KEGG   Bison bison bison (American bison): 104989012
Entry
104989012         CDS       T08726                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
bbis  Bison bison bison (American bison)
Pathway
bbis04512  ECM-receptor interaction
bbis04514  Cell adhesion molecule (CAM) interaction
bbis04820  Cytoskeleton in muscle cells
bbis05144  Malaria
bbis05205  Proteoglycans in cancer
bbis05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:bbis00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104989012 (SDC1)
   04514 Cell adhesion molecule (CAM) interaction
    104989012 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104989012 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    104989012 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    104989012 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    104989012 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bbis04131]
    104989012 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:bbis04090]
    104989012 (SDC1)
   00535 Proteoglycans [BR:bbis00535]
    104989012 (SDC1)
Membrane trafficking [BR:bbis04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    104989012 (SDC1)
CD molecules [BR:bbis04090]
 Proteins
  104989012 (SDC1)
Proteoglycans [BR:bbis00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   104989012 (SDC1)
SSDB
Motif
Pfam: Syndecan Romo1
Other DBs
NCBI-GeneID: 104989012
NCBI-ProteinID: XP_010838825
UniProt: A0A6P3HJU7
LinkDB
Position
Unknown
AA seq 283 aa
MPPEDQDGSGDDSDNFSGSGAGALPDITSSHTPSTWKDLGPVTTTATAPEPTSPDAIAAS
TTILPTGEQPEGGRAVLLAEVEPGLTAQKEATHPPSETTLHPTTHSVSTARATMAPGPAT
SHPHRDVQPDHHETSAPTGRGRMEPHRPHVEEGGPPATEKAAEEDPSTQIPVGEGSGEQD
FTFDLSGENAAGAAVEPGSRNGAPEDPEATGATGASQGLLDRKEVLGGVIAGGLVGLIFA
VCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQKPTKQEEFYA
NT seq 852 nt   +upstreamnt  +downstreamnt
atgccccccgaagatcaggatggctctggggacgacagtgacaacttctctggctcgggc
gcaggtgctttgccagatatcacctcatcacacacgccctccacctggaaggacctgggg
cccgtgacgaccacagccacggctccagagcccaccagcccagatgccatcgccgcctcc
accaccatcctgccaaccggagagcagcctgaggggggcagggcagtgctcctggcagag
gtggagcctggcctcaccgcccagaaggaggccacccacccacccagtgagaccacactg
cacccgaccactcacagcgtgtccacagccagagccaccatggccccaggacccgccacc
tcccatccgcacagggacgtgcagcccgaccaccatgagacctcggctcccacaggccgg
ggccgtatggagccgcacaggccccacgtggaggagggaggtcctcctgccactgagaag
gcggctgaggaggacccctccacccagatcccagtgggagagggctctggggagcaggac
ttcaccttcgacttgtccggggagaatgcggccggggccgcagtggaacctggctcacgg
aatggagccccggaggatcctgaggccacgggggctacgggggcctcacagggcctcctg
gatcggaaggaagtcctgggaggggtcattgctggaggcctcgtggggctcatctttgcc
gtgtgcttggtgggtttcatgctgtaccggatgaagaagaaggacgagggcagctactcc
ttggaggagccaaaacaagccaatggcggggcctaccagaagcccactaagcaggaggag
ttctacgcctga

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