Bison bison bison (American bison): 104989302
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Entry
104989302 CDS
T08726
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104989302 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbis03019
]
104989302 (CNOT6)
Enzymes [BR:
bbis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
104989302 (CNOT6)
Messenger RNA biogenesis [BR:
bbis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104989302 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104989302 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
104989302
NCBI-ProteinID:
XP_010839235
Ensembl:
ENSBBBG00000010762
UniProt:
A0A6P3HL48
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MPKEKYEPPDPRRMYTIMSSEEAANGKKSHWVELEISGKVRSLSSSLWSLTHLTALYLSD
NSLSRIPSDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTQDILNLYLEPDGTRRLLNYLLDNLAGTAKRIATEQPPPRSWIMLQEP
DRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQE
VETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEISSGKPHLGTEKQLILVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRSLQSSVLGEFGTIPLVLCADLNSLPDSG
VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYT
NYTFDFKGIIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLEL
LLPFLPQVNGIHLPGRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaaatacgagccccctgaccctcggaggatgtacacaattatgtcctct
gaggaagcagcaaatggaaagaaatctcattgggtggagcttgaaataagtggaaaagta
agaagcttaagctcatctttgtggtcactaactcacttgacagctttgtatctgagtgac
aattccctgtcccgcattccttcagacattgccaagcttcacaatctggtgtatctggac
ctgtcctctaataaaatccgaagtttaccagcagaactcggaaacatggtatcactcagg
gaactccatttaaataacaacctgttacgagttctaccttttgagctgggaaaactgttt
cagttgcagactttaggcctgaaaggaaatccacttacccaggacatattgaacctctat
ctggagccagatggaacaagaaggctactgaactatttgcttgataatttggcaggtact
gcaaaaagaattgcaacagaacagccacctccaagatcttggattatgttacaagaacca
gacagaacacggccaactgccttattttctgtcatgtgctataatgttctttgtgataaa
tatgcgacccggcagttatatggctactgtccatcatgggcactaaattgggactacagg
aaaaaggccattattcaagaaatcttgagttgcaatgctgatatcataagtcttcaggaa
gttgaaacagaacagtattacagtttttttctggtagaactgaaagaacgtggctacaac
ggattctttagtcctaaatctagagctaggacaatgtcagaacaagaaagaaaacatgtt
gatggctgtgcaatattctttaaaacagaaaaatttactttggttcagaaacacactgtt
gaatttaatcaactagccatggcaaattcagaagggtctgaagccatgctgaacagagtc
atgacaaaagataacataggagttgccgtactgctagagcttcgaaaggaattgattgaa
atatcatctggaaagccacatcttggaacagaaaagcagcttattcttgtggctaatgct
catatgcattgggaccctgaatactctgatgtgaagttggttcaaacgatgatgttcctc
tcagaagtgaagaatattattgataaagcctcgagaagtctccagtccagtgtattagga
gaatttggaactattccactagtgttatgcgcagatcttaattctttgccggactctggt
gttgtagaatatttgagcactggtggagtagaaacaaatcataaagactttaaggaactg
agatacaatgaaagtcttacaaacttcagctgtaatgggaaaaatgggacaaccaatgga
aggatcactcatggcttcaagttaaagagtgcctatgagagtggcctgatgccttacacc
aattacacatttgattttaagggtataattgactacatcttctattctaaacctcagctg
aacactttaggcatcctgggacctctggaccaccattggctagttgagaacaatatcagc
ggctgcccacacccactcatcccctctgaccacttctcactttttgcacaactggagctc
ttactgcctttcctgccccaggttaatggcattcaccttcctggcaggaggtag
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