KEGG   Bison bison bison (American bison): 104988346
Entry
104988346         CDS       T08726                                 
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
bbis  Bison bison bison (American bison)
Pathway
bbis03040  Spliceosome
bbis04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bbis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104988346 (PRPF19)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104988346 (PRPF19)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bbis03041]
    104988346 (PRPF19)
   04121 Ubiquitin system [BR:bbis04121]
    104988346 (PRPF19)
   03400 DNA repair and recombination proteins [BR:bbis03400]
    104988346 (PRPF19)
Enzymes [BR:bbis01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104988346 (PRPF19)
Spliceosome [BR:bbis03041]
 Complex B
  Other components
   Prp19 complex
    104988346 (PRPF19)
 Complex C
   Prp19-CDC5 complex
    104988346 (PRPF19)
Ubiquitin system [BR:bbis04121]
 Ubiquitin ligases (E3)
  U-box type E3
   104988346 (PRPF19)
DNA repair and recombination proteins [BR:bbis03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    104988346 (PRPF19)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st WD40_WDHD1_1st Prp19 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR36-Utp21_1st DSE1_N ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_Aladin Beta-prop_NOL10_N Beta-prop_EIPR1 Beta-prop_TEP1_C CFAP251_N NBCH_WD40 Beta-prop_WDR41 Beta-prop_HPS5 ASA1 WDR90_beta-prop_4th Beta-prop_Vps41 U-box PEP5_VPS11_N Beta-prop_DCAF4 PAC11 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_SPT8 DNAI3_WD PROPPIN Beta-prop_Nup120_160 Beta-prop_ACSF4 Cytochrom_D1 RMC1_N Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 zf-Nse TRM82_WD Alpha_humulene_synt DUF1830 CCDC13 ATG16 Cep57_MT_bd
Other DBs
NCBI-GeneID: 104988346
NCBI-ProteinID: XP_010837936
Ensembl: ENSBBBG00000020749
UniProt: A0A6P3H7B0
LinkDB
Position
Unknown
AA seq 504 aa
MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP
IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKA
TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTG
GADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQ
VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP
DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD
LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTG
VAFGHHAKFIASTGMDRSLKFYSL
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgtctctgatctgctctatctccaatgaagtgccagaacacccctgtgtgtcccccgtt
tctaatcatgtgtatgagcggcggctcattgagaagtatattgcagagaacggcacagat
cccatcaacaaccagcctctgtccgaggagcagctcattgatatcaaagttgctcaccca
atccggcccaagcctccctcagccaccagcatcccagccattctgaaagccttgcaggat
gagtgggatgcggtcatgctccacagcttcaccctgcgccagcagctgcagaccacccgc
caggagctgtcccacgctctgtaccagcacgatgccgcctgccgtgtcattgcgcgtctc
accaaggaagtcactgctgcccgagaagctctggcgaccctgaaacctcaggccggtctc
attgtgccccaggctgtgccaagctcccagccaagtgttgtgggtgcaggcgagccaatg
gatttgggcgaactggtgggaatgactcctgagattattcagaagcttcaagacaaggcc
accgtgctcaccacagaacggaagaagagagggaagactgtgcctgaggagctggtgaag
ccagaagagctcagcaaataccgacaggtggcatcacatgtggggctgcacagtgctagc
attcccgggatcctcgccctggacctctgcccctccgacaccaacaagatcctcactggt
ggggcggataagaatgtcgtcgtcttcgacaagagttctgagcagattttggccaccctc
aaaggccataccaagaaggtcaccagcgtggtctttcacccgtcccaggagctggtgttt
tctgcctcccctgatgctactatcaggatttggtcggttccgaacgcctcttgcgtacag
gttgttcgtgcccacgagagcgctgtgacaggcctcagcctccacgccactggtgactat
ctcctgagctcctctgatgaccagtactgggccttttctgacatccagacaggacgtgtg
ctcaccaaggtgaccgatgagacctctggatgctctctcacctgtgcgcagttccaccct
gatggactcattttcgggacaggaaccatggactctcagatcaagatctgggacttgaag
gagcgcaccaatgtggccaacttccctggccactcgggccccatcaccagcattgccttc
tcggagaacggctactacttggctacagcggccgatgactcctctgttaaactctgggat
ctgcgcaaacttaagaactttaagacgttgcaactggataacaactttgaggtgaagtca
ctgatctttgaccagagcggtacttacctggctcttggcggcaccgatgtccagatctac
atctgtaaacagtggacggagattcttcactttacagagcacagtggcctgaccacaggg
gtggccttcggacaccacgccaagttcattgcttccacgggaatggaccggagcctcaaa
ttctacagcctgtag

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