Bison bison bison (American bison): 104988442 Help Entry 104988442         CDS       T08726                                  Symbol COL1A2 Name (RefSeq) collagen alpha-2(I) chain   KO K06236   collagen type I alpha Organism bbis  Bison bison bison (American bison) Pathway bbis04151   PI3K-Akt signaling pathway bbis04510   Focal adhesion bbis04512   ECM-receptor interaction bbis04611   Platelet activation bbis04820   Cytoskeleton in muscle cells bbis04926   Relaxin signaling pathway bbis04933   AGE-RAGE signaling pathway in diabetic complications bbis04974   Protein digestion and absorption bbis05146   Amoebiasis bbis05165   Human papillomavirus infection bbis05205   Proteoglycans in cancer bbis05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:bbis00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     104988442 (COL1A2)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104988442 (COL1A2)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     104988442 (COL1A2)   09142 Cell motility    04820 Cytoskeleton in muscle cells     104988442 (COL1A2)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     104988442 (COL1A2)   09152 Endocrine system    04926 Relaxin signaling pathway     104988442 (COL1A2)   09154 Digestive system    04974 Protein digestion and absorption     104988442 (COL1A2)  09160 Human Diseases   09161 Cancer: overview    05205 Proteoglycans in cancer     104988442 (COL1A2)   09172 Infectious disease: viral    05165 Human papillomavirus infection     104988442 (COL1A2)   09174 Infectious disease: parasitic    05146 Amoebiasis     104988442 (COL1A2)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     104988442 (COL1A2)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     104988442 (COL1A2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:bbis00536]     104988442 (COL1A2) Glycosaminoglycan binding proteins [BR:bbis00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104988442 (COL1A2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  104988442 NCBI-ProteinID:  XP_010838069 Ensembl:  ENSBBBG00000018468 UniProt:  A0A6P3HFZ4 LinkDB All DBs Position Unknown AA seq 1364 aa AA seqDB search MLSFVDTRTLLLLAVTSCLATCQSLQEATARKGPSGDRGPRGERGPPGPPGRDGDDGIPG PPGPPGPPGPPGLGGNFAAQFDAKGGGPGPMGLMGPRGPPGASGAPGPQGFQGPPGEPGE PGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGH NGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGP VGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEVGLPGLSGPVGPPGNPGA NGLPGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGE PGAVGQPGPPGPSGEEGKRGSTGEIGPAGPPGPPGLRGNPGSRGLPGADGRAGVMGPAGS RGATGPAGVRGPNGDSGRPGEPGLMGPRGFPGSPGNIGPAGKEGPVGLPGIDGRPGPIGP AGARGEPGNIGFPGPKGPSGDPGKAGEKGHAGLAGARGAPGPDGNNGAQGPPGLQGVQGG KGEQGPAGPPGFQGLPGPAGTAGEAGKPGERGIPGEFGLPGPAGARGERGPPGESGAAGP TGPIGSRGPSGPPGPDGNKGEPGVVGAPGTAGPSGPSGLPGERGAAGIPGGKGEKGETGL RGDIGSPGRDGARGAPGAIGAPGPAGANGDRGEAGPAGPAGPAGPRGSPGERGEVGPAGP NGFAGPAGAAGQPGAKGERGTKGPKGENGPVGPTGPVGAAGPSGPNGPPGPAGSRGDGGP PGATGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGRSGETGASGPPGF VGEKGPSGEPGTAGPPGTPGPQGLLGAPGFLGLPGSRGERGLPGVAGSVGEPGPLGIAGP PGARGPPGNVGNPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNAGPVGAAGA PGPQGPVGPVGKHGNRGEPGPAGAVGPAGAVGPRGPSGPQGIRGDKGEPGDKGPRGLPGL KGHNGLQGLPGLAGHHGDQGAPGAVGPAGPRGPAGPSGPAGKDGRIGQPGAVGPAGIRGS QGSQGPAGPPGPPGPPGPPGPSGGGYEFGFDGDFYRADQPRSPTSLRPKDYEVDATLKSL NNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTGET CIRAQPEDIPVKNWYRNSKAKKHVWVGETINGGTQFEYNVEGVTTKEMATQLAFMRLLAN HASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKKTN EWQKTIIEYKTNKPSRLPILDIAPLDIGGADQEIRLNIGPVCFK NT seq 4095 nt NT seq  +upstreamnt  +downstreamnt atgctcagctttgtggatacgcggactttgttgctgcttgcagtaacttcgtgcctagca acatgccaatccttacaagaggcaactgcaagaaagggcccaagtggagatagaggacca cgcggagaaaggggtccaccaggcccaccaggcagagatggtgatgacggcatcccaggc cctcctggcccccctggccctcctggcccccctggtcttggcgggaactttgctgctcag tttgatgcaaaaggaggtggccctggaccaatggggctgatgggacctcgcggccctcct ggggcctctggagcccctggccctcaaggtttccagggacctccgggtgagcctggtgaa cctggtcagactggtcctgctggtgctcgtggcccgcctggccctcctggcaaggctggt gaggatggtcaccctggaaaacctggacgacctggtgagagaggggttgttggaccacag ggtgctcgtggctttcctggaactcctggactccctggcttcaagggcattaggggtcac aatggtctggatggattgaagggacagcctggtgctccaggtgtgaagggtgaacctggt gcccctggtgaaaatggaactccaggtcaaacgggagcccgtggtcttcctggtgagaga ggacgcgttggtgcccctggcccagctggtgcccgtggaagtgatggaagtgtgggtcct gtgggccctgctggtcccattgggtctgctggccctccaggcttcccaggtgctcctggc cccaagggtgaacttggacctgttggtaaccctggccctgctggtcccgcgggtccccgt ggtgaagtgggtctcccaggcctttctggccctgttggacctcctggaaaccccggagcc aatgggcttcctggcgctaagggtgctgctggccttcccggtgttgctggggctcccggc ctccctggaccccggggtattcctggccctgttggcgctgctggtgctactggcgccaga ggacttgttggtgagcccggcccagctggttcgaaaggagagagcggcaacaagggcgag cctggtgctgttgggcagccaggtcctcctggccccagtggtgaagaaggaaagagaggc tccactggagaaatcggacccgctggccccccaggacctcctgggctgaggggaaatcct ggctcccgtggtctacctggagctgacggcagagctggtgtcatgggtcctgctggtagc cgtggtgcaactggccctgctggtgtgcgaggtcccaatggagattctggtcgccctgga gagcctggcctcatgggaccccgaggtttcccaggttcccctggaaatatcggcccagct ggtaaagaaggtcctgtgggtctccctggtattgacggtagacctggacccattggccca gcgggagcaagaggagagcctggcaacattggattccctggacccaaaggccccagtggt gatcctggcaaagctggtgaaaaaggtcatgctggtcttgctggtgctcggggcgctcca ggtcccgatggcaacaacggtgctcagggaccccctggactacagggtgtccaaggtgga aaaggtgaacagggtcctgctggtcctccaggcttccagggtctgcctggccctgcaggc acagctggtgaagctggcaaaccaggagaaaggggtatccctggtgaatttggtctccct ggccctgctggtgcaagaggggagcgggggcccccaggtgaaagtggtgctgctgggcct actgggcctattggaagccgaggtccttctggacccccagggcctgatggaaacaagggt gaaccgggtgtggttggcgctccaggcactgctggcccgtctggtcctagcggactccca ggagagaggggtgcggctggcattcctggaggcaagggagaaaagggtgaaactggtctc agaggtgacattggtagccctggtagagatggtgctcgtggtgctcctggtgctattggt gctcctggccctgctggagccaatggggaccggggtgaagctggtcccgctggccctgct ggccctgctggtcctcgtggtagccctggtgaacgtggtgaggtcggtcccgctgggccc aacggatttgctggtcctgctggtgctgctggtcaacctggtgctaaaggagagagagga accaaaggacccaagggtgaaaatggtcctgttggtcccacaggccccgttggagctgcc ggtccgtctggtccaaatggcccacctggtcctgctggaagtcgtggtgatggagggccc cctggggctactggtttccctggtgctgctggacggactggtccccctggaccctctggt atctctggcccccctggcccccctggtcctgctggtaaagaagggcttcgtgggcctcgt ggtgaccaaggtccagttggtcgaagtggagagacaggtgcctctggccctcctggcttt gttggtgagaagggtccctctggagagcctggtactgctgggcctcctggaaccccaggt ccacaaggccttcttggtgctcctggttttctgggtctcccaggctctagaggtgagcgt ggtctaccaggtgtcgctggatctgtgggtgaacctggccccctcggcatcgcaggccca cctggggcccgtggtccccctggtaatgtcggtaatcctggcgtcaatggtgctcctggt gaagccggtcgtgacggcaaccctgggaatgacggtcccccaggccgcgatggtcaaccc ggacacaagggggagcgtggttaccccggtaatgcaggtcctgttggtgctgccggtgct cctggccctcaaggccctgtgggtcccgttggtaaacacggaaaccgtggtgaaccaggt cctgccggtgctgttggtcctgctggtgccgttggcccaagaggtcccagtggcccacaa ggtattcgaggtgacaagggagagcctggtgataagggtcccagaggtcttcctggctta aagggacacaatgggttgcaaggtctcccgggtcttgctggtcatcatggcgatcaaggt gctcccggtgctgtgggtcccgctggtcccaggggccctgctggtccttctggccccgct ggcaaagacggtcgcattggacagcctggtgcagtcggacctgctggcattcgtggctct cagggtagccaaggtcctgctggccctcctggtccccctggccctcctggacctcccggc ccaagtggtggtggttacgagtttggttttgatggagacttctacagggctgaccagcct cgctcaccaacttctctcagacccaaggattatgaagttgatgctactctgaaatctctc aacaaccagattgagacccttcttactccagaaggctctaggaagaacccagctcgcaca tgccgagacttgagactcagccacccagaatggagcagtggttactactggattgaccct aaccaaggatgtactatggatgctatcaaagtatactgtgatttctctactggcgaaacc tgcatccgggctcaacctgaagacatcccagtcaagaactggtacagaaattccaaggcc aagaagcatgtctgggtaggagaaactatcaacggtggtacccagtttgaatataatgtt gaaggagtaaccaccaaggaaatggctacccaacttgccttcatgcgtctgctggccaac catgcctctcagaacatcacctaccattgcaagaacagcattgcatacatggatgaggaa actggcaacctgaaaaaggctgtcattctgcaaggatccaatgatgtcgaacttgttgcc gagggcaacagcagattcacttacactgttcttgtagatggctgctctaaaaagacaaat gaatggcagaagacaatcattgaatataaaacaaacaagccatctcgcctgcctatcctt gatattgcacctttggacatcggtggcgctgaccaagaaatcagattgaacattggccca gtctgtttcaaataa

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