Bison bison bison (American bison): 104989078
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Entry
104989078 CDS
T08726
Symbol
TRIM54
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104989078 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbis04121
]
104989078 (TRIM54)
Ubiquitin system [BR:
bbis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104989078 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-B_box
zf-RING_5
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_6
TRIM_CC
PHP
Sina_RING
CoiA_N
DUF349
Mod_r
DUF1421
Zn_ribbon_FGT1_2
DD_DDX21-DDX50
MIF4G_like_2
FlgN
DUF5799
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
104989078
NCBI-ProteinID:
XP_010838932
Ensembl:
ENSBBBG00000002599
UniProt:
A0A6P3HHS0
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRSSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEENSRRQKQLLNQRFEGLCAVLEERKGELLQALAREQE
EKLQRVXGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELAG
RPEPGYERMDQFTVSVEHVAEMLRTIDFQPGTSGEEEDEEVAVEGEEGNAGPEEERTDGR
ESTGQH
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacggtgggtttcaagccgctgctaggggatgcacacagcatggacaacctg
gagaagcagctcatttgccccatctgcctggagatgttctccaaaccggtggtgatccta
ccctgccagcacaacctgtgccgcaagtgcgccaatgatgtcttccaggcctcgaaccct
ctgtggcagtcccggagctccaccaccgtgtcttcggggggccgtttccgctgcccatct
tgcaggcatgaggtggtcctggaccgacatggcgtctacggcctgcagcggaacctgctg
gtggagaacattatcgacatttacaagcaggagtcctcccggccactgcattccaaggct
gagcagcacctcatgtgtgaggagcatgaagatgagaagatcaatatctactgtctgagc
tgtgaagtgcccacctgctctctctgcaaggtctttggtgcccacaaggactgtgaggtg
gccccactgcccaccatttacaaacgccagaagagtgagctcagcgatggcatcgcgatg
ctggtggcgggcaatgaccgtgtgcaagcagtgatcacacagatggaggaggtgtgccag
accatcgaggaaaacagccggaggcagaagcagttgctgaaccagaggtttgagggcctg
tgtgcagtactggaggagcggaagggtgagctgctgcaggcgctggcccgggagcaggag
gagaagctgcagcgagtcnagggcctcatccgccagtacggagaccacctggaggcctcc
tctaagctggtggagtctgccatccagtccatggaggagccgcagatggcactctacctg
cagcaggccaaggagttgatcaataaggtcgggacgatgtcgaaggtggagctggctggc
cggccagagccgggctatgaaagaatggatcaattcaccgtgagtgtggagcatgtggcc
gaaatgctgaggaccatcgacttccagccaggcacttctggggaggaagaggatgaggag
gtcgcggtagaaggggaagagggcaacgcaggaccagaggaagagcggaccgatgggcgg
gaaagcacaggccagcactga
DBGET
integrated database retrieval system
