400
]
104988283 (TOPBP1)
DNA replication proteins [BR:
bbis03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104988283 (TOPBP1)
DNA repair and recombination proteins [BR:
bbis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104988283 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
104988283
NCBI-ProteinID:
XP_010837862
Ensembl:
ENSBBBG00000006003
UniProt:
A0A6P3HER7
LinkDB
All DBs
Position
Unknown
AA seq
1521 aa
AA seq
DB search
MSKNDKEPFFVKFLKSSDNSECFFEALESIKEFQSEEYLQIITEEEALKIKENDRSLYIC
DPFSGDAFDHLKKLGCRIVGPQVVIFCMHHQRCVPRAEHPVYNMVMSDVTVSCTSLEKDR
REEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
EKKIARYTDINMEDFKCPIFLGCIICVTGLCTLDRKSVQQLTVKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTTQWFFDSVEKGFCQDESIYKTEPRSEAKSMPDTSTPT
GQINTIDSRTLSDVSHISNVNASCINESICNSVNSKLEPTIENLENLDISAFQAPEDLLD
GCRICLCGFNGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDDDDELKQFWDKSAHRPH
VVGAKWLLECFSKGYMLPEEPYIHINYQPVEIPVSDPPESKTALLKRKNNGFSKSDFVPE
EKHEQADEDLLSQYQTNNPTVVEVAKSEVGLCSDSTHVEPRNDSSHISLQEHQSSISHCL
PDVSTITEEGLFSQKSFLVLGFSNENESNIAIIIRENAGKIVSLQSRVVADYAVVPLLGC
EVQATVGEVVTNTWLVMCIDYQTLIDPKSNPLFTPVPVMAGMTPLEGCVLSFSQCVGAEK
DSLTFLANHLGASVQEYFVRKSNAKKGMFASTHLVLKEPGGSKYEAAKKWNLPAVTIAWL
LESARLGKRANENHFLIENSSKEEQSLETETTNEVNLNPDTPEHPVTHLETQRKTAVTPL
DMNRFQSKAFRTVMSQHSGQASVSPSPGQSLQKEPSLHLDTPSKFLSKDKLFKPSFDVKD
ALAALETPGGPSQQKRKLSTPLSEVIVKNLKLALANSSRNAVALSASPQLKDAHSEKEDA
PKPLENVVVCVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKSV
KERGVHIVSEHWLLECAQEYKHLPESLYPHTYNPKMSLDISAVQDGRLCNNRLLSAGSAV
RDDEPDHMPLEENDIDNMTTSNKELTTSNGNGRNDSKGALTQTLEMRENFQKQLQEIMSA
TSIVKPQGQRTSLSRSGCNSTSSTPDSTRSARSGRSRVLEALRQSRQTVPDVNTEPSQNE
QIIWDDPTAREERARLASNLQWPSCPTQYSELQVDVKKLEDSPFQEPLHDSEIAEQAVCD
PGNVCVTGAPKHPISEELEAPVKDSHLIPTPQAPSIAFPLANPPVAPHPREKIITIEETH
EDLKKQYIFQLSSLNPQERIDYCHLIEKLGGSVIEKQCFDPSCTHIVVGHPLRNEKYLAS
VAAGKWVLHRSYLEACRTAGRFMSEEDYEWGSSSILDVLTGINVQQRKLALAAMRWRKKI
QQRQESGITEGAFSGWKVILHVDQSRESGFKRLLQSGGAKVLPGYSVSLFKEATHLFSDF
NKQKPDDSGVNIAEAAAQNVYCLKTEYIADFLMQESPPQVENYCLPEAASFLQNKKEPGP
GFSQKRKAPAEKNKIKRPRVQ
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaatgacaaagaaccgttttttgtgaagtttttaaagtcttcagacaattct
gaatgtttttttgaagctcttgagtcaataaaagagttccaatcagaagaatatcttcag
attattacagaagaagaggcattgaaaataaaggagaatgatagatcactgtatatctgt
gacccctttagtggtgatgcctttgatcatctcaaaaagcttggttgcagaattgttggt
cctcaagtagtcatattttgtatgcaccaccagcgatgtgtcccaagagctgaacatcca
gtttataacatggttatgtctgatgtaaccgtgtcctgtacaagcctggaaaaagacaga
agggaagaagttcataaatatgtacaaatgatgggtggacgcgtatacagagaccttaac
gtatcagtaactcaccttattgcaggagaagttggtagcaaaaaatacttagttgctgca
aacctaaagaaacctattttgcttccctcttggataaaaacactttgggagaagtcacag
gagaagaaaatagctagatatactgatataaacatggaagacttcaagtgtcctattttt
cttggttgcataatctgtgtgactggcttatgtaccttagacaggaaatcagttcagcag
ctaacagtaaagcatggaggacagtacatgggacagttgaaaatgaatgagtgtacacac
ctcattgtgcaagaaccaaaaggtcaaaaatatgaatgtgccaagagatggaatgtacac
tgtgtgaccacgcagtggttttttgacagtgttgagaaaggtttttgtcaggatgaatcc
atatacaagacagagcctagatcagaagcaaagagtatgcctgatacttcaactcctact
ggccagatcaacacaattgatagtcgtactctttcagatgtcagccatatttccaacgtc
aatgcaagctgcataaatgaatcaatatgtaattcagttaatagcaaactggaacctaca
attgaaaacctggaaaatttggatatcagtgcatttcaggcacctgaagatttattagat
ggttgtcggatctgtctttgtggttttaatggcagaaagctagataaactgagaagactt
attaacagtggaggtggagtccgttttaatcagctcaatgaagatgtaactcatgttatt
gtgggagatgatgatgatgaattgaagcagttttgggataaatcagcccacaggccgcat
gtagtgggagcaaaatggttgctagagtgttttagtaaaggctacatgcttcctgaagag
ccatacatccacattaactaccagccagtggaaattccagtttcagatccacctgaaagt
aaaacagcccttttgaaaaggaagaacaacggcttctctaagagtgactttgttcctgag
gagaagcatgagcaagctgatgaagatctgctctctcagtatcagactaataaccccaca
gtagttgaagttgccaagtctgaagttgggctctgtagtgactctactcatgtggagccc
cgtaatgattcttctcatatttctctgcaagaacaccagtcttccatcagtcattgcctc
cctgatgtttctacaattaccgaagaaggtttatttagccaaaagagtttcctagttttg
ggttttagtaatgaaaatgaatctaatattgcaatcatcataagagaaaatgctggaaaa
attgtgtcccttcagagcagagttgttgctgattatgctgtggttcctctgctgggatgt
gaagtacaggcgactgtgggagaagttgtaacaaacacatggctggtaatgtgtatagac
taccagactttaattgatccaaagtcaaatcctctcttcacaccagttccagttatggca
ggaatgactcctttagagggttgtgttctttcattcagccaatgtgtaggagctgaaaaa
gattcattgacattcttagcaaatcaccttggagccagtgttcaagaatacttcgttcgc
aagtccaatgcaaagaagggcatgtttgccagtacacatcttgttttgaaagagccaggt
ggttctaaatatgaagctgccaagaagtggaatttaccagcagtcactatagcttggctg
ttagagtctgctagattgggaaagagagcaaatgaaaaccatttcctgattgaaaattca
tctaaagaagaacaaagtttggaaactgaaacaacaaatgaggtgaatctaaatccagat
actccagagcatcctgtaacacatctggaaactcagagaaaaacagccgttacaccttta
gatatgaaccgctttcagagtaaagctttccgcacggtgatgtcacagcactccggacag
gcttcagtctccccttccccaggacagtcacttcagaaggagccctcattacacctggat
acgccgtcaaagtttctgtccaaggacaaactgttcaagccttcctttgatgtgaaggat
gctctcgcagccttggaaactccaggaggtcccagccagcagaaaaggaaactgagtaca
ccactctcagaagtcatcgtcaaaaacctgaaacttgctttggcaaatagctctcgaaat
gctgttgctctttctgccagccctcaactgaaggatgcccattcagaaaaggaagatgct
ccgaagccacttgagaacgttgtggtgtgtgttagtaagaaactcagtaagaagcagagt
gaactaaatgggattgcggcctctctaggtgcagactacaggtggagttttgatgagaca
gtgactcatttcatctatcaaggacgaccaaatgacactaatcgggagtataaatctgta
aaagaaagaggagtacacattgtttcagagcactggcttttagagtgtgcccaggagtat
aaacatcttcccgaatctctttatccacatacttacaatcccaaaatgagcttggacatc
agtgcagtgcaagatggccgactctgtaataaccgactactttcagctggctctgcagtg
agggatgatgagccagatcatatgcctctagaagaaaatgatatagacaatatgaccacc
agtaataaagaactaacaacatcaaatggaaatgggaggaatgactctaaaggagctctg
acacagactttggagatgagagagaactttcaaaagcagcttcaggagataatgtctgca
acttcaatagtgaaaccccaagggcagaggacttccctctcaagaagtggttgtaacagt
acctcttcaactcctgacagcacccgctctgcccgcagtggacgaagtagagtcctagag
gcactgaggcagtctcgtcaaacagtacctgatgtcaacacagagccctcccaaaatgaa
cagatcatttgggatgaccctacagccagggaggagagagcaagacttgccagcaattta
cagtggcctagttgtcccacacaatactctgagcttcaggttgatgttaaaaaactggag
gattctcctttccaggagcctttacatgattcagaaattgctgaacaggctgtctgtgat
cctgggaacgtatgtgtgaccggagccccaaaacacccgatctctgaagaactggaagct
ccagtgaaagacagccacctgatccctacgcctcaagcccccagtattgccttcccccta
gccaacccacctgtggctccacaccctagagaaaagattataacaatagaggagactcat
gaagacttaaaaaaacagtacatatttcagttgtcatctctgaatcctcaagaacgtatt
gattattgtcatctgattgaaaaactaggtggatcagtgattgagaagcagtgctttgat
cccagctgtacacacattgttgtggggcatccacttcgcaacgagaagtatttagcctcc
gtggcagcgggaaagtgggtactccatcgctcctaccttgaagcttgcaggactgctggg
cgcttcatgtcggaagaagactatgagtggggaagtagttccatacttgatgttttgact
ggaatcaatgtacagcaacgaaaactagcacttgcagcaatgagatggaggaaaaaaatc
cagcaaagacaagaatcaggcattactgagggggcatttagcgggtggaaagttatttta
catgttgatcagtcccgagaatcaggattcaaacgcctacttcagtcaggaggagcaaag
gtgctgcctggttattctgtatctttatttaaagaagctacacatctcttttctgacttt
aataaacagaaaccagatgactcaggagttaatatagcagaagctgctgcccagaatgta
tactgcttgaaaacagaatacattgctgattttcttatgcaggaatcccctcctcaagta
gaaaattactgtctaccagaagctgcttcatttcttcagaataaaaaggaacctgggcct
ggattctcacaaaagaggaaagctcctgcagaaaaaaataaaatcaaacgacccagagta
cagtaa
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integrated database retrieval system
