Bison bison bison (American bison): 104988813
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Entry
104988813 CDS
T08726
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis00100
Steroid biosynthesis
bbis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
104988813 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bbis01006
]
104988813 (FDFT1)
Enzymes [BR:
bbis01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
104988813 (FDFT1)
Prenyltransferases [BR:
bbis01006
]
Terpene biosynthesis
Squalene/phytoene synthase
104988813 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Motif
Other DBs
NCBI-GeneID:
104988813
NCBI-ProteinID:
XP_010838568
Ensembl:
ENSBBBG00000006569
UniProt:
A0A6P3H532
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MEFVKCLGHPEEFYNLLRFQMGGRRKVIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQA
LDGEMRHAVCIFYLVLRALDTLEDDMTISIERKVPLLHNFHSYLYEPDWRFTESKEKDRQ
VLEDFPTISLEFRNLAEKYQTVIVDVCQKMGFGMAEFLDKRVTSEQEWDKYCHYVAGLVG
IGLSRLFSASELEDPLIGEDTERANSMGLFLQKTNIIRDYLEDQREGREFWPQETWSKYV
KKLGDFAKPENIDLAVQCLNELITNTLHHIPDVITYLSRLRNQSIFNFCAIPQVMAIATL
AACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYMEEIYHRIPNSDPCSTKTQ
QIISTIRTQNLPNCQLVSRSHYSPIYLSFVMLLAALSWQYLSTLSQVTEDYVQTGEH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgtgaagtgcttggggcaccctgaggagttctacaaccttctgcgcttccag
atggggggccggcggaaggtgatacccaaaatggaccaggactcgctcagcagcagcttg
aaaacatgctacaagtacctgaatcagaccagtcgcagtttcgcagctgttatccaggcg
ctggatggggaaatgcgccatgcagtatgcatattttatctggttctccgagctttggac
acactggaagatgacatgactatcagtatagaaagaaaagtgccactgctacacaacttc
cactcatacctttatgagcctgactggcggttcacggagagcaaggaaaaggaccgacaa
gtcctggaggacttcccaacgatctccctggagtttcgaaatctggctgagaaatatcag
acagtgattgttgacgtttgccagaagatgggctttgggatggcggagtttctggataag
cgcgtgacgtctgaacaggagtgggacaagtactgtcactatgttgctgggctagtggga
attggcctctcccgtctcttctcggcctcggagttagaagaccccttaattggcgaagac
acagagcgagccaactctatgggccttttcctgcagaaaacaaacatcatccgtgattat
ctggaagaccagcgagaagggagagagttttggcctcaagagacttggagcaagtacgtg
aagaagctgggtgactttgctaagccagagaacattgacttggctgtgcagtgtctgaat
gaactcatcaccaacacactgcaccacatccccgacgtcatcacctacctgtcacgactt
cgaaaccagagtatttttaacttctgtgctattccacaggtcatggccattgctactttg
gctgcctgttacaataatcagcaggtgttcaagggggtggtgaagattcgaaaagggcaa
gcggtcaccctgatgatggatgccaccaacatgccagctgtaaaagccataatacaccag
tacatggaagagatttatcacagaattcccaactctgacccctgttccactaaaacacag
cagatcatctccaccatcaggacacagaatctccccaactgtcagctggtctcgcggagc
cactactcgcccatctacctgtcgttcgtcatgctcctggcggccctgagctggcagtac
ctgagcaccctgtcccaggtcacagaggactacgttcagaccggggagcactga
DBGET
integrated database retrieval system