Bison bison bison (American bison): 104989236
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Entry
104989236 CDS
T08726
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03082
ATP-dependent chromatin remodeling
bbis04714
Thermogenesis
bbis05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104989236 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
104989236 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
104989236 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbis03000
]
104989236 (ARID1B)
03021 Transcription machinery [BR:
bbis03021
]
104989236 (ARID1B)
03036 Chromosome and associated proteins [BR:
bbis03036
]
104989236 (ARID1B)
Transcription factors [BR:
bbis03000
]
Eukaryotic type
Helix-turn-helix
ARID
104989236 (ARID1B)
Transcription machinery [BR:
bbis03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104989236 (ARID1B)
Chromosome and associated proteins [BR:
bbis03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104989236 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
104989236
NCBI-ProteinID:
XP_010839160
Ensembl:
ENSBBBG00000011875
UniProt:
A0A6P3HKX5
LinkDB
All DBs
Position
Unknown
AA seq
1925 aa
AA seq
DB search
MEIAALQEHLSSFSHFPTYDSRADLTPQAGTHRGTSDIVTWTSYWNCSFNMRKSEGSHPP
GRVDLLLLRHAAGSTGVLPPVKPPLPPVFYHSQGSPMDPMVMKRPQLYGMGSNPHSQPQQ
SSPYPGGSYGPPGPQRYPIGIQGRPPGAMGGMQYPQQQMPPQYGQQGVSGYCQQGQQPYY
NQQPQPPHLPPQAPYLPSQSQQRYQPQQDMSQEGYGTRSQPPLASGKPNHEDLNLIQQER
PSSLPVEVLTSEDTAFGLKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPF
SPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPA
LSQSPMPQERGFMAGTQRNPQMSQYGPQQTGPSMSPHPSPGGQMHPGISSFQQSNSSGTY
GPQMSQYGPQGNYSRPPTYSGVPSASYSGPGPSMGVNANSQMHGQGPSQPCGAMPLGRVP
SAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSR
PPYIRSPAYPSQSGAGGRPMFSSQHPNYGNSQAPMMHQPDQYGQGGFPGMNQSGLMASSS
PYSQPMNNSSGLMNTQAPPYSMTPNMVNSSTASMGLADMMSPSESKLPLPLKADGKEEGS
AQPEGKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPGWPKTPSS
PKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLY
VCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPP
EVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMT
PVQGGRSSTVSVHDPFSDASESSFPKRNSMTPSTPYQQGMSMPDVMGRMPYEPNKDPFGG
MRKVPGSSEPFMTQGQMPTSSMQDMYNQSPSGAMSSLGMGPRQQFPYGTSYDRRHEPYGQ
QYPGQGPPSGQPSYGGHQPGLYPQQTNYKRHMDGMYGPPAKRHEGDMYNMQYGSQQQEMY
NQYGSSYSGPDRRPLQGQYPYPYNRERMQGPGQIQPHAIPPQMMGGPMQSSSSEGPQQSM
WATRNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMS
SSASMQPITRPPQSSYQTPPSLPNHISRAPSPASFQRSLESRMSPSKSPFLPSMKMQKVM
PTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRVMMSLK
SGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILTEYEVG
DPSQKALDHNAAKRDDSQSLADDSGREEEDAECIEEEEDEEDEEEEDSGRAETEDRSSAA
VASPDATTDLKEKPRQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFSSGLLHWQLGGG
DTTEHIQTHFESKMEIPPRRRPPPTLSSTGRKKDQEGKGDSDEHQEKSIIATIDDVLSAR
PGALPEDANPGTQTESSKFPFGIHQARSHRNIKLLEDEPRSRDEAPLCTIAHWQDSLAKR
CICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKG
VACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQ
DPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKN
PVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQP
PPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLF
QIGQL
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgctgccctccaggagcacctgtcctcgttctcccacttccctacttacgac
tcgagggcagacctgactccccaggctggaacacatcgtggcacttctgatattgtcacc
tggacttcctattggaattgcagttttaacatgcggaagagtgaaggctcccacccccca
gggagggtggatctgcttctactccggcacgctgctggctcaaccggtgtcttaccacct
gttaagccacccttgccacctgtcttctatcattcccagggcagcccaatggatcccatg
gtgatgaagagaccccagctgtatggcatgggcagtaaccctcattctcagccacagcag
agcagcccttaccctggaggttcctatggccccccaggcccacagaggtatccaatcggc
attcaaggtcggcccccgggggccatgggaggcatgcagtacccccagcagcagatgcca
cctcagtacggacagcagggtgtgagtggttactgccagcagggccagcagccttactac
aaccagcagccgcagcctccgcaccttcccccgcaggcgccatatctgccctcccagtcc
cagcagaggtaccagccgcagcaggatatgtctcaggaaggctatggaactaggtctcaa
cctcctctggcttctggaaaacctaaccatgaagacttgaacttaatacaacaagaaaga
ccatcaagtttaccagttgaagtcttgacctcggaggatactgcctttggactcaaggac
ctgtctggctccattgatgacctccccacgggaacggaagcaactttgagctcagcagtc
agtgcatctgggtccacaagcagccaaggagatcagagcaacccagctcagtcacctttc
tctccgcatgcatctccccatctctccagcatccctgggggcccatcgccttctcctgtc
ggctctcctgtaggaagtaaccagtcacgatctggcccaatttctcctgccagtattcca
ggaagtcagatgccccctcagccacctgggagccagtcagaatccagttctcatcctgcc
ttgagccagtcaccaatgccacaggaaagaggttttatggcaggcacacaaagaaaccct
cagatgtctcaatatggacctcagcagacaggaccatccatgtcgcctcatccttctcct
ggaggccagatgcaccctggaatcagtagctttcagcagagtaactcaagtggaacttac
ggtccacagatgagccagtatggaccacaaggtaactactccagacccccaacatacagt
ggggtgcccagtgcaagctacagcggcccagggcccagcatgggcgtcaatgccaacagc
cagatgcatggacaagggccgagccagccgtgtggtgccatgcccctgggacgagtgcca
tccgcaggcatgcagaacagaccatttcctggaaacatgagcagcatgacccccagttct
cctggcatgtctcagcagggggggccaggaatggggccaccaatgccaaccgtgaaccgt
aaggcacaggaggcagctgctgcagtgatgcaggccgctgcgaactcggcgcagagcagg
ccaccatacattaggtcgcctgcttatcccagccagtctggggctggcggacgccccatg
ttttcttcccagcaccccaactatggcaactctcaggctcccatgatgcaccagcctgac
cagtacgggcaaggcggctttcctggcatgaatcagagtggactcatggcttccagctca
ccctacagccagcccatgaacaacagctctgggctaatgaacacccaggcgcccccctac
agcatgacgcccaatatggtgaacagctcaacagcatctatgggtcttgcagatatgatg
tctcctagtgaatccaaactgcccctgcccctcaaagccgacggtaaagaagaaggcagc
gcacagccggagggcaagtcgaaggatagctacagctctcagggtatttctcagccccca
acccccggcaacctgccagtcccttccccaatgtcccccagctctgctagcatctcctca
tttcatggagatgaaagtgatagcattagcagcccaggctggccaaagactccatcaagc
cctaagtccagctcatccaccaccactggggaaaagatcacaaaggtgtatgagctgggg
aatgagccagagaggaagctgtgggtggaccgctacctcaccttcatggaggagaggggc
tccccggtctcaagtctgcctgcagtgggcaagaagcccttggacctcttccgactctat
gtctgcgtcaaagagatcggaggtttggcacaggttaataaaaacaagaagtggcgtgag
ctggcaaccaacctaaatgttggcacttcgagcagtgcagcaagctccctgaaaaagcag
tatattcagtacctgtttgcctttgagtgcaagatcgagcgtggggaggagcccccgccg
gaagtcttcagcacgggcgacaccaagaagcagcccaagctccagccgccatctcctgct
aactcaggatccttgcaaggtccacagaccccccagtcaactggcagtaattcgatggca
gaggttccaggtgacctgaagccgcctactccagcctccacccctcatggacagatgacc
ccagtgcaaggtggaagaagcagcactgtcagtgtgcacgacccattctcagacgcaagt
gagtcatcgttccccaaacgcaactccatgactccaagcaccccgtaccagcagggcatg
agcatgccagacgtgatgggcaggatgccctatgagcccaacaaggacccctttgggggg
atgaggaaagtgcctggaagcagcgagcctttcatgacgcaaggacagatgcccaccagc
agcatgcaggatatgtacaaccagagtccgtctggagccatgtctagtcttggcatgggg
ccacggcagcagtttccctacggaaccagttacgaccgaaggcatgaaccttatgggcag
cagtacccgggccaaggccctccctcaggacagccgtcatatggaggacaccagccaggc
ctgtacccacagcagacgaactacaagcgccatatggatggcatgtatgggcctccagcc
aaacgccacgagggagacatgtacaacatgcagtatggcagccagcagcaggagatgtac
aaccagtacgggagctcctactccggcccggaccggaggcccttgcagggacagtatcct
tacccctacaaccgagagaggatgcagggcccggggcagatacagccacatgccatccct
ccgcagatgatgggcggcccgatgcagtcgtcctccagcgaagggcctcagcagagcatg
tgggcgacccgcaacgatatgccttatccctaccagaacaggcaaggccctggcggcccc
acgcaggccccgccttaccccggcatgaaccgcaccgatgacatgatggtccctgatcag
aggataaaccacgagagccagtggccttcccacgtcagccagcgtcagccttacatgtcc
tcgtcagcctccatgcagcccatcacgcgcccgcctcagtcgtcctaccagacgccaccc
tcactgccaaaccacatctccagggcgcccagccctgcctccttccagcgctccctggag
agccgcatgtctcccagcaagtcccccttcctcccctccatgaagatgcagaaggtcatg
cccaccgtccccacgtcccaggtcaccgggccacccccccagccgccccccatcagaagg
gagatcaccttccctcctggctccgtggaagcctcacagccagtcctgaaacaaaggcgg
aagattacctcaaaagatatcgttactccagaggcctggcgtgtgatgatgtcccttaag
tcaggtctcttggctgaaagtacttgggctttggacactattaatattcttctctatgac
gacagcactgtcgctactttcaatctctcccagttgtccggatttctcgaacttttagta
gagtatttcaggaaatgcttgattgacatttttggaattcttacggaatatgaagtggga
gaccccagccaaaaagcacttgatcacaatgcagcaaagagagatgacagccagtcctta
gccgacgattctgggagagaggaagaagatgctgaatgtattgaggaggaggaggatgag
gaggacgaggaggaggaagacagcgggagggcggagacggaggacaggagcagtgcagct
gtggcctcccccgatgccaccacagatctaaaggagaagcccaggcaagccagtaaattt
gacaagctgccaatcaagatagtcaaaaagaacaacctgtttgtcgtcgaccgctctgac
aagctgggtcgcgttcaggagttcagcagtggacttctgcactggcagctcggcggggga
gataccactgagcacatccagactcacttcgagagcaagatggagattcctcctcgcagg
cggccgcctcccactttgagctccacaggcagaaagaaagaccaggaaggcaaaggggat
tctgacgagcaccaagagaaaagcatcatcgcaaccattgatgatgtcctatctgctcgg
ccaggggctctgcccgaagacgcaaaccctggtacccagaccgaaagcagcaagtttccc
tttggaatccatcaagccagaagtcaccgcaacatcaagctgctggaggacgagccaagg
agccgggacgaggccccgctctgcaccatcgcacactggcaggactcgctggccaagcgc
tgcatctgcgtgtccaatattgtccggagcttgtcttttgtgcctgggaatgacgcggaa
atgtccaaacacccgggcctggtgctgatcctggggaagctgattcttcttcaccacgag
catcccgagagaaaacgagcaccgcagacctacgagaaggaggaagacgaggacaaaggg
gtggcctgcagcaaagatgagtggtggtgggactgcctcgaggtcttaagggacaacacg
ctggtcaccttggccaacatttctgggcagctagacttgtccgcttacacggaaagcatc
tgcttgccaattttggatggcttgctgcactggatggtgtgcccatcagcagaggcacaa
gacccctttcccacggtgggacccaactctgtcctgtcgcctcagagactcgtgctggag
acgctctgtaaactcagcatccaggacaacaatgtggacctgatcttggccacgcctccg
tttagtcgtcaggagaaattctatgccacgttagttaggtacgttggggatcgcaaaaac
ccagtctgtcgagaaatgtccatggcgcttttatcgaaccttgcccaaggggacgcactg
gctgcaagggccatagctgtccagaagggaagcatcggaaacttgataagcttcctagag
gatggggtcacaatggcccagtatcagcagagccagcacaacctcatgcacatgcagccc
ccgcccctagagccccctagcgtggacatgatgtgcagggcagccaaggctctgctggcc
atggccagagtggacgagaaccgctccgagttccttctgcacgagggccgattgctggat
atctcaatatcagccgttctgaactctctggtggcatctgtcatctgcgatgtactgttt
cagatcgggcagttatga
DBGET
integrated database retrieval system
